myRT

myRT report for GCA_000784925.1_ASM78492v1

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Seq: CP009859.1 Escherichia coli strain ECONIH1, complete genome (5310511 bp)
Overview 1 RT 1: 2312455-2318318 bp 2 RT 2: 3488100-3493503 bp 3 RT 3: 4276470-4280352 bp Neighborhood of RT #1 [2312455, 2318332] PRK13381 DcuC RVT-GII Asparaginase_2 DUF5339 Neighborhood of RT #2 [3488100, 3493511] PFLE_PFLC RVT-GII RVT-GII GIIM YesM Neighborhood of RT #3 [4276470, 4280357] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 2312455-2313711 bp Ori: AIX63836.1 Feature: domain Description: PRK13381 Location: 2312461-2313676 bp Feature: domain Description: PRK1 3381 Location: 231 2461 -231 3676 bp Feature: gene Location: 2313708-2315069 bp Ori: AIX63837.1 Feature: domain Description: DcuC Location: 2313711-2315043 bp Feature: domain Description: DcuC Location: 231 371 1 -231 5043 bp Feature: gene Location: 2315715-2316161 bp Ori: AIX63838.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2316021-2316123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 231 6021 -231 61 23 bp Feature: gene Location: 2316694-2317716 bp Ori: AIX66626.1 Feature: domain Description: Asparaginase_2 Location: 2316775-2317708 bp Feature: domain Description: Asparaginase_2 Location: 231 6775-231 7708 bp Feature: gene Location: 2318054-2318332 bp Ori: AIX63839.1 Feature: domain Description: DUF5339 Location: 2318117-2318318 bp Feature: domain Description: DUF5339 Location: 231 81 1 7-231 831 8 bp Feature: gene Location: 3488100-3489017 bp Ori: AIX64859.1 Feature: domain Description: PFLE_PFLC Location: 3488136-3488991 bp Feature: domain Description: PFLE_PFLC Location: 34881 36-3488991 bp Feature: gene Location: 3489154-3490059 bp Feature: gene Location: 3490545-3491084 bp Ori: AIX64861.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3490875-3490953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3490875-3490953 bp Feature: gene Location: 3491151-3491633 bp Ori: AIX66686.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3491160-3491400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3491 1 60-3491 400 bp Feature: domain Description: GIIM Note: maturase Location: 3491448-3491628 bp Feature: domain Description: GIIM Note: maturase Location: 3491 448-3491 628 bp Feature: gene Location: 3491732-3491911 bp Feature: gene Location: 3492282-3493511 bp Ori: AIX64863.1 Feature: domain Description: YesM Location: 3492762-3493503 bp Feature: domain Description: YesM Location: 3492762-3493503 bp Feature: gene Location: 4276470-4276928 bp Ori: AIX65588.1 Feature: domain Description: dut Location: 4276476-4276923 bp Feature: domain Description: dut Location: 4276476-4276923 bp Feature: gene Location: 4277035-4277631 bp Ori: AIX65589.1 Gene: slmA Feature: domain Description: slmA Location: 4277041-4277617 bp Feature: domain Description: slmA Location: 4277041 -427761 7 bp Feature: gene Location: 4277677-4278636 bp Ori: AIX65590.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4277812-4278361 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 427781 2-4278361 bp Feature: gene Location: 4278934-4279575 bp Ori: AIX65591.1 Gene: pyrE Feature: domain Description: pyrE Location: 4278937-4279570 bp Feature: domain Description: pyrE Location: 4278937-4279570 bp Feature: gene Location: 4279641-4280357 bp Ori: AIX65592.1 Gene: rph Feature: domain Description: rph Location: 4279644-4280352 bp Feature: domain Description: rph Location: 4279644-4280352 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13381 (peptidase T; Provisional), DcuC (TIGR00771), RVT-GII, Asparaginase_2 (pfam01112), DUF5339 (pfam17274), PFLE_PFLC (TIGR02494), GIIM (pfam08388), YesM (COG2972), dut (TIGR00576), slmA (PRK09480)
RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)