myRT

myRT report for GCA_000817975.1_ASM81797v1

Download annotations/find similar RTs

Seq: CP010415.1 Azotobacter chroococcum NCIMB 8003, complete genome (4591803 bp)
Overview 1 RT 1: 548997-558656 bp 2 RT 2: 3269816-3274290 bp 3 RT 3: 3279743-3286728 bp Neighborhood of RT #1 [548997, 558667] Alginate_lyase Hepar_II_III HTH_1 PBP2_LTTR_like_1 RVT-UG8 RVT-UG3 COG3666 DDE_Tnp_1 GLOD5 Neighborhood of RT #2 [3269816, 3274376] SdhE RVT-GII GIIM HNHc HTH_Tnp_ISL3 DDE_Tnp_ISL3 YgfZ Neighborhood of RT #3 [3279743, 3286733] PRK10839 COG3666 DDE_Tnp_1 RVT_N RVT-GII GIIM HNH groEL groES Feature: gene Location: 548997-551231 bp Ori: AJE20009.1 Feature: domain Description: Alginate_lyase Location: 549204-549888 bp Feature: domain Description: Alginate_lyase Location: 549204-549888 bp Feature: domain Description: Hepar_II_III Location: 550122-550959 bp Feature: domain Description: Hepar_II_III Location: 5501 22-550959 bp Feature: gene Location: 551582-552490 bp Ori: AJE20010.1 Feature: domain Description: HTH_1 Location: 551609-551786 bp Feature: domain Description: HTH_1 Location: 551 609-551 786 bp Feature: domain Description: PBP2_LTTR_like_1 Location: 551876-552467 bp Feature: domain Description: PBP2_LTTR_like_1 Location: 551 876-552467 bp Feature: gene Location: 553201-555159 bp Ori: AJE20011.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 553726-554173 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 553726-5541 73 bp Feature: gene Location: 555152-556414 bp Ori: AJE20012.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 555440-555941 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 555440-555941 bp Feature: gene Location: 556702-557808 bp Ori: AJE20013.1 Feature: domain Description: COG3666 Location: 556768-557212 bp Feature: domain Description: COG3666 Location: 556768-55721 2 bp Feature: domain Description: DDE_Tnp_1 Location: 557326-557761 bp Feature: domain Description: DDE_Tnp_1 Location: 557326-557761 bp Feature: gene Location: 558269-558667 bp Ori: AJE20014.1 Feature: domain Description: GLOD5 Location: 558293-558656 bp Feature: domain Description: GLOD5 Location: 558293-558656 bp Feature: gene Location: 3269816-3270268 bp Feature: gene Location: 3270252-3270506 bp Ori: AJE22320.1 Feature: domain Description: SdhE Location: 3270258-3270498 bp Feature: domain Description: SdhE Location: 3270258-3270498 bp Feature: gene Location: 3270660-3271883 bp Ori: AJE22321.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3270672-3271152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3270672-3271 1 52 bp Feature: domain Description: GIIM Note: maturase Location: 3271227-3271458 bp Feature: domain Description: GIIM Note: maturase Location: 3271 227-3271 458 bp Feature: domain Description: HNHc Note: nucleases Location: 3271689-3271842 bp Feature: domain Description: HNHc Note: nucleases Location: 3271 689-3271 842 bp Feature: gene Location: 3272253-3273227 bp Ori: AJE22322.1 Feature: domain Description: HTH_Tnp_ISL3 Location: 3272286-3272433 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 3272286-3272433 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 3272481-3273198 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 3272481 -32731 98 bp Feature: gene Location: 3273435-3274376 bp Ori: AJE22323.1 Feature: domain Description: YgfZ Location: 3273447-3274290 bp Feature: domain Description: YgfZ Location: 3273447-3274290 bp Feature: gene Location: 3279743-3280453 bp Ori: AJE22329.1 Gene: rsuA Feature: domain Description: PRK10839 Location: 3279764-3280445 bp Feature: domain Description: PRK1 0839 Location: 3279764-3280445 bp Feature: gene Location: 3280703-3281809 bp Ori: AJE22330.1 Feature: domain Description: COG3666 Location: 3280769-3281213 bp Feature: domain Description: COG3666 Location: 3280769-3281 21 3 bp Feature: domain Description: DDE_Tnp_1 Location: 3281327-3281762 bp Feature: domain Description: DDE_Tnp_1 Location: 3281 327-3281 762 bp Feature: gene Location: 3282028-3283719 bp Ori: AJE22331.1 Feature: domain Description: RVT_N Location: 3282082-3282322 bp Feature: domain Description: RVT_N Location: 3282082-3282322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3282370-3283015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3282370-328301 5 bp Feature: domain Description: GIIM Note: maturase Location: 3283066-3283300 bp Feature: domain Description: GIIM Note: maturase Location: 3283066-3283300 bp Feature: domain Description: HNH Note: nucleases Location: 3283540-3283675 bp Feature: domain Description: HNH Note: nucleases Location: 3283540-3283675 bp Feature: gene Location: 3284753-3286393 bp Ori: AJE22332.1 Gene: groEL Feature: domain Description: groEL Location: 3284759-3286379 bp Feature: domain Description: groEL Location: 3284759-3286379 bp Feature: gene Location: 3286440-3286733 bp Ori: AJE22333.1 Gene: groES Feature: domain Description: groES Location: 3286443-3286728 bp Feature: domain Description: groES Location: 3286443-3286728 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Alginate_lyase (pfam05426), Hepar_II_III (pfam07940), HTH_1 (pfam00126), PBP2_LTTR_like_1 (cd08421), RVT-UG8, RVT-UG3, COG3666 (Transposase ), DDE_Tnp_1 (pfam01609), GLOD5 (cd07253), SdhE (COG2938)
RVT-GII, GIIM (pfam08388), HNHc (smart00507), HTH_Tnp_ISL3 (pfam13542), DDE_Tnp_ISL3 (pfam01610), YgfZ (COG0354), PRK10839 (16S rRNA pseudouridine(516) synthase RsuA), RVT_N (pfam13655), HNH (pfam01844), groEL (PRK12852)
groES (PRK14533)