myRT

myRT report for GCA_000784985.1_ASM78498v1

Download annotations/find similar RTs

Seq: CP009872.1 Klebsiella pneumoniae subsp. pneumoniae strain KPNIH30, complete genome (5306618 bp)
Overview 1 RT 1: 1315405-1318812 bp 2 RT 2: 1756752-1762300 bp 3 RT 3: 2144627-2150045 bp 4 RT 4: 3502207-3508690 bp Neighborhood of RT #1 [1315405, 1318913] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1756752, 1762326] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [2144627, 2150047] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [3502207, 3508692] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 1315405-1316136 bp Ori: AIX77921.1 Feature: domain Description: Laminin_G_3 Location: 1315726-1316080 bp Feature: domain Description: Laminin_G_3 Location: 1 31 5726-1 31 6080 bp Feature: gene Location: 1316133-1316342 bp Feature: gene Location: 1316795-1318279 bp Ori: AIX77923.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1317197-1317887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 31 71 97-1 31 7887 bp Feature: gene Location: 1318357-1318596 bp Feature: gene Location: 1318596-1318913 bp Ori: AIX77925.1 Feature: domain Description: PRK10276 Location: 1318602-1318716 bp Feature: domain Description: PRK1 0276 Location: 1 31 8602-1 31 871 6 bp Feature: domain Description: PRK10276 Location: 1318743-1318812 bp Feature: domain Description: PRK1 0276 Location: 1 31 8743-1 31 881 2 bp Feature: gene Location: 1756752-1757315 bp Ori: AIX78321.1 Feature: domain Description: YbjK Location: 1756758-1757295 bp Feature: domain Description: YbjK Location: 1 756758-1 757295 bp Feature: gene Location: 1757438-1758490 bp Ori: AIX78322.1 Feature: domain Description: int Location: 1757441-1758440 bp Feature: domain Description: int Location: 1 757441 -1 758440 bp Feature: gene Location: 1758909-1760393 bp Ori: AIX78323.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1759311-1760001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 75931 1 -1 760001 bp Feature: gene Location: 1760492-1761436 bp Feature: gene Location: 1761448-1762326 bp Ori: AIX78325.1 Feature: domain Description: Phage_CI_repr Location: 1761475-1761658 bp Feature: domain Description: Phage_CI_repr Location: 1 761 475-1 761 658 bp Feature: domain Description: Phage_CI_repr Location: 1761787-1761979 bp Feature: domain Description: Phage_CI_repr Location: 1 761 787-1 761 979 bp Feature: domain Description: Phage_CI_C Location: 1762006-1762300 bp Feature: domain Description: Phage_CI_C Location: 1 762006-1 762300 bp Feature: gene Location: 2144627-2145766 bp Ori: AIX78697.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 2144810-2145710 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 21 4481 0-21 4571 0 bp Feature: gene Location: 2145937-2146179 bp Ori: AIX78698.1 Feature: domain Description: DinI Location: 2145988-2146168 bp Feature: domain Description: DinI Location: 21 45988-21 461 68 bp Feature: gene Location: 2146797-2148281 bp Ori: AIX78699.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2147199-2147889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 471 99-21 47889 bp Feature: gene Location: 2148360-2148779 bp Ori: AIX78700.1 Feature: domain Description: PRK10276 Location: 2148363-2148774 bp Feature: domain Description: PRK1 0276 Location: 21 48363-21 48774 bp Feature: gene Location: 2148782-2150047 bp Ori: AIX78701.1 Feature: domain Description: umuC Location: 2148785-2150045 bp Feature: domain Description: umuC Location: 21 48785-21 50045 bp Feature: gene Location: 3502207-3503265 bp Ori: AIX80011.1 Feature: domain Description: YccC Location: 3502213-3503251 bp Feature: domain Description: YccC Location: 350221 3-3503251 bp Feature: gene Location: 3503364-3503837 bp Ori: AIX80012.1 Feature: domain Description: PRK10016 Location: 3503367-3503826 bp Feature: domain Description: PRK1 001 6 Location: 3503367-3503826 bp Feature: gene Location: 3503919-3505403 bp Ori: AIX80013.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3504321-3505011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3504321 -350501 1 bp Feature: gene Location: 3505924-3507087 bp Ori: AIX80014.1 Feature: domain Description: dacD Location: 3505927-3507082 bp Feature: domain Description: dacD Location: 3505927-3507082 bp Feature: gene Location: 3507268-3508692 bp Ori: AIX80015.1 Gene: sbcB Feature: domain Description: SbcB Location: 3507274-3508690 bp Feature: domain Description: SbcB Location: 3507274-3508690 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)