myRT

myRT report for GCA_000788715.2_ASM78871v2

Download annotations/find similar RTs

Seq: CP012997.1 Vibrio cholerae strain 2012Env-9 chromosome 1, complete sequence (1124711 bp)
Overview 1 RT 1: 387728-392610 bp Neighborhood of RT #1 [387728, 393743] PRK06939 tdh RVT-Retrons AAA_15 AAA_15 Feature: gene Location: 387728-388921 bp Ori: AOY45556.1 Gene: kbl Feature: domain Description: PRK06939 Location: 387731-388919 bp Feature: domain Description: PRK06939 Location: 387731 -38891 9 bp Feature: gene Location: 388924-389955 bp Ori: AOY45557.1 Gene: tdh Feature: domain Description: tdh Location: 388933-389953 bp Feature: domain Description: tdh Location: 388933-389953 bp Feature: gene Location: 390350-391450 bp Ori: AOY45558.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 390494-391049 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 390494-391 049 bp Feature: gene Location: 391450-391629 bp Feature: gene Location: 391626-393743 bp Ori: AOY45560.1 Feature: domain Description: AAA_15 Location: 391629-392046 bp Feature: domain Description: AAA_1 5 Location: 391 629-392046 bp Feature: domain Description: AAA_15 Location: 392181-392610 bp Feature: domain Description: AAA_1 5 Location: 3921 81 -39261 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06939 (2-amino-3-ketobutyrate coenzyme A ligase; Provisional), tdh (TIGR00692), RVT-Retrons, AAA_15 (pfam13175)

Seq: CP012998.1 Vibrio cholerae strain 2012Env-9 chromosome 2, complete sequence (2937102 bp)
Overview 1 RT 1: 2022676-2027815 bp Neighborhood of RT #1 [2022676, 2027937] LysR PRK10621 RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 2022676-2023536 bp Ori: AOY48043.1 Feature: domain Description: LysR Location: 2022682-2023510 bp Feature: domain Description: LysR Location: 2 02 2 682 -2 02 3510 bp Feature: gene Location: 2023466-2024251 bp Ori: AOY48044.1 Feature: domain Description: PRK10621 Location: 2023475-2024246 bp Feature: domain Description: PRK1062 1 Location: 2 02 3475-2 02 42 46 bp Feature: gene Location: 2024737-2025684 bp Ori: AOY48045.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2024851-2025448 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 02 4851-2 02 5448 bp Feature: gene Location: 2025685-2027307 bp Ori: AOY48046.1 Feature: domain Description: COG3950 Location: 2025871-2027302 bp Feature: domain Description: COG3950 Location: 2 02 5871-2 02 7302 bp Feature: gene Location: 2027320-2027937 bp Ori: AOY48047.1 Feature: domain Description: TIGR02646 Location: 2027431-2027815 bp Feature: domain Description: TIGR02 646 Location: 2 02 7431-2 02 7815 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysR (COG0583), PRK10621 (hypothetical protein; Provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)