myRT

myRT report for GCA_000807175.1_ASM80717v1

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Seq: CP009267.1 Clostridium pasteurianum DSM 525 = ATCC 6013, complete genome (4351893 bp)
Overview 1 RT 1: 974077-978024 bp 2 RT 2: 2295639-2300799 bp 3 RT 3: 4134303-4145429 bp Neighborhood of RT #1 [974077, 978098] WrbA WrbA RVT-GII GIIM PRK07714 Neighborhood of RT #2 [2295639, 2300834] PerM YrrD RVT-GII GIIM NifU_clost FeS_nifS Neighborhood of RT #3 [4134303, 4145437] BaeS OmpR RVT-GII GIIM RVT-GII HTH_32 rve Mu-transpos_C pepcterm_ATPase RVT-GII RVT-GII MFS_MdfA_MDR_like trans_reg_C Feature: gene Location: 974077-974658 bp Ori: AJA46990.1 Feature: domain Description: WrbA Location: 974080-974488 bp Feature: domain Description: WrbA Location: 974080-974488 bp Feature: gene Location: 974651-975322 bp Ori: AJA46991.1 Feature: domain Description: WrbA Location: 974789-974957 bp Feature: domain Description: WrbA Location: 974789-974957 bp Feature: gene Location: 976015-976707 bp Ori: AJA46992.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 976039-976342 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 976039-976342 bp Feature: domain Description: GIIM Note: maturase Location: 976426-976618 bp Feature: domain Description: GIIM Note: maturase Location: 976426-97661 8 bp Feature: gene Location: 976890-977078 bp Feature: gene Location: 977613-978098 bp Ori: AJA46994.1 Feature: domain Description: PRK07714 Location: 977880-978024 bp Feature: domain Description: PRK0771 4 Location: 977880-978024 bp Feature: gene Location: 2295639-2296652 bp Ori: AJA48220.1 Feature: domain Description: PerM Location: 2295654-2296638 bp Feature: domain Description: PerM Location: 2295654-2296638 bp Feature: gene Location: 2296636-2297163 bp Ori: AJA48221.1 Feature: domain Description: YrrD Location: 2296657-2297158 bp Feature: domain Description: YrrD Location: 2296657-22971 58 bp Feature: gene Location: 2297268-2298554 bp Ori: AJA48222.1 Gene: ltrA1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2297517-2298201 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 229751 7-2298201 bp Feature: domain Description: GIIM Note: maturase Location: 2298273-2298498 bp Feature: domain Description: GIIM Note: maturase Location: 2298273-2298498 bp Feature: gene Location: 2299207-2299638 bp Ori: AJA48223.1 Gene: iscU2 Feature: domain Description: NifU_clost Location: 2299216-2299570 bp Feature: domain Description: NifU_clost Location: 229921 6-2299570 bp Feature: gene Location: 2299641-2300834 bp Ori: AJA48224.1 Gene: iscS3 Feature: domain Description: FeS_nifS Location: 2299659-2300799 bp Feature: domain Description: FeS_nifS Location: 2299659-2300799 bp Feature: gene Location: 4134303-4135562 bp Ori: AJA49916.1 Gene: phoR6 Feature: domain Description: BaeS Location: 4134618-4135548 bp Feature: domain Description: BaeS Location: 41 3461 8-41 35548 bp Feature: gene Location: 4135559-4136269 bp Ori: AJA49917.1 Feature: domain Description: OmpR Location: 4135586-4136246 bp Feature: domain Description: OmpR Location: 41 35586-41 36246 bp Feature: gene Location: 4136374-4137300 bp Ori: AJA49918.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4136500-4136947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 36500-41 36947 bp Feature: domain Description: GIIM Note: maturase Location: 4137019-4137244 bp Feature: domain Description: GIIM Note: maturase Location: 41 3701 9-41 37244 bp Feature: gene Location: 4137287-4137841 bp Ori: AJA49919.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4137323-4137494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 37323-41 37494 bp Feature: gene Location: 4137973-4138545 bp Feature: gene Location: 4138745-4140007 bp Ori: AJA49921.1 Feature: domain Description: HTH_32 Location: 4138916-4139144 bp Feature: domain Description: HTH_32 Location: 41 3891 6-41 391 44 bp Feature: domain Description: rve Location: 4139219-4139564 bp Feature: domain Description: rve Location: 41 3921 9-41 39564 bp Feature: domain Description: Mu-transpos_C Location: 4139744-4139906 bp Feature: domain Description: Mu-transpos_C Location: 41 39744-41 39906 bp Feature: gene Location: 4140023-4140829 bp Ori: AJA49922.1 Gene: exeA10 Feature: domain Description: pepcterm_ATPase Location: 4140026-4140812 bp Feature: domain Description: pepcterm_ATPase Location: 41 40026-41 4081 2 bp Feature: gene Location: 4141031-4141834 bp Ori: AJA49923.1 Gene: ltrA2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4141286-4141805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 41 286-41 41 805 bp Feature: gene Location: 4142318-4142815 bp Ori: AJA49924.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4142567-4142804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 42567-41 42804 bp Feature: gene Location: 4143474-4144694 bp Ori: AJA49925.1 Gene: bcr Feature: domain Description: MFS_MdfA_MDR_like Location: 4143549-4144662 bp Feature: domain Description: MFS_MdfA_MDR_like Location: 41 43549-41 44662 bp Feature: gene Location: 4145003-4145437 bp Ori: AJA49926.1 Feature: domain Description: trans_reg_C Location: 4145231-4145429 bp Feature: domain Description: trans_reg_C Location: 41 45231 -41 45429 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WrbA (COG0655), RVT-GII, GIIM (pfam08388), PRK07714 (YlxQ family RNA-binding protein), PerM (COG0628), YrrD (COG3881), NifU_clost (TIGR03419), FeS_nifS (TIGR03402), BaeS (COG0642), OmpR (COG0745)
HTH_32 (pfam13565), rve (pfam00665), Mu-transpos_C (pfam09299), pepcterm_ATPase (TIGR03015), MFS_MdfA_MDR_like (cd17320), trans_reg_C (cd00383)