myRT

myRT report for GCA_000785005.1_ASM78500v1

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Seq: CP009876.1 Klebsiella pneumoniae subsp. pneumoniae strain KPNIH31, complete genome (5228295 bp)
Overview 1 RT 1: 2099908-2105325 bp 2 RT 2: 3370061-3376543 bp 3 RT 3: 4503648-4511161 bp Neighborhood of RT #1 [2099908, 2105327] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #2 [3370061, 3376545] YccC PRK10016 RVT-GII dacD SbcB Neighborhood of RT #3 [4503648, 4511175] RVT-Retrons DinI RVT-GII Phage_GPA PHA00080 Feature: gene Location: 2099908-2101047 bp Ori: AIX83971.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 2100091-2100991 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 21 00091 -21 00991 bp Feature: gene Location: 2101218-2101460 bp Ori: AIX83972.1 Feature: domain Description: DinI Location: 2101269-2101449 bp Feature: domain Description: DinI Location: 21 01 269-21 01 449 bp Feature: gene Location: 2102077-2103561 bp Ori: AIX83973.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2102479-2103169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 02479-21 031 69 bp Feature: gene Location: 2103640-2104059 bp Ori: AIX83974.1 Feature: domain Description: PRK10276 Location: 2103643-2104054 bp Feature: domain Description: PRK1 0276 Location: 21 03643-21 04054 bp Feature: gene Location: 2104062-2105327 bp Ori: AIX83975.1 Feature: domain Description: umuC Location: 2104065-2105325 bp Feature: domain Description: umuC Location: 21 04065-21 05325 bp Feature: gene Location: 3370061-3371119 bp Ori: AIX85192.1 Feature: domain Description: YccC Location: 3370067-3371105 bp Feature: domain Description: YccC Location: 3370067-3371 1 05 bp Feature: gene Location: 3371218-3371691 bp Ori: AIX85193.1 Feature: domain Description: PRK10016 Location: 3371221-3371680 bp Feature: domain Description: PRK1 001 6 Location: 3371 221 -3371 680 bp Feature: gene Location: 3371773-3373257 bp Ori: AIX85194.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3372175-3372865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33721 75-3372865 bp Feature: gene Location: 3373777-3374940 bp Ori: AIX87039.1 Feature: domain Description: dacD Location: 3373780-3374935 bp Feature: domain Description: dacD Location: 3373780-3374935 bp Feature: gene Location: 3375121-3376545 bp Ori: AIX85195.1 Gene: sbcB Feature: domain Description: SbcB Location: 3375127-3376543 bp Feature: domain Description: SbcB Location: 33751 27-3376543 bp Feature: gene Location: 4503648-4503842 bp Feature: gene Location: 4503841-4504272 bp Feature: gene Location: 4504411-4505361 bp Ori: AIX86212.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4504591-4505134 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4504591 -45051 34 bp Feature: gene Location: 4505449-4505649 bp Feature: gene Location: 4506268-4506498 bp Ori: AIX87080.1 Feature: domain Description: DinI Location: 4506313-4506496 bp Feature: domain Description: DinI Location: 450631 3-4506496 bp Feature: gene Location: 4506786-4508270 bp Ori: AIX86214.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4507188-4507878 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45071 88-4507878 bp Feature: gene Location: 4508736-4510952 bp Ori: AIX86215.1 Feature: domain Description: Phage_GPA Location: 4509153-4510095 bp Feature: domain Description: Phage_GPA Location: 45091 53-451 0095 bp Feature: gene Location: 4510954-4511175 bp Ori: AIX86216.1 Feature: domain Description: PHA00080 Location: 4510960-4511161 bp Feature: domain Description: PHA00080 Location: 451 0960-451 1 1 61 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925), RVT-Retrons
Phage_GPA (pfam05840), PHA00080 (DksA-like zinc finger domain containing protein)

Seq: CP009879.1 Klebsiella pneumoniae subsp. pneumoniae strain KPNIH31 plasmid pKPN-c22, complete sequence (178563 bp)
Overview 1 RT 1: 134348-139632 bp Neighborhood of RT #1 [134348, 139697] Antirestrict RVT-GII PRK10276 StbD Feature: gene Location: 134348-134773 bp Ori: AIX87311.1 Feature: domain Description: Antirestrict Location: 134483-134771 bp Feature: domain Description: Antirestrict Location: 134483-134771 bp Feature: gene Location: 135293-135523 bp Feature: gene Location: 135757-137265 bp Ori: AIX87312.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 136159-136873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 136159-136873 bp Feature: gene Location: 137670-138095 bp Ori: AIX87313.1 Feature: domain Description: PRK10276 Location: 137673-138081 bp Feature: domain Description: PRK102 76 Location: 137673-138081 bp Feature: gene Location: 139446-139697 bp Ori: AIX87314.1 Feature: domain Description: StbD Location: 139464-139632 bp Feature: domain Description: StbD Location: 139464-139632 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), StbD (COG2161)