myRT

myRT report for GCA_000785535.1_ASM78553v1

Download annotations/find similar RTs

Seq: CP007595.1 Arthrobacter sp. PAMC25486, complete genome (4593579 bp)
Overview 1 RT 1: 482231-487683 bp 2 RT 2: 589815-596041 bp 3 RT 3: 3654418-3658556 bp 4 RT 4: 3694228-3700059 bp Neighborhood of RT #1 [482231, 487712] COG3552 MoxR RVT-Retrons MviM Tas Tas Neighborhood of RT #2 [589815, 596049] GrpB RVT-GII GIIM DDE_Tnp_1_4 Neighborhood of RT #3 [3654418, 3658556] DDE_Tnp_1_4 RVT-GII GIIM Neighborhood of RT #4 [3694228, 3700064] DDE_Tnp_1_4 RVT-GII GIIM siderophore_interacting FepB Feature: gene Location: 482231-483328 bp Ori: AIY00083.1 Feature: domain Description: COG3552 Location: 482258-483317 bp Feature: domain Description: COG3552 Location: 482258-48331 7 bp Feature: gene Location: 483383-484264 bp Ori: AIY00084.1 Feature: domain Description: MoxR Location: 483410-484151 bp Feature: domain Description: MoxR Location: 48341 0-4841 51 bp Feature: gene Location: 484410-485915 bp Ori: AIY00085.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 485067-485685 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 485067-485685 bp Feature: gene Location: 486347-486988 bp Ori: AIY00086.1 Feature: domain Description: MviM Location: 486350-486836 bp Feature: domain Description: MviM Location: 486350-486836 bp Feature: gene Location: 486966-487712 bp Ori: AIY00087.1 Feature: domain Description: Tas Location: 487389-487575 bp Feature: domain Description: Tas Location: 487389-487575 bp Feature: domain Description: Tas Location: 487593-487683 bp Feature: domain Description: Tas Location: 487593-487683 bp Feature: gene Location: 589815-590570 bp Ori: AIY00217.1 Feature: domain Description: GrpB Location: 589914-590394 bp Feature: domain Description: GrpB Location: 58991 4-590394 bp Feature: gene Location: 591429-591863 bp Feature: gene Location: 592384-593847 bp Ori: AIY00219.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 592708-593398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 592708-593398 bp Feature: domain Description: GIIM Note: maturase Location: 593467-593698 bp Feature: domain Description: GIIM Note: maturase Location: 593467-593698 bp Feature: gene Location: 594516-594629 bp Feature: gene Location: 594655-596049 bp Ori: AIY00221.1 Feature: domain Description: DDE_Tnp_1_4 Location: 594673-596041 bp Feature: domain Description: DDE_Tnp_1 _4 Location: 594673-596041 bp Feature: gene Location: 3654418-3654930 bp Ori: AIY03114.1 Feature: domain Description: DDE_Tnp_1_4 Location: 3654451-3654922 bp Feature: domain Description: DDE_Tnp_1 _4 Location: 3654451 -3654922 bp Feature: gene Location: 3654956-3655069 bp Feature: gene Location: 3655738-3657201 bp Ori: AIY03116.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3656062-3656752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3656062-3656752 bp Feature: domain Description: GIIM Note: maturase Location: 3656821-3657052 bp Feature: domain Description: GIIM Note: maturase Location: 3656821 -3657052 bp Feature: gene Location: 3657523-3657744 bp Feature: gene Location: 3658038-3658556 bp Feature: gene Location: 3694228-3695622 bp Ori: AIY03154.1 Feature: domain Description: DDE_Tnp_1_4 Location: 3694246-3695614 bp Feature: domain Description: DDE_Tnp_1 _4 Location: 3694246-369561 4 bp Feature: gene Location: 3695648-3695761 bp Feature: gene Location: 3696430-3697893 bp Ori: AIY03156.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3696754-3697444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3696754-3697444 bp Feature: domain Description: GIIM Note: maturase Location: 3697513-3697744 bp Feature: domain Description: GIIM Note: maturase Location: 369751 3-3697744 bp Feature: gene Location: 3698160-3699029 bp Ori: AIY03157.1 Feature: domain Description: siderophore_interacting Location: 3698223-3698886 bp Feature: domain Description: siderophore_interacting Location: 3698223-3698886 bp Feature: gene Location: 3699066-3700064 bp Ori: AIY03158.1 Feature: domain Description: FepB Location: 3699111-3700059 bp Feature: domain Description: FepB Location: 36991 1 1 -3700059 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3552 (CoxE;Uncharacterized conserved protein, contains von Willebrand factor type A (vWA) domain ), MoxR (COG0714), RVT-Retrons, MviM (COG0673), Tas (COG0667), GrpB (pfam04229), RVT-GII, GIIM (pfam08388), DDE_Tnp_1_4 (pfam13701), siderophore_interacting (cd06193)
FepB (COG4592)