myRT

myRT report for GCA_000831105.1_ASM83110v1

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Seq: CP007572.1 Streptococcus agalactiae strain GBS6, complete genome (2231475 bp)
Overview 1 RT 1: 104845-109363 bp 2 RT 2: 157961-164202 bp 3 RT 3: 208912-217443 bp 4 RT 4: 428266-433636 bp 5 RT 5: 573164-580531 bp 6 RT 6: 645661-651923 bp 7 RT 7: 765054-772225 bp 8 RT 8: 798173-804952 bp 9 RT 9: 825274-830902 bp 10 RT 10: 975957-982889 bp 11 RT 11: 1043304-1049085 bp 12 RT 12: 1207118-1214492 bp 13 RT 13: 1609405-1616575 bp 14 RT 14: 1627657-1634075 bp 15 RT 15: 1767666-1771875 bp 16 RT 16: 1783365-1790903 bp 17 RT 17: 2044283-2048881 bp 18 RT 18: 2148110-2154666 bp 19 RT 19: 2203637-2209281 bp Neighborhood of RT #1 [104845, 109386] NTP_transf_6 DUF2992 RVT-GII GIIM PRK08295 PhoE Neighborhood of RT #2 [157961, 164228] PRK02315 Rfe RVT-GII GIIM COG3666 DDE_Tnp_1_6 SufC Neighborhood of RT #3 [208912, 217607] PRK00566 DUF1033 RVT-GII GIIM COG3666 DDE_Tnp_1_6 PulE Neighborhood of RT #4 [428266, 433641] YccU Fur RVT-GII GIIM YSIRK_signal SSURE SSURE OmpR Neighborhood of RT #5 [573164, 580545] TTHA1623-like_MBL-fold PRK08643 RVT-GII GIIM PRK07246 PRK05764 Neighborhood of RT #6 [645661, 651967] PHA02517 yjbJ RVT-GII GIIM COG3666 DDE_Tnp_1_6 FtsW Neighborhood of RT #7 [765054, 772233] Gph Glyco_hydro_3 RVT-GII GIIM COG3666 DDE_Tnp_1_6 PepP Neighborhood of RT #8 [798173, 804954] PRK10416 COG3666 DDE_Tnp_1_6 RVT-GII GIIM YcgQ YraQ Neighborhood of RT #9 [825274, 830961] YbaK_deacylase NDUFA9_like_SDR_a RVT-GII GIIM COG3666 DDE_Tnp_1_6 GH25_PlyB-like Neighborhood of RT #10 [975957, 982894] PRK11856 lipoamide_DH lipoyltrans RVT-GII GIIM COG3442 MurE Neighborhood of RT #11 [1043304, 1049090] SrtA VOC_Bs_YwkD_like RVT-GII GIIM COG3666 DDE_Tnp_1_6 KefB Neighborhood of RT #12 [1207118, 1214509] CE4_NodB_like_5s_6s COG3666 DDE_Tnp_1_6 RVT-GII GIIM BetT ALDH_SSADH1_GabD1 Neighborhood of RT #13 [1609405, 1616580] DUF4956 PolyPPase_VTC_like RVT-GII GIIM Branch_AA_trans PRK12267 Neighborhood of RT #14 [1627657, 1634080] PRK05355 CutC RVT-GII GIIM COG3666 DDE_Tnp_1_6 RsmI Neighborhood of RT #15 [1767666, 1771877] EcCorA_ZntB-like_u2 rpsR RVT-GII GIIM PRK07275 rpsF Neighborhood of RT #16 [1783365, 1790929] Ninjurin COG3666 DDE_Tnp_1_6 RVT-GII GIIM PRK02406 pyr_form_ly_1 Neighborhood of RT #17 [2044283, 2048901] PLDc_N HipB RVT-GII GIIM PAP2_like_2 Neighborhood of RT #18 [2148110, 2154668] OmpR BaeS RVT-GII GIIM YfcC PRK12353 Neighborhood of RT #19 [2203637, 2209763] recf COG3666 DDE_Tnp_1_6 RVT-GII GIIM Sugar_transport HTH_XRE Feature: gene Location: 104845-105396 bp Ori: AIK74823.1 Feature: domain Description: NTP_transf_6 Location: 104905-105385 bp Feature: domain Description: NTP_transf_6 Location: 1 04905-1 05385 bp Feature: gene Location: 105616-106035 bp Ori: AIK74824.1 Feature: domain Description: DUF2992 Location: 105625-106033 bp Feature: domain Description: DUF2992 Location: 1 05625-1 06033 bp Feature: gene Location: 106599-107876 bp Ori: AIK74825.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106803-107418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 06803-1 0741 8 bp Feature: domain Description: GIIM Note: maturase Location: 107472-107688 bp Feature: domain Description: GIIM Note: maturase Location: 1 07472-1 07688 bp Feature: gene Location: 108092-108571 bp Ori: AIK74826.1 Feature: domain Description: PRK08295 Location: 108107-108332 bp Feature: domain Description: PRK08295 Location: 1 081 07-1 08332 bp Feature: gene Location: 108694-109386 bp Ori: AIK74827.1 Feature: domain Description: PhoE Location: 108703-109363 bp Feature: domain Description: PhoE Location: 1 08703-1 09363 bp Feature: gene Location: 157961-158716 bp Ori: AIK74873.1 Feature: domain Description: PRK02315 Location: 157964-158708 bp Feature: domain Description: PRK0231 5 Location: 1 57964-1 58708 bp Feature: gene Location: 158718-159878 bp Ori: AIK74874.1 Feature: domain Description: Rfe Location: 158739-159699 bp Feature: domain Description: Rfe Location: 1 58739-1 59699 bp Feature: gene Location: 160454-161731 bp Ori: AIK74875.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 160658-161273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 60658-1 61 273 bp Feature: domain Description: GIIM Note: maturase Location: 161327-161543 bp Feature: domain Description: GIIM Note: maturase Location: 1 61 327-1 61 543 bp Feature: gene Location: 161781-163193 bp Ori: AIK74876.1 Feature: domain Description: COG3666 Location: 161796-162267 bp Feature: domain Description: COG3666 Location: 1 61 796-1 62267 bp Feature: domain Description: DDE_Tnp_1_6 Location: 162744-163101 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 1 62744-1 631 01 bp Feature: gene Location: 163458-164228 bp Ori: AIK74877.1 Feature: domain Description: SufC Location: 163461-164202 bp Feature: domain Description: SufC Location: 1 63461 -1 64202 bp Feature: gene Location: 208912-212562 bp Ori: AIK74917.1 Feature: domain Description: PRK00566 Location: 208927-212491 bp Feature: domain Description: PRK00566 Location: 208927-21 2491 bp Feature: gene Location: 212676-213041 bp Ori: AIK74918.1 Feature: domain Description: DUF1033 Location: 212679-213015 bp Feature: domain Description: DUF1 033 Location: 21 2679-21 301 5 bp Feature: gene Location: 213732-215009 bp Ori: AIK74919.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 213936-214551 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 3936-21 4551 bp Feature: domain Description: GIIM Note: maturase Location: 214605-214821 bp Feature: domain Description: GIIM Note: maturase Location: 21 4605-21 4821 bp Feature: gene Location: 215059-216471 bp Ori: AIK74920.1 Feature: domain Description: COG3666 Location: 215074-215545 bp Feature: domain Description: COG3666 Location: 21 5074-21 5545 bp Feature: domain Description: DDE_Tnp_1_6 Location: 216022-216379 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 21 6022-21 6379 bp Feature: gene Location: 216636-217607 bp Ori: AIK74921.1 Feature: domain Description: PulE Location: 216639-217443 bp Feature: domain Description: PulE Location: 21 6639-21 7443 bp Feature: gene Location: 428266-428706 bp Ori: AIK75125.1 Feature: domain Description: YccU Location: 428287-428692 bp Feature: domain Description: YccU Location: 428287-428692 bp Feature: gene Location: 428788-429261 bp Ori: AIK75126.1 Feature: domain Description: Fur Location: 428833-429244 bp Feature: domain Description: Fur Location: 428833-429244 bp Feature: gene Location: 429318-430595 bp Ori: AIK75127.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 429522-430137 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 429522-4301 37 bp Feature: domain Description: GIIM Note: maturase Location: 430191-430407 bp Feature: domain Description: GIIM Note: maturase Location: 4301 91 -430407 bp Feature: gene Location: 431277-432842 bp Ori: AIK75128.1 Feature: domain Description: YSIRK_signal Location: 431292-431382 bp Feature: domain Description: YSIRK_signal Location: 431 292-431 382 bp Feature: domain Description: SSURE Location: 431835-432072 bp Feature: domain Description: SSURE Location: 431 835-432072 bp Feature: domain Description: SSURE Location: 432285-432525 bp Feature: domain Description: SSURE Location: 432285-432525 bp Feature: gene Location: 432955-433641 bp Ori: AIK75129.1 Feature: domain Description: OmpR Location: 432967-433636 bp Feature: domain Description: OmpR Location: 432967-433636 bp Feature: gene Location: 573164-573862 bp Ori: AIK75253.1 Feature: domain Description: TTHA1623-like_MBL-fold Location: 573263-573854 bp Feature: domain Description: TTHA1 623-like_MBL-fold Location: 573263-573854 bp Feature: gene Location: 574030-574794 bp Ori: AIK75254.1 Feature: domain Description: PRK08643 Location: 574033-574792 bp Feature: domain Description: PRK08643 Location: 574033-574792 bp Feature: gene Location: 575357-576634 bp Ori: AIK75255.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 575561-576176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 575561 -5761 76 bp Feature: domain Description: GIIM Note: maturase Location: 576230-576446 bp Feature: domain Description: GIIM Note: maturase Location: 576230-576446 bp Feature: gene Location: 576759-579266 bp Ori: AIK75256.1 Feature: domain Description: PRK07246 Location: 576804-579264 bp Feature: domain Description: PRK07246 Location: 576804-579264 bp Feature: gene Location: 579352-580545 bp Ori: AIK75257.1 Feature: domain Description: PRK05764 Location: 579358-580531 bp Feature: domain Description: PRK05764 Location: 579358-580531 bp Feature: gene Location: 645661-646272 bp Ori: AIK75341.1 Feature: domain Description: PHA02517 Location: 645664-646267 bp Feature: domain Description: PHA0251 7 Location: 645664-646267 bp Feature: gene Location: 646486-646686 bp Ori: AIK75342.1 Feature: domain Description: yjbJ Location: 646489-646678 bp Feature: domain Description: yjbJ Location: 646489-646678 bp Feature: gene Location: 647702-648979 bp Ori: AIK75343.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 647906-648521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 647906-648521 bp Feature: domain Description: GIIM Note: maturase Location: 648575-648791 bp Feature: domain Description: GIIM Note: maturase Location: 648575-648791 bp Feature: gene Location: 649029-650441 bp Ori: AIK75344.1 Feature: domain Description: COG3666 Location: 649044-649515 bp Feature: domain Description: COG3666 Location: 649044-64951 5 bp Feature: domain Description: DDE_Tnp_1_6 Location: 649992-650349 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 649992-650349 bp Feature: gene Location: 650762-651967 bp Ori: AIK75345.1 Feature: domain Description: FtsW Location: 650774-651923 bp Feature: domain Description: FtsW Location: 650774-651 923 bp Feature: gene Location: 765054-765866 bp Ori: AIK75445.1 Feature: domain Description: Gph Location: 765396-765750 bp Feature: domain Description: Gph Location: 765396-765750 bp Feature: gene Location: 765882-767672 bp Ori: AIK75446.1 Feature: domain Description: Glyco_hydro_3 Location: 765972-766929 bp Feature: domain Description: Glyco_hydro_3 Location: 765972-766929 bp Feature: gene Location: 768287-769564 bp Ori: AIK75447.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 768491-769106 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 768491 -7691 06 bp Feature: domain Description: GIIM Note: maturase Location: 769160-769376 bp Feature: domain Description: GIIM Note: maturase Location: 7691 60-769376 bp Feature: gene Location: 769614-771026 bp Ori: AIK75448.1 Feature: domain Description: COG3666 Location: 769629-770100 bp Feature: domain Description: COG3666 Location: 769629-7701 00 bp Feature: domain Description: DDE_Tnp_1_6 Location: 770577-770934 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 770577-770934 bp Feature: gene Location: 771148-772233 bp Ori: AIK75449.1 Feature: domain Description: PepP Location: 771157-772225 bp Feature: domain Description: PepP Location: 771 1 57-772225 bp Feature: gene Location: 798173-799783 bp Ori: AIK75472.1 Feature: domain Description: PRK10416 Location: 798512-799772 bp Feature: domain Description: PRK1 041 6 Location: 79851 2-799772 bp Feature: gene Location: 799912-801408 bp Ori: AIK75473.1 Feature: domain Description: COG3666 Location: 799927-800398 bp Feature: domain Description: COG3666 Location: 799927-800398 bp Feature: domain Description: DDE_Tnp_1_6 Location: 800875-801229 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 800875-801 229 bp Feature: gene Location: 801897-803174 bp Ori: AIK75474.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 802101-802716 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8021 01 -80271 6 bp Feature: domain Description: GIIM Note: maturase Location: 802770-802986 bp Feature: domain Description: GIIM Note: maturase Location: 802770-802986 bp Feature: gene Location: 803240-804052 bp Ori: AIK75475.1 Feature: domain Description: YcgQ Location: 803243-804050 bp Feature: domain Description: YcgQ Location: 803243-804050 bp Feature: gene Location: 804052-804954 bp Ori: AIK75476.1 Feature: domain Description: YraQ Location: 804055-804952 bp Feature: domain Description: YraQ Location: 804055-804952 bp Feature: gene Location: 825274-825747 bp Ori: AIK75499.1 Feature: domain Description: YbaK_deacylase Location: 825310-825739 bp Feature: domain Description: YbaK_deacylase Location: 82531 0-825739 bp Feature: gene Location: 826042-826659 bp Ori: AIK75500.1 Feature: domain Description: NDUFA9_like_SDR_a Location: 826045-826624 bp Feature: domain Description: NDUFA9_like_SDR_a Location: 826045-826624 bp Feature: gene Location: 827251-828528 bp Ori: AIK75501.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 827455-828070 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 827455-828070 bp Feature: domain Description: GIIM Note: maturase Location: 828124-828340 bp Feature: domain Description: GIIM Note: maturase Location: 8281 24-828340 bp Feature: gene Location: 828578-829990 bp Ori: AIK75502.1 Feature: domain Description: COG3666 Location: 828593-829064 bp Feature: domain Description: COG3666 Location: 828593-829064 bp Feature: domain Description: DDE_Tnp_1_6 Location: 829541-829898 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 829541 -829898 bp Feature: gene Location: 830113-830961 bp Ori: AIK75503.1 Feature: domain Description: GH25_PlyB-like Location: 830317-830902 bp Feature: domain Description: GH25_PlyB-like Location: 83031 7-830902 bp Feature: gene Location: 975957-977714 bp Ori: AIK75629.1 Feature: domain Description: PRK11856 Location: 975960-976308 bp Feature: domain Description: PRK1 1 856 Location: 975960-976308 bp Feature: domain Description: lipoamide_DH Location: 976335-977694 bp Feature: domain Description: lipoamide_DH Location: 976335-977694 bp Feature: gene Location: 977812-978801 bp Ori: AIK75630.1 Feature: domain Description: lipoyltrans Location: 977827-978775 bp Feature: domain Description: lipoyltrans Location: 977827-978775 bp Feature: gene Location: 979423-980700 bp Ori: AIK75631.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 979627-980242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 979627-980242 bp Feature: domain Description: GIIM Note: maturase Location: 980296-980512 bp Feature: domain Description: GIIM Note: maturase Location: 980296-98051 2 bp Feature: gene Location: 980766-981551 bp Ori: AIK75632.1 Feature: domain Description: COG3442 Location: 980814-981540 bp Feature: domain Description: COG3442 Location: 98081 4-981 540 bp Feature: gene Location: 981551-982894 bp Ori: AIK75633.1 Feature: domain Description: MurE Location: 981584-982889 bp Feature: domain Description: MurE Location: 981 584-982889 bp Feature: gene Location: 1043304-1044047 bp Ori: AIK75684.1 Feature: domain Description: SrtA Location: 1043358-1043979 bp Feature: domain Description: SrtA Location: 1 043358-1 043979 bp Feature: gene Location: 1044063-1044476 bp Ori: AIK75685.1 Feature: domain Description: VOC_Bs_YwkD_like Location: 1044078-1044474 bp Feature: domain Description: VOC_Bs_YwkD_like Location: 1 044078-1 044474 bp Feature: gene Location: 1045067-1046344 bp Ori: AIK75686.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1045271-1045886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 045271 -1 045886 bp Feature: domain Description: GIIM Note: maturase Location: 1045940-1046156 bp Feature: domain Description: GIIM Note: maturase Location: 1 045940-1 0461 56 bp Feature: gene Location: 1046394-1047806 bp Ori: AIK75687.1 Feature: domain Description: COG3666 Location: 1046409-1046880 bp Feature: domain Description: COG3666 Location: 1 046409-1 046880 bp Feature: domain Description: DDE_Tnp_1_6 Location: 1047357-1047714 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 1 047357-1 04771 4 bp Feature: gene Location: 1047963-1049090 bp Ori: AIK75688.1 Feature: domain Description: KefB Location: 1047966-1049085 bp Feature: domain Description: KefB Location: 1 047966-1 049085 bp Feature: gene Location: 1207118-1208005 bp Ori: AIK75837.1 Feature: domain Description: CE4_NodB_like_5s_6s Location: 1207532-1207958 bp Feature: domain Description: CE4_NodB_like_5s_6s Location: 1 207532-1 207958 bp Feature: gene Location: 1208125-1209537 bp Ori: AIK75838.1 Feature: domain Description: COG3666 Location: 1208140-1208611 bp Feature: domain Description: COG3666 Location: 1 2081 40-1 20861 1 bp Feature: domain Description: DDE_Tnp_1_6 Location: 1209088-1209445 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 1 209088-1 209445 bp Feature: gene Location: 1209587-1210864 bp Ori: AIK75839.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1209791-1210406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 209791 -1 21 0406 bp Feature: domain Description: GIIM Note: maturase Location: 1210460-1210676 bp Feature: domain Description: GIIM Note: maturase Location: 1 21 0460-1 21 0676 bp Feature: gene Location: 1211443-1212990 bp Ori: AIK75840.1 Feature: domain Description: BetT Location: 1211455-1212925 bp Feature: domain Description: BetT Location: 1 21 1 455-1 21 2925 bp Feature: gene Location: 1213133-1214509 bp Ori: AIK75841.1 Feature: domain Description: ALDH_SSADH1_GabD1 Location: 1213211-1214492 bp Feature: domain Description: ALDH_SSADH1 _GabD1 Location: 1 21 321 1 -1 21 4492 bp Feature: gene Location: 1609405-1610082 bp Ori: AIK76210.1 Feature: domain Description: DUF4956 Location: 1609492-1609855 bp Feature: domain Description: DUF4956 Location: 1 609492-1 609855 bp Feature: gene Location: 1610134-1610745 bp Ori: AIK76211.1 Feature: domain Description: PolyPPase_VTC_like Location: 1610137-1610710 bp Feature: domain Description: PolyPPase_VTC_like Location: 1 61 01 37-1 61 071 0 bp Feature: gene Location: 1611197-1612474 bp Ori: AIK76212.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1611401-1612016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 61 1 401 -1 61 201 6 bp Feature: domain Description: GIIM Note: maturase Location: 1612070-1612286 bp Feature: domain Description: GIIM Note: maturase Location: 1 61 2070-1 61 2286 bp Feature: gene Location: 1613050-1614387 bp Ori: AIK76213.1 Feature: domain Description: Branch_AA_trans Location: 1613059-1614343 bp Feature: domain Description: Branch_AA_trans Location: 1 61 3059-1 61 4343 bp Feature: gene Location: 1614583-1616580 bp Ori: AIK76214.1 Feature: domain Description: PRK12267 Location: 1614592-1616575 bp Feature: domain Description: PRK1 2267 Location: 1 61 4592-1 61 6575 bp Feature: gene Location: 1627657-1628748 bp Ori: AIK76226.1 Feature: domain Description: PRK05355 Location: 1627663-1628743 bp Feature: domain Description: PRK05355 Location: 1 627663-1 628743 bp Feature: gene Location: 1628881-1629516 bp Ori: AIK76227.1 Feature: domain Description: CutC Location: 1628890-1629508 bp Feature: domain Description: CutC Location: 1 628890-1 629508 bp Feature: gene Location: 1630330-1631607 bp Ori: AIK76228.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1630534-1631149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 630534-1 631 1 49 bp Feature: domain Description: GIIM Note: maturase Location: 1631203-1631419 bp Feature: domain Description: GIIM Note: maturase Location: 1 631 203-1 631 41 9 bp Feature: gene Location: 1631657-1633069 bp Ori: AIK76229.1 Feature: domain Description: COG3666 Location: 1631672-1632143 bp Feature: domain Description: COG3666 Location: 1 631 672-1 6321 43 bp Feature: domain Description: DDE_Tnp_1_6 Location: 1632620-1632977 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 1 632620-1 632977 bp Feature: gene Location: 1633211-1634080 bp Ori: AIK76230.1 Feature: domain Description: RsmI Location: 1633256-1634075 bp Feature: domain Description: RsmI Location: 1 633256-1 634075 bp Feature: gene Location: 1767666-1768610 bp Ori: AIK76363.1 Feature: domain Description: EcCorA_ZntB-like_u2 Location: 1767735-1768608 bp Feature: domain Description: EcCorA_ZntB-like_u2 Location: 1 767735-1 768608 bp Feature: gene Location: 1768780-1769019 bp Ori: AIK76364.1 Feature: domain Description: rpsR Location: 1768789-1769014 bp Feature: domain Description: rpsR Location: 1 768789-1 76901 4 bp Feature: gene Location: 1769187-1770506 bp Ori: AIK76365.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1769487-1770120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 769487-1 7701 20 bp Feature: domain Description: GIIM Note: maturase Location: 1770189-1770411 bp Feature: domain Description: GIIM Note: maturase Location: 1 7701 89-1 77041 1 bp Feature: gene Location: 1771087-1771578 bp Ori: AIK76366.1 Feature: domain Description: PRK07275 Location: 1771090-1771576 bp Feature: domain Description: PRK07275 Location: 1 771 090-1 771 576 bp Feature: gene Location: 1771590-1771877 bp Ori: AIK76367.1 Feature: domain Description: rpsF Location: 1771593-1771875 bp Feature: domain Description: rpsF Location: 1 771 593-1 771 875 bp Feature: gene Location: 1783365-1783847 bp Ori: AIK76378.1 Feature: domain Description: Ninjurin Location: 1783404-1783617 bp Feature: domain Description: Ninjurin Location: 1 783404-1 78361 7 bp Feature: gene Location: 1783975-1785387 bp Ori: AIK76379.1 Feature: domain Description: COG3666 Location: 1783990-1784461 bp Feature: domain Description: COG3666 Location: 1 783990-1 784461 bp Feature: domain Description: DDE_Tnp_1_6 Location: 1784938-1785295 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 1 784938-1 785295 bp Feature: gene Location: 1785437-1786714 bp Ori: AIK76380.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1785641-1786256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 785641 -1 786256 bp Feature: domain Description: GIIM Note: maturase Location: 1786310-1786526 bp Feature: domain Description: GIIM Note: maturase Location: 1 78631 0-1 786526 bp Feature: gene Location: 1787338-1788447 bp Ori: AIK76381.1 Feature: domain Description: PRK02406 Location: 1787410-1788427 bp Feature: domain Description: PRK02406 Location: 1 78741 0-1 788427 bp Feature: gene Location: 1788617-1790929 bp Ori: AIK76382.1 Feature: domain Description: pyr_form_ly_1 Location: 1788659-1790903 bp Feature: domain Description: pyr_form_ly_1 Location: 1 788659-1 790903 bp Feature: gene Location: 2044283-2044489 bp Ori: AIK76621.1 Feature: domain Description: PLDc_N Location: 2044349-2044472 bp Feature: domain Description: PLDc_N Location: 2044349-2044472 bp Feature: gene Location: 2044491-2045567 bp Ori: AIK76622.1 Feature: domain Description: HipB Location: 2044494-2044818 bp Feature: domain Description: HipB Location: 2044494-204481 8 bp Feature: gene Location: 2045704-2046981 bp Ori: AIK76623.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2045908-2046523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2045908-2046523 bp Feature: domain Description: GIIM Note: maturase Location: 2046577-2046793 bp Feature: domain Description: GIIM Note: maturase Location: 2046577-2046793 bp Feature: gene Location: 2048083-2048271 bp Feature: gene Location: 2048287-2048901 bp Ori: AIK76625.1 Feature: domain Description: PAP2_like_2 Location: 2048356-2048881 bp Feature: domain Description: PAP2_like_2 Location: 2048356-2048881 bp Feature: gene Location: 2148110-2148781 bp Ori: AIK76719.1 Feature: domain Description: OmpR Location: 2148113-2148773 bp Feature: domain Description: OmpR Location: 21 481 1 3-21 48773 bp Feature: gene Location: 2148765-2150129 bp Ori: AIK76720.1 Feature: domain Description: BaeS Location: 2149104-2150118 bp Feature: domain Description: BaeS Location: 21 491 04-21 501 1 8 bp Feature: gene Location: 2150205-2151482 bp Ori: AIK76721.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2150409-2151024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 50409-21 51 024 bp Feature: domain Description: GIIM Note: maturase Location: 2151078-2151294 bp Feature: domain Description: GIIM Note: maturase Location: 21 51 078-21 51 294 bp Feature: gene Location: 2152095-2153648 bp Ori: AIK76722.1 Feature: domain Description: YfcC Location: 2152122-2153643 bp Feature: domain Description: YfcC Location: 21 521 22-21 53643 bp Feature: gene Location: 2153742-2154668 bp Ori: AIK76723.1 Feature: domain Description: PRK12353 Location: 2153748-2154666 bp Feature: domain Description: PRK1 2353 Location: 21 53748-21 54666 bp Feature: gene Location: 2203637-2204746 bp Ori: AIK76774.1 Feature: domain Description: recf Location: 2203640-2204714 bp Feature: domain Description: recf Location: 2203640-220471 4 bp Feature: gene Location: 2204856-2206268 bp Ori: AIK76775.1 Feature: domain Description: COG3666 Location: 2204871-2205342 bp Feature: domain Description: COG3666 Location: 2204871 -2205342 bp Feature: domain Description: DDE_Tnp_1_6 Location: 2205819-2206176 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 220581 9-22061 76 bp Feature: gene Location: 2206318-2207595 bp Ori: AIK76776.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2206522-2207137 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2206522-22071 37 bp Feature: domain Description: GIIM Note: maturase Location: 2207191-2207407 bp Feature: domain Description: GIIM Note: maturase Location: 22071 91 -2207407 bp Feature: gene Location: 2208179-2209045 bp Ori: AIK76777.1 Feature: domain Description: Sugar_transport Location: 2208194-2209034 bp Feature: domain Description: Sugar_transport Location: 22081 94-2209034 bp Feature: gene Location: 2209101-2209763 bp Ori: AIK76778.1 Feature: domain Description: HTH_XRE Location: 2209116-2209281 bp Feature: domain Description: HTH_XRE Location: 22091 1 6-2209281 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transf_6 (pfam06042), DUF2992 (pfam11208), RVT-GII, GIIM (pfam08388), PRK08295 (RNA polymerase sporulation sigma factor SigH), PhoE (COG0406), PRK02315 (adaptor protein MecA), Rfe (COG0472), COG3666 (Transposase ), DDE_Tnp_1_6 (pfam13751)
SufC (COG0396), PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional), DUF1033 (pfam06279), PulE (COG2804), YccU (COG1832), Fur (COG0735), YSIRK_signal (TIGR01168), SSURE (pfam11966), OmpR (COG0745), TTHA1623-like_MBL-fold (cd16322)
PRK08643 ((S)-acetoin forming diacetyl reductase), PRK07246 (bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon; Validated), PRK05764 (aspartate aminotransferase; Provisional), PHA02517 (putative transposase OrfB; Reviewed), yjbJ (COG3237), FtsW (COG0772), Gph (COG0546), Glyco_hydro_3 (pfam00933), PepP (COG0006), PRK10416 (signal recognition particle-docking protein FtsY; Provisional)
YcgQ (COG3689), YraQ (COG0701), YbaK_deacylase (cd00002), NDUFA9_like_SDR_a (cd05271), GH25_PlyB-like (cd06523), PRK11856 (branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed), lipoamide_DH (TIGR01350), lipoyltrans (TIGR00545), COG3442 (Glutamine amidotransferase related to the GATase domain of CobQ ), MurE (COG0769)
SrtA (COG3764), VOC_Bs_YwkD_like (cd08352), KefB (COG0475), CE4_NodB_like_5s_6s (cd10918), BetT (COG1292), ALDH_SSADH1_GabD1 (cd07100), DUF4956 (pfam16316), PolyPPase_VTC_like (cd07750), Branch_AA_trans (pfam05525), PRK12267 (methionyl-tRNA synthetase; Reviewed)
PRK05355 (3-phosphoserine/phosphohydroxythreonine transaminase), CutC (pfam03932), RsmI (COG0313), EcCorA_ZntB-like_u2 (cd12827), rpsR (PRK00391), PRK07275 (single-stranded DNA-binding protein; Provisional), rpsF (PRK14074), Ninjurin (pfam04923), PRK02406 (DNA polymerase IV; Validated), pyr_form_ly_1 (TIGR01255)
PLDc_N (pfam13396), HipB (COG1396), PAP2_like_2 (cd03392), BaeS (COG0642), YfcC (COG1288), PRK12353 (putative amino acid kinase; Reviewed), recf (TIGR00611), Sugar_transport (pfam06800), HTH_XRE (smart00530)