myRT

myRT report for GCA_000831125.1_ASM83112v1

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Seq: CP007571.1 Streptococcus agalactiae strain GBS2-NM, complete genome (2214297 bp)
Overview 1 RT 1: 104845-109363 bp 2 RT 2: 156407-162648 bp 3 RT 3: 193901-202432 bp 4 RT 4: 412429-417799 bp 5 RT 5: 514742-520945 bp 6 RT 6: 551674-559041 bp 7 RT 7: 806158-812937 bp 8 RT 8: 829992-836621 bp 9 RT 9: 982769-989701 bp 10 RT 10: 1046994-1052775 bp 11 RT 11: 1209449-1218282 bp 12 RT 12: 1613143-1620313 bp 13 RT 13: 1778526-1786064 bp 14 RT 14: 2132247-2138803 bp 15 RT 15: 2188022-2193666 bp Neighborhood of RT #1 [104845, 109386] NTP_transf_6 DUF2992 RVT-GII GIIM PRK08295 PhoE Neighborhood of RT #2 [156407, 162674] PRK02315 Rfe RVT-GII GIIM COG3666 DDE_Tnp_1_6 SufC Neighborhood of RT #3 [193901, 202596] PRK00566 DUF1033 RVT-GII GIIM COG3666 DDE_Tnp_1_6 PulE Neighborhood of RT #4 [412429, 417804] YccU Fur RVT-GII GIIM YSIRK_signal SSURE SSURE OmpR Neighborhood of RT #5 [514742, 520950] McsA ClpA YkuJ RVT-GII GIIM HisM GlnQ Neighborhood of RT #6 [551674, 559055] TTHA1623-like_MBL-fold PRK08643 RVT-GII GIIM PRK07246 PRK05764 Neighborhood of RT #7 [806158, 812939] PRK10416 COG3666 DDE_Tnp_1_6 RVT-GII GIIM YcgQ YraQ Neighborhood of RT #8 [829992, 836659] LysU HAD_Neu5Ac-Pase_like RVT-GII GIIM COG3666 DDE_Tnp_1_6 His_Phos_1 Neighborhood of RT #9 [982769, 989706] PRK11856 lipoamide_DH lipoyltrans RVT-GII GIIM COG3442 MurE Neighborhood of RT #10 [1046994, 1052780] SrtA VOC_Bs_YwkD_like RVT-GII GIIM COG3666 DDE_Tnp_1_6 KefB Neighborhood of RT #11 [1209449, 1218299] PRK06349 COG3666 DDE_Tnp_1_6 RVT-GII GIIM BetT ALDH_SSADH1_GabD1 Neighborhood of RT #12 [1613143, 1620318] DUF4956 PolyPPase_VTC_like RVT-GII GIIM Branch_AA_trans PRK12267 Neighborhood of RT #13 [1778526, 1786090] Ninjurin COG3666 DDE_Tnp_1_6 RVT-GII GIIM PRK02406 pyr_form_ly_1 Neighborhood of RT #14 [2132247, 2138805] OmpR BaeS RVT-GII GIIM YfcC PRK12353 Neighborhood of RT #15 [2188022, 2194148] recf COG3666 DDE_Tnp_1_6 RVT-GII GIIM Sugar_transport HTH_XRE Feature: gene Location: 104845-105396 bp Ori: AIK72781.1 Feature: domain Description: NTP_transf_6 Location: 104905-105385 bp Feature: domain Description: NTP_transf_6 Location: 1 04905-1 05385 bp Feature: gene Location: 105616-106035 bp Ori: AIK72782.1 Feature: domain Description: DUF2992 Location: 105625-106033 bp Feature: domain Description: DUF2992 Location: 1 05625-1 06033 bp Feature: gene Location: 106599-107876 bp Ori: AIK72783.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106803-107418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 06803-1 0741 8 bp Feature: domain Description: GIIM Note: maturase Location: 107472-107688 bp Feature: domain Description: GIIM Note: maturase Location: 1 07472-1 07688 bp Feature: gene Location: 108092-108571 bp Ori: AIK72784.1 Feature: domain Description: PRK08295 Location: 108107-108332 bp Feature: domain Description: PRK08295 Location: 1 081 07-1 08332 bp Feature: gene Location: 108694-109386 bp Ori: AIK72785.1 Feature: domain Description: PhoE Location: 108703-109363 bp Feature: domain Description: PhoE Location: 1 08703-1 09363 bp Feature: gene Location: 156407-157162 bp Ori: AIK72830.1 Feature: domain Description: PRK02315 Location: 156410-157154 bp Feature: domain Description: PRK0231 5 Location: 1 5641 0-1 571 54 bp Feature: gene Location: 157164-158324 bp Ori: AIK72831.1 Feature: domain Description: Rfe Location: 157185-158145 bp Feature: domain Description: Rfe Location: 1 571 85-1 581 45 bp Feature: gene Location: 158900-160177 bp Ori: AIK72832.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 159104-159719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 591 04-1 5971 9 bp Feature: domain Description: GIIM Note: maturase Location: 159773-159989 bp Feature: domain Description: GIIM Note: maturase Location: 1 59773-1 59989 bp Feature: gene Location: 160227-161639 bp Ori: AIK72833.1 Feature: domain Description: COG3666 Location: 160242-160713 bp Feature: domain Description: COG3666 Location: 1 60242-1 6071 3 bp Feature: domain Description: DDE_Tnp_1_6 Location: 161190-161547 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 1 61 1 90-1 61 547 bp Feature: gene Location: 161904-162674 bp Ori: AIK72834.1 Feature: domain Description: SufC Location: 161907-162648 bp Feature: domain Description: SufC Location: 1 61 907-1 62648 bp Feature: gene Location: 193901-197551 bp Ori: AIK72854.1 Feature: domain Description: PRK00566 Location: 193916-197480 bp Feature: domain Description: PRK00566 Location: 1 9391 6-1 97480 bp Feature: gene Location: 197665-198030 bp Ori: AIK72855.1 Feature: domain Description: DUF1033 Location: 197668-198004 bp Feature: domain Description: DUF1 033 Location: 1 97668-1 98004 bp Feature: gene Location: 198721-199998 bp Ori: AIK72856.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 198925-199540 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 98925-1 99540 bp Feature: domain Description: GIIM Note: maturase Location: 199594-199810 bp Feature: domain Description: GIIM Note: maturase Location: 1 99594-1 9981 0 bp Feature: gene Location: 200048-201460 bp Ori: AIK72857.1 Feature: domain Description: COG3666 Location: 200063-200534 bp Feature: domain Description: COG3666 Location: 200063-200534 bp Feature: domain Description: DDE_Tnp_1_6 Location: 201011-201368 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 201 01 1 -201 368 bp Feature: gene Location: 201625-202596 bp Ori: AIK72858.1 Feature: domain Description: PulE Location: 201628-202432 bp Feature: domain Description: PulE Location: 201 628-202432 bp Feature: gene Location: 412429-412869 bp Ori: AIK73062.1 Feature: domain Description: YccU Location: 412450-412855 bp Feature: domain Description: YccU Location: 41 2450-41 2855 bp Feature: gene Location: 412951-413424 bp Ori: AIK73063.1 Feature: domain Description: Fur Location: 412996-413407 bp Feature: domain Description: Fur Location: 41 2996-41 3407 bp Feature: gene Location: 413481-414758 bp Ori: AIK73064.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 413685-414300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 3685-41 4300 bp Feature: domain Description: GIIM Note: maturase Location: 414354-414570 bp Feature: domain Description: GIIM Note: maturase Location: 41 4354-41 4570 bp Feature: gene Location: 415440-417005 bp Ori: AIK73065.1 Feature: domain Description: YSIRK_signal Location: 415455-415545 bp Feature: domain Description: YSIRK_signal Location: 41 5455-41 5545 bp Feature: domain Description: SSURE Location: 415998-416235 bp Feature: domain Description: SSURE Location: 41 5998-41 6235 bp Feature: domain Description: SSURE Location: 416448-416688 bp Feature: domain Description: SSURE Location: 41 6448-41 6688 bp Feature: gene Location: 417118-417804 bp Ori: AIK73066.1 Feature: domain Description: OmpR Location: 417130-417799 bp Feature: domain Description: OmpR Location: 41 71 30-41 7799 bp Feature: gene Location: 514742-517003 bp Ori: AIK73153.1 Feature: domain Description: McsA Location: 514745-514844 bp Feature: domain Description: McsA Location: 51 4745-51 4844 bp Feature: domain Description: ClpA Location: 515042-516956 bp Feature: domain Description: ClpA Location: 51 5042-51 6956 bp Feature: gene Location: 517301-517531 bp Ori: AIK73154.1 Feature: domain Description: YkuJ Location: 517307-517529 bp Feature: domain Description: YkuJ Location: 51 7307-51 7529 bp Feature: gene Location: 518082-519359 bp Ori: AIK73155.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 518286-518901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 8286-51 8901 bp Feature: domain Description: GIIM Note: maturase Location: 518955-519171 bp Feature: domain Description: GIIM Note: maturase Location: 51 8955-51 91 71 bp Feature: gene Location: 519531-520223 bp Ori: AIK73156.1 Feature: domain Description: HisM Location: 519540-520200 bp Feature: domain Description: HisM Location: 51 9540-520200 bp Feature: gene Location: 520216-520950 bp Ori: AIK73157.1 Gene: glnQ Feature: domain Description: GlnQ Location: 520231-520945 bp Feature: domain Description: GlnQ Location: 520231 -520945 bp Feature: gene Location: 551674-552372 bp Ori: AIK73186.1 Feature: domain Description: TTHA1623-like_MBL-fold Location: 551773-552364 bp Feature: domain Description: TTHA1 623-like_MBL-fold Location: 551 773-552364 bp Feature: gene Location: 552540-553304 bp Ori: AIK73187.1 Feature: domain Description: PRK08643 Location: 552543-553302 bp Feature: domain Description: PRK08643 Location: 552543-553302 bp Feature: gene Location: 553867-555144 bp Ori: AIK73188.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 554071-554686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 554071 -554686 bp Feature: domain Description: GIIM Note: maturase Location: 554740-554956 bp Feature: domain Description: GIIM Note: maturase Location: 554740-554956 bp Feature: gene Location: 555269-557776 bp Ori: AIK73189.1 Feature: domain Description: PRK07246 Location: 555314-557774 bp Feature: domain Description: PRK07246 Location: 55531 4-557774 bp Feature: gene Location: 557862-559055 bp Ori: AIK73190.1 Feature: domain Description: PRK05764 Location: 557868-559041 bp Feature: domain Description: PRK05764 Location: 557868-559041 bp Feature: gene Location: 806158-807768 bp Ori: AIK73427.1 Feature: domain Description: PRK10416 Location: 806497-807757 bp Feature: domain Description: PRK1 041 6 Location: 806497-807757 bp Feature: gene Location: 807897-809393 bp Ori: AIK73428.1 Feature: domain Description: COG3666 Location: 807912-808383 bp Feature: domain Description: COG3666 Location: 80791 2-808383 bp Feature: domain Description: DDE_Tnp_1_6 Location: 808860-809214 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 808860-80921 4 bp Feature: gene Location: 809882-811159 bp Ori: AIK73429.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 810086-810701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 0086-81 0701 bp Feature: domain Description: GIIM Note: maturase Location: 810755-810971 bp Feature: domain Description: GIIM Note: maturase Location: 81 0755-81 0971 bp Feature: gene Location: 811225-812037 bp Ori: AIK73430.1 Feature: domain Description: YcgQ Location: 811228-812035 bp Feature: domain Description: YcgQ Location: 81 1 228-81 2035 bp Feature: gene Location: 812037-812939 bp Ori: AIK73431.1 Feature: domain Description: YraQ Location: 812040-812937 bp Feature: domain Description: YraQ Location: 81 2040-81 2937 bp Feature: gene Location: 829992-831482 bp Ori: AIK73450.1 Feature: domain Description: LysU Location: 830004-831480 bp Feature: domain Description: LysU Location: 830004-831 480 bp Feature: gene Location: 831657-832559 bp Ori: AIK73451.1 Feature: domain Description: HAD_Neu5Ac-Pase_like Location: 831672-832269 bp Feature: domain Description: HAD_Neu5Ac-Pase_like Location: 831 672-832269 bp Feature: gene Location: 833150-834427 bp Ori: AIK73452.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 833354-833969 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 833354-833969 bp Feature: domain Description: GIIM Note: maturase Location: 834023-834239 bp Feature: domain Description: GIIM Note: maturase Location: 834023-834239 bp Feature: gene Location: 834477-835889 bp Ori: AIK73453.1 Feature: domain Description: COG3666 Location: 834492-834963 bp Feature: domain Description: COG3666 Location: 834492-834963 bp Feature: domain Description: DDE_Tnp_1_6 Location: 835440-835797 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 835440-835797 bp Feature: gene Location: 836018-836659 bp Ori: AIK73454.1 Feature: domain Description: His_Phos_1 Location: 836027-836621 bp Feature: domain Description: His_Phos_1 Location: 836027-836621 bp Feature: gene Location: 982769-984526 bp Ori: AIK73582.1 Feature: domain Description: PRK11856 Location: 982772-983120 bp Feature: domain Description: PRK1 1 856 Location: 982772-9831 20 bp Feature: domain Description: lipoamide_DH Location: 983147-984506 bp Feature: domain Description: lipoamide_DH Location: 9831 47-984506 bp Feature: gene Location: 984624-985613 bp Ori: AIK73583.1 Feature: domain Description: lipoyltrans Location: 984639-985587 bp Feature: domain Description: lipoyltrans Location: 984639-985587 bp Feature: gene Location: 986235-987512 bp Ori: AIK73584.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 986439-987054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 986439-987054 bp Feature: domain Description: GIIM Note: maturase Location: 987108-987324 bp Feature: domain Description: GIIM Note: maturase Location: 9871 08-987324 bp Feature: gene Location: 987578-988363 bp Ori: AIK73585.1 Feature: domain Description: COG3442 Location: 987626-988352 bp Feature: domain Description: COG3442 Location: 987626-988352 bp Feature: gene Location: 988363-989706 bp Ori: AIK73586.1 Feature: domain Description: MurE Location: 988396-989701 bp Feature: domain Description: MurE Location: 988396-989701 bp Feature: gene Location: 1046994-1047737 bp Ori: AIK73635.1 Feature: domain Description: SrtA Location: 1047048-1047669 bp Feature: domain Description: SrtA Location: 1 047048-1 047669 bp Feature: gene Location: 1047753-1048166 bp Ori: AIK73636.1 Feature: domain Description: VOC_Bs_YwkD_like Location: 1047768-1048164 bp Feature: domain Description: VOC_Bs_YwkD_like Location: 1 047768-1 0481 64 bp Feature: gene Location: 1048757-1050034 bp Ori: AIK73637.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1048961-1049576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 048961 -1 049576 bp Feature: domain Description: GIIM Note: maturase Location: 1049630-1049846 bp Feature: domain Description: GIIM Note: maturase Location: 1 049630-1 049846 bp Feature: gene Location: 1050084-1051496 bp Ori: AIK73638.1 Feature: domain Description: COG3666 Location: 1050099-1050570 bp Feature: domain Description: COG3666 Location: 1 050099-1 050570 bp Feature: domain Description: DDE_Tnp_1_6 Location: 1051047-1051404 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 1 051 047-1 051 404 bp Feature: gene Location: 1051653-1052780 bp Ori: AIK73639.1 Feature: domain Description: KefB Location: 1051656-1052775 bp Feature: domain Description: KefB Location: 1 051 656-1 052775 bp Feature: gene Location: 1209449-1210732 bp Ori: AIK73789.1 Feature: domain Description: PRK06349 Location: 1209455-1210706 bp Feature: domain Description: PRK06349 Location: 1 209455-1 21 0706 bp Feature: gene Location: 1211915-1213327 bp Ori: AIK73790.1 Feature: domain Description: COG3666 Location: 1211930-1212401 bp Feature: domain Description: COG3666 Location: 1 21 1 930-1 21 2401 bp Feature: domain Description: DDE_Tnp_1_6 Location: 1212878-1213235 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 1 21 2878-1 21 3235 bp Feature: gene Location: 1213377-1214654 bp Ori: AIK73791.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1213581-1214196 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 21 3581 -1 21 41 96 bp Feature: domain Description: GIIM Note: maturase Location: 1214250-1214466 bp Feature: domain Description: GIIM Note: maturase Location: 1 21 4250-1 21 4466 bp Feature: gene Location: 1215233-1216780 bp Ori: AIK73792.1 Feature: domain Description: BetT Location: 1215245-1216715 bp Feature: domain Description: BetT Location: 1 21 5245-1 21 671 5 bp Feature: gene Location: 1216923-1218299 bp Ori: AIK73793.1 Feature: domain Description: ALDH_SSADH1_GabD1 Location: 1217001-1218282 bp Feature: domain Description: ALDH_SSADH1 _GabD1 Location: 1 21 7001 -1 21 8282 bp Feature: gene Location: 1613143-1613820 bp Ori: AIK74158.1 Feature: domain Description: DUF4956 Location: 1613230-1613593 bp Feature: domain Description: DUF4956 Location: 1 61 3230-1 61 3593 bp Feature: gene Location: 1613872-1614483 bp Ori: AIK74159.1 Feature: domain Description: PolyPPase_VTC_like Location: 1613875-1614448 bp Feature: domain Description: PolyPPase_VTC_like Location: 1 61 3875-1 61 4448 bp Feature: gene Location: 1614935-1616212 bp Ori: AIK74160.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1615139-1615754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 61 51 39-1 61 5754 bp Feature: domain Description: GIIM Note: maturase Location: 1615808-1616024 bp Feature: domain Description: GIIM Note: maturase Location: 1 61 5808-1 61 6024 bp Feature: gene Location: 1616788-1618125 bp Ori: AIK74161.1 Feature: domain Description: Branch_AA_trans Location: 1616797-1618081 bp Feature: domain Description: Branch_AA_trans Location: 1 61 6797-1 61 8081 bp Feature: gene Location: 1618321-1620318 bp Ori: AIK74162.1 Feature: domain Description: PRK12267 Location: 1618330-1620313 bp Feature: domain Description: PRK1 2267 Location: 1 61 8330-1 62031 3 bp Feature: gene Location: 1778526-1779008 bp Ori: AIK74322.1 Feature: domain Description: Ninjurin Location: 1778565-1778778 bp Feature: domain Description: Ninjurin Location: 1 778565-1 778778 bp Feature: gene Location: 1779136-1780548 bp Ori: AIK74323.1 Feature: domain Description: COG3666 Location: 1779151-1779622 bp Feature: domain Description: COG3666 Location: 1 7791 51 -1 779622 bp Feature: domain Description: DDE_Tnp_1_6 Location: 1780099-1780456 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 1 780099-1 780456 bp Feature: gene Location: 1780598-1781875 bp Ori: AIK74324.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1780802-1781417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 780802-1 781 41 7 bp Feature: domain Description: GIIM Note: maturase Location: 1781471-1781687 bp Feature: domain Description: GIIM Note: maturase Location: 1 781 471 -1 781 687 bp Feature: gene Location: 1782499-1783608 bp Ori: AIK74325.1 Feature: domain Description: PRK02406 Location: 1782571-1783588 bp Feature: domain Description: PRK02406 Location: 1 782571 -1 783588 bp Feature: gene Location: 1783778-1786090 bp Ori: AIK74326.1 Feature: domain Description: pyr_form_ly_1 Location: 1783820-1786064 bp Feature: domain Description: pyr_form_ly_1 Location: 1 783820-1 786064 bp Feature: gene Location: 2132247-2132918 bp Ori: AIK74653.1 Feature: domain Description: OmpR Location: 2132250-2132910 bp Feature: domain Description: OmpR Location: 21 32250-21 3291 0 bp Feature: gene Location: 2132902-2134266 bp Ori: AIK74654.1 Feature: domain Description: BaeS Location: 2133241-2134255 bp Feature: domain Description: BaeS Location: 21 33241 -21 34255 bp Feature: gene Location: 2134342-2135619 bp Ori: AIK74655.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2134546-2135161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 34546-21 351 61 bp Feature: domain Description: GIIM Note: maturase Location: 2135215-2135431 bp Feature: domain Description: GIIM Note: maturase Location: 21 3521 5-21 35431 bp Feature: gene Location: 2136232-2137785 bp Ori: AIK74656.1 Feature: domain Description: YfcC Location: 2136259-2137780 bp Feature: domain Description: YfcC Location: 21 36259-21 37780 bp Feature: gene Location: 2137879-2138805 bp Ori: AIK74657.1 Feature: domain Description: PRK12353 Location: 2137885-2138803 bp Feature: domain Description: PRK1 2353 Location: 21 37885-21 38803 bp Feature: gene Location: 2188022-2189131 bp Ori: AIK74709.1 Feature: domain Description: recf Location: 2188025-2189099 bp Feature: domain Description: recf Location: 21 88025-21 89099 bp Feature: gene Location: 2189241-2190653 bp Ori: AIK74710.1 Feature: domain Description: COG3666 Location: 2189256-2189727 bp Feature: domain Description: COG3666 Location: 21 89256-21 89727 bp Feature: domain Description: DDE_Tnp_1_6 Location: 2190204-2190561 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 21 90204-21 90561 bp Feature: gene Location: 2190703-2191980 bp Ori: AIK74711.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2190907-2191522 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 90907-21 91 522 bp Feature: domain Description: GIIM Note: maturase Location: 2191576-2191792 bp Feature: domain Description: GIIM Note: maturase Location: 21 91 576-21 91 792 bp Feature: gene Location: 2192564-2193430 bp Ori: AIK74712.1 Feature: domain Description: Sugar_transport Location: 2192579-2193419 bp Feature: domain Description: Sugar_transport Location: 21 92579-21 9341 9 bp Feature: gene Location: 2193486-2194148 bp Ori: AIK74713.1 Feature: domain Description: HTH_XRE Location: 2193501-2193666 bp Feature: domain Description: HTH_XRE Location: 21 93501 -21 93666 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transf_6 (pfam06042), DUF2992 (pfam11208), RVT-GII, GIIM (pfam08388), PRK08295 (RNA polymerase sporulation sigma factor SigH), PhoE (COG0406), PRK02315 (adaptor protein MecA), Rfe (COG0472), COG3666 (Transposase ), DDE_Tnp_1_6 (pfam13751)
SufC (COG0396), PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional), DUF1033 (pfam06279), PulE (COG2804), YccU (COG1832), Fur (COG0735), YSIRK_signal (TIGR01168), SSURE (pfam11966), OmpR (COG0745), McsA (COG3880)
ClpA (TIGR02639), YkuJ (COG4703), HisM (COG0765), GlnQ (COG1126), TTHA1623-like_MBL-fold (cd16322), PRK08643 ((S)-acetoin forming diacetyl reductase), PRK07246 (bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon; Validated), PRK05764 (aspartate aminotransferase; Provisional), PRK10416 (signal recognition particle-docking protein FtsY; Provisional), YcgQ (COG3689)
YraQ (COG0701), LysU (COG1190), HAD_Neu5Ac-Pase_like (cd04305), His_Phos_1 (pfam00300), PRK11856 (branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed), lipoamide_DH (TIGR01350), lipoyltrans (TIGR00545), COG3442 (Glutamine amidotransferase related to the GATase domain of CobQ ), MurE (COG0769), SrtA (COG3764)
VOC_Bs_YwkD_like (cd08352), KefB (COG0475), PRK06349 (homoserine dehydrogenase; Provisional), BetT (COG1292), ALDH_SSADH1_GabD1 (cd07100), DUF4956 (pfam16316), PolyPPase_VTC_like (cd07750), Branch_AA_trans (pfam05525), PRK12267 (methionyl-tRNA synthetase; Reviewed), Ninjurin (pfam04923)
PRK02406 (DNA polymerase IV; Validated), pyr_form_ly_1 (TIGR01255), BaeS (COG0642), YfcC (COG1288), PRK12353 (putative amino acid kinase; Reviewed), recf (TIGR00611), Sugar_transport (pfam06800), HTH_XRE (smart00530)