myRT

myRT report for GCA_000828875.1_ASM82887v1

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Seq: AP014581.1 Burkholderia sp. RPE67 plasmid p3 DNA, complete genome (194177 bp)
Overview 1 RT 1: 98238-103482 bp Neighborhood of RT #1 [98238, 104144] NADAR RVT_N RVT-GII RVT-GII GIIM HNHc DUF1768 MPP_Mre11_N Feature: gene Location: 98238-99566 bp Feature: gene Location: 99749-99889 bp Ori: BAO93074.1 Feature: domain Description: NADAR Location: 99776-99878 bp Feature: domain Description: NADAR Location: 99776-99878 bp Feature: gene Location: 100206-101273 bp Ori: BAO93075.1 Feature: domain Description: RVT_N Location: 100524-100758 bp Feature: domain Description: RVT_N Location: 1 00524-1 00758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100812-101247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0081 2-1 01 247 bp Feature: gene Location: 101351-102166 bp Ori: BAO93076.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101360-101459 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 360-1 01 459 bp Feature: domain Description: GIIM Note: maturase Location: 101510-101744 bp Feature: domain Description: GIIM Note: maturase Location: 1 01 51 0-1 01 744 bp Feature: domain Description: HNHc Note: nucleases Location: 101975-102131 bp Feature: domain Description: HNHc Note: nucleases Location: 1 01 975-1 021 31 bp Feature: gene Location: 102306-102623 bp Ori: BAO93077.1 Feature: domain Description: DUF1768 Location: 102318-102615 bp Feature: domain Description: DUF1 768 Location: 1 0231 8-1 0261 5 bp Feature: gene Location: 102717-104144 bp Ori: BAO93078.1 Feature: domain Description: MPP_Mre11_N Location: 102765-103482 bp Feature: domain Description: MPP_Mre1 1 _N Location: 1 02765-1 03482 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NADAR (cl21532), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1768 (pfam08719), MPP_Mre11_N (cd00840)

Seq: AP014576.1 Burkholderia sp. RPE67 DNA, complete genome, chromosome: 1 (3090091 bp)
Overview 1 RT 1: 1978838-1984278 bp Neighborhood of RT #1 [1978838, 1984310] PssA PRK05305 RVT_N RVT-GII GIIM HNH PRK05479 Feature: gene Location: 1978838-1979704 bp Ori: BAO86884.1 Feature: domain Description: PssA Location: 1978970-1979648 bp Feature: domain Description: PssA Location: 1978970-1979648 bp Feature: gene Location: 1979718-1980362 bp Ori: BAO86885.1 Gene: psd Feature: domain Description: PRK05305 Location: 1979742-1980354 bp Feature: domain Description: PRK05305 Location: 1979742 -1980354 bp Feature: gene Location: 1980480-1982180 bp Ori: BAO86886.1 Feature: domain Description: RVT_N Location: 1980537-1980780 bp Feature: domain Description: RVT_N Location: 1980537-1980780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1980825-1981473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 198082 5-1981473 bp Feature: domain Description: GIIM Note: maturase Location: 1981527-1981758 bp Feature: domain Description: GIIM Note: maturase Location: 198152 7-1981758 bp Feature: domain Description: HNH Note: nucleases Location: 1982010-1982142 bp Feature: domain Description: HNH Note: nucleases Location: 1982 010-1982 142 bp Feature: gene Location: 1982297-1982854 bp Feature: gene Location: 1983294-1984310 bp Ori: BAO86888.1 Gene: ilvC Feature: domain Description: PRK05479 Location: 1983297-1984278 bp Feature: domain Description: PRK05479 Location: 19832 97-19842 78 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PssA (COG1183), PRK05305 (phosphatidylserine decarboxylase family protein), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PRK05479 (ketol-acid reductoisomerase; Provisional)