myRT

myRT report for GCA_000814305.1_ASM81430v1

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Seq: CP010392.1 Klebsiella pneumoniae strain 34618, complete genome (5313576 bp)
Overview 1 RT 1: 1766572-1773043 bp 2 RT 2: 3003720-3011441 bp 3 RT 3: 3191905-3197269 bp 4 RT 4: 3941363-3944815 bp Neighborhood of RT #1 [1766572, 1773057] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #2 [3003720, 3011497] umuC PRK10276 RVT-GII RVT-GII XerC Rve Neighborhood of RT #3 [3191905, 3197325] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Neighborhood of RT #4 [3941363, 3944871] PRK10276 PRK10276 RVT-GII Laminin_G_3 Feature: gene Location: 1766572-1767996 bp Ori: AJB75327.1 Gene: sbcB Feature: domain Description: SbcB Location: 1766578-1767994 bp Feature: domain Description: SbcB Location: 1 766578-1 767994 bp Feature: gene Location: 1768177-1769340 bp Ori: AJB75328.1 Feature: domain Description: dacD Location: 1768180-1769335 bp Feature: domain Description: dacD Location: 1 7681 80-1 769335 bp Feature: gene Location: 1769861-1771345 bp Ori: AJB75329.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1770263-1770953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 770263-1 770953 bp Feature: gene Location: 1771427-1771900 bp Ori: AJB75330.1 Feature: domain Description: PRK10016 Location: 1771430-1771889 bp Feature: domain Description: PRK1 001 6 Location: 1 771 430-1 771 889 bp Feature: gene Location: 1771999-1773057 bp Ori: AJB75331.1 Feature: domain Description: YccC Location: 1772005-1773043 bp Feature: domain Description: YccC Location: 1 772005-1 773043 bp Feature: gene Location: 3003720-3004985 bp Ori: AJB76518.1 Feature: domain Description: umuC Location: 3003723-3004983 bp Feature: domain Description: umuC Location: 3003723-3004983 bp Feature: gene Location: 3004987-3005406 bp Ori: AJB78790.1 Feature: domain Description: PRK10276 Location: 3004990-3005401 bp Feature: domain Description: PRK1 0276 Location: 3004990-3005401 bp Feature: gene Location: 3005486-3006970 bp Ori: AJB76519.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3005888-3006578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3005888-3006578 bp Feature: gene Location: 3007396-3008880 bp Ori: AJB76520.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3007798-3008488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3007798-3008488 bp Feature: gene Location: 3009778-3010200 bp Ori: AJB76521.1 Feature: domain Description: XerC Location: 3009814-3010159 bp Feature: domain Description: XerC Location: 300981 4-301 01 59 bp Feature: gene Location: 3010793-3011497 bp Ori: AJB76522.1 Feature: domain Description: Rve Location: 3010796-3011441 bp Feature: domain Description: Rve Location: 301 0796-301 1 441 bp Feature: gene Location: 3191905-3193170 bp Ori: AJB76708.1 Feature: domain Description: umuC Location: 3191908-3193168 bp Feature: domain Description: umuC Location: 31 91 908-31 931 68 bp Feature: gene Location: 3193173-3193592 bp Ori: AJB76709.1 Feature: domain Description: PRK10276 Location: 3193176-3193587 bp Feature: domain Description: PRK1 0276 Location: 31 931 76-31 93587 bp Feature: gene Location: 3193671-3195155 bp Ori: AJB76710.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3194073-3194763 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 94073-31 94763 bp Feature: gene Location: 3195773-3196015 bp Ori: AJB76711.1 Feature: domain Description: DinI Location: 3195824-3196004 bp Feature: domain Description: DinI Location: 31 95824-31 96004 bp Feature: gene Location: 3196186-3197325 bp Ori: AJB76712.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3196369-3197269 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 31 96369-31 97269 bp Feature: gene Location: 3941363-3941680 bp Ori: AJB77391.1 Feature: domain Description: PRK10276 Location: 3941369-3941483 bp Feature: domain Description: PRK1 0276 Location: 3941 369-3941 483 bp Feature: domain Description: PRK10276 Location: 3941510-3941579 bp Feature: domain Description: PRK1 0276 Location: 3941 51 0-3941 579 bp Feature: gene Location: 3941680-3941919 bp Feature: gene Location: 3941997-3943481 bp Ori: AJB77393.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3942399-3943089 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3942399-3943089 bp Feature: gene Location: 3943934-3944143 bp Feature: gene Location: 3944140-3944871 bp Ori: AJB77395.1 Feature: domain Description: Laminin_G_3 Location: 3944461-3944815 bp Feature: domain Description: Laminin_G_3 Location: 3944461 -394481 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SbcB (COG2925), dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), XerC (COG4973), Rve (COG3316), DinI (pfam06183)
GT9_LPS_heptosyltransferase (cd03789), Laminin_G_3 (pfam13385)

Seq: CP010396.1 Klebsiella pneumoniae strain 34618 plasmid p34618-71.572kb, complete sequence (71572 bp)
Overview 1 RT 1: 15913-23038 bp Neighborhood of RT #1 [15913, 23046] DDE_Tnp_1_5 DDE_Tnp_IS1 RVT-GII PRK10276 umuC Feature: gene Location: 15913-16836 bp Ori: AJB79163.1 Feature: domain Description: DDE_Tnp_1_5 Location: 15970-16303 bp Feature: domain Description: DDE_Tnp_1_5 Location: 15970-16303 bp Feature: gene Location: 18602-19105 bp Ori: AJB79164.1 Feature: domain Description: DDE_Tnp_IS1 Location: 18713-19103 bp Feature: domain Description: DDE_Tnp_IS1 Location: 18713-19103 bp Feature: gene Location: 19451-20935 bp Ori: AJB79165.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19853-20543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19853-2 0543 bp Feature: gene Location: 21344-21775 bp Ori: AJB79166.1 Feature: domain Description: PRK10276 Location: 21395-21758 bp Feature: domain Description: PRK102 76 Location: 2 1395-2 1758 bp Feature: gene Location: 21775-23046 bp Ori: AJB79167.1 Feature: domain Description: umuC Location: 21778-23038 bp Feature: domain Description: umuC Location: 2 1778-2 3038 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_5 (pfam13737), DDE_Tnp_IS1 (pfam03400), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: CP010393.1 Klebsiella pneumoniae strain 34618 plasmid p34618-207.543kb, complete sequence (207543 bp)
Overview 1 RT 1: 102101-107095 bp Neighborhood of RT #1 [102101, 107097] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 102101-103372 bp Ori: AJB78973.1 Feature: domain Description: umuC Location: 102104-103367 bp Feature: domain Description: umuC Location: 102104-103 3 67 bp Feature: gene Location: 103372-103797 bp Ori: AJB78974.1 Feature: domain Description: PRK10276 Location: 103375-103783 bp Feature: domain Description: PRK10276 Location: 103 3 75-103 783 bp Feature: gene Location: 104203-105687 bp Ori: AJB78975.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104605-105295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104605-105295 bp Feature: gene Location: 105921-106151 bp Feature: gene Location: 106672-107097 bp Ori: AJB78977.1 Feature: domain Description: Antirestrict Location: 106807-107095 bp Feature: domain Description: Antirestrict Location: 106807-107095 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)