myRT

myRT report for GCA_000829015.1_ASM82901v1

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Seq: AP014696.1 Clostridium botulinum DNA, complete genome, strain: 111 (3901300 bp)
Overview 1 RT 1: 2235180-2241724 bp 2 RT 2: 2347380-2353070 bp 3 RT 3: 2976991-2980197 bp Neighborhood of RT #1 [2235180, 2241807] RVT-UG24 HNH_4 Neighborhood of RT #2 [2347380, 2353099] RVT-GII HNHc Staygreen Aes Neighborhood of RT #3 [2976991, 2980197] Uup Uup PBP2_LTTR_substrate RVT-GII Feature: gene Location: 2235180-2235368 bp Feature: gene Location: 2235384-2235689 bp Feature: gene Location: 2236430-2239687 bp Ori: BAQ13887.1 Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 2236931-2237396 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 2236931 -2237396 bp Feature: gene Location: 2239680-2240282 bp Feature: gene Location: 2240803-2241807 bp Ori: BAQ13889.1 Feature: domain Description: HNH_4 Location: 2241571-2241724 bp Feature: domain Description: HNH_4 Location: 2241 571 -2241 724 bp Feature: gene Location: 2347380-2347613 bp Feature: gene Location: 2347720-2347878 bp Feature: gene Location: 2347908-2349728 bp Ori: BAQ13967.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2348229-2348928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2348229-2348928 bp Feature: domain Description: HNHc Note: nucleases Location: 2349453-2349618 bp Feature: domain Description: HNHc Note: nucleases Location: 2349453-234961 8 bp Feature: gene Location: 2351390-2351836 bp Ori: BAQ13968.1 Feature: domain Description: Staygreen Location: 2351399-2351828 bp Feature: domain Description: Staygreen Location: 2351 399-2351 828 bp Feature: gene Location: 2352068-2353099 bp Ori: BAQ13969.1 Feature: domain Description: Aes Location: 2352230-2353070 bp Feature: domain Description: Aes Location: 2352230-2353070 bp Feature: gene Location: 2976991-2978469 bp Ori: BAQ14477.1 Feature: domain Description: Uup Location: 2976994-2977231 bp Feature: domain Description: Uup Location: 2976994-2977231 bp Feature: domain Description: Uup Location: 2977267-2978464 bp Feature: domain Description: Uup Location: 2977267-2978464 bp Feature: gene Location: 2978990-2979187 bp Ori: BAQ36460.1 Feature: domain Description: PBP2_LTTR_substrate Location: 2978996-2979167 bp Feature: domain Description: PBP2_LTTR_substrate Location: 2978996-29791 67 bp Feature: gene Location: 2979325-2979543 bp Ori: BAQ36461.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2979331-2979457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2979331 -2979457 bp Feature: gene Location: 2979717-2979836 bp Feature: gene Location: 2980045-2980197 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG24, HNH_4 (pfam13395), RVT-GII, HNHc (smart00507), Staygreen (pfam12638), Aes (COG0657), Uup (COG0488), PBP2_LTTR_substrate (cd05466)