myRT

myRT report for GCA_000832385.1_ASM83238v1

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Seq: CP009299.1 Bacillus cereus D17 plasmid, complete sequence (210673 bp)
Overview 1 RT 1: 126636-130925 bp 2 RT 2: 135446-140678 bp 3 RT 3: 144275-153305 bp Neighborhood of RT #1 [126636, 130925] PRTRC_ThiF RVT-GII Intron_maturas2 HNHc E1_enzyme_family Neighborhood of RT #2 [135446, 140678] beta_clamp RVT-GII COG4712 Neighborhood of RT #3 [144275, 153305] rpsA nuc_hydro RVT_N RVT-GII GIIM TraG-D_C Ftsk_gamma Ftsk_gamma Feature: gene Location: 126636-127007 bp Feature: gene Location: 127027-127569 bp Ori: AJG56833.1 Feature: domain Description: PRTRC_ThiF Location: 127090-127549 bp Feature: domain Description: PRTRC_ThiF Location: 1 27090-1 27549 bp Feature: gene Location: 127821-129761 bp Ori: AJG56725.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 128151-128988 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 281 51 -1 28988 bp Feature: domain Description: Intron_maturas2 Location: 129126-129417 bp Feature: domain Description: Intron_maturas2 Location: 1 291 26-1 2941 7 bp Feature: domain Description: HNHc Note: nucleases Location: 129549-129708 bp Feature: domain Description: HNHc Note: nucleases Location: 1 29549-1 29708 bp Feature: gene Location: 130330-130512 bp Ori: AJG56855.1 Feature: domain Description: E1_enzyme_family Location: 130378-130498 bp Feature: domain Description: E1 _enzyme_family Location: 1 30378-1 30498 bp Feature: gene Location: 130515-130925 bp Feature: gene Location: 135446-136558 bp Ori: AJG56683.1 Gene: dnaN Feature: domain Description: beta_clamp Location: 135449-136553 bp Feature: domain Description: beta_clamp Location: 1 35449-1 36553 bp Feature: gene Location: 136639-137166 bp Feature: gene Location: 137244-139142 bp Ori: AJG56846.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 137559-138261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 37559-1 38261 bp Feature: gene Location: 139904-140260 bp Ori: AJG56774.1 Feature: domain Description: COG4712 Location: 139913-140255 bp Feature: domain Description: COG471 2 Location: 1 3991 3-1 40255 bp Feature: gene Location: 140283-140678 bp Feature: gene Location: 144275-145258 bp Ori: AJG56668.1 Feature: domain Description: rpsA Location: 144542-145079 bp Feature: domain Description: rpsA Location: 1 44542-1 45079 bp Feature: gene Location: 145872-146822 bp Ori: AJG56791.1 Feature: domain Description: nuc_hydro Location: 145887-146793 bp Feature: domain Description: nuc_hydro Location: 1 45887-1 46793 bp Feature: gene Location: 147542-149188 bp Ori: AJG56854.1 Feature: domain Description: RVT_N Location: 147584-147821 bp Feature: domain Description: RVT_N Location: 1 47584-1 47821 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 147875-148535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 47875-1 48535 bp Feature: domain Description: GIIM Note: maturase Location: 148604-148835 bp Feature: domain Description: GIIM Note: maturase Location: 1 48604-1 48835 bp Feature: gene Location: 149401-152901 bp Ori: AJG56727.1 Feature: domain Description: TraG-D_C Location: 151018-151378 bp Feature: domain Description: TraG-D_C Location: 1 51 01 8-1 51 378 bp Feature: domain Description: Ftsk_gamma Location: 151786-151963 bp Feature: domain Description: Ftsk_gamma Location: 1 51 786-1 51 963 bp Feature: domain Description: Ftsk_gamma Location: 152095-152230 bp Feature: domain Description: Ftsk_gamma Location: 1 52095-1 52230 bp Feature: gene Location: 152919-153305 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRTRC_ThiF (TIGR03736), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), E1_enzyme_family (cl22428), beta_clamp (cl29549), COG4712 (Uncharacterized protein ), rpsA (TIGR00717), nuc_hydro (cl00226), RVT_N (pfam13655)
GIIM (pfam08388), TraG-D_C (pfam12696), Ftsk_gamma (smart00843)

Seq: CP009300.1 Bacillus cereus D17, complete genome (5379685 bp)
Overview 1 RT 1: 795175-802943 bp 2 RT 2: 971951-984312 bp Neighborhood of RT #1 [795175, 802945] polC RVT-GII HNHc polC PRK00092 Neighborhood of RT #2 [971951, 984312] CcdC B_ant_repeat B_ant_repeat B_ant_repeat RVT-GII HNHc B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat Feature: gene Location: 795175-798087 bp Ori: AJG58658.1 Gene: polC Feature: domain Description: polC Location: 795193-798070 bp Feature: domain Description: polC Location: 795193-798070 bp Feature: gene Location: 798420-798638 bp Feature: gene Location: 798815-800629 bp Ori: AJG59509.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 799109-799805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 799109-799805 bp Feature: domain Description: HNHc Note: nucleases Location: 800351-800510 bp Feature: domain Description: HNHc Note: nucleases Location: 800351-800510 bp Feature: gene Location: 800691-802142 bp Ori: AJG57354.1 Feature: domain Description: polC Location: 800736-802140 bp Feature: domain Description: polC Location: 800736-802 140 bp Feature: gene Location: 802475-802945 bp Ori: AJG56983.1 Feature: domain Description: PRK00092 Location: 802481-802943 bp Feature: domain Description: PRK00092 Location: 802 481-802 943 bp Feature: gene Location: 971951-972457 bp Ori: AJG59873.1 Feature: domain Description: CcdC Location: 971960-972422 bp Feature: domain Description: CcdC Location: 971960-972 42 2 bp Feature: gene Location: 972520-973800 bp Ori: AJG62232.1 Feature: domain Description: B_ant_repeat Location: 972598-972709 bp Feature: domain Description: B_ant_repeat Location: 972 598-972 709 bp Feature: domain Description: B_ant_repeat Location: 972949-973105 bp Feature: domain Description: B_ant_repeat Location: 972 949-973105 bp Feature: domain Description: B_ant_repeat Location: 973348-973504 bp Feature: domain Description: B_ant_repeat Location: 973348-973504 bp Feature: gene Location: 974502-976430 bp Ori: AJG57075.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 974823-975558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97482 3-975558 bp Feature: domain Description: HNHc Note: nucleases Location: 976149-976314 bp Feature: domain Description: HNHc Note: nucleases Location: 976149-976314 bp Feature: gene Location: 976599-982964 bp Ori: AJG58306.1 Feature: domain Description: B_ant_repeat Location: 976608-976746 bp Feature: domain Description: B_ant_repeat Location: 976608-976746 bp Feature: domain Description: B_ant_repeat Location: 976983-977136 bp Feature: domain Description: B_ant_repeat Location: 976983-977136 bp Feature: domain Description: B_ant_repeat Location: 977373-977526 bp Feature: domain Description: B_ant_repeat Location: 977373-97752 6 bp Feature: domain Description: B_ant_repeat Location: 977766-977922 bp Feature: domain Description: B_ant_repeat Location: 977766-97792 2 bp Feature: domain Description: B_ant_repeat Location: 978162-978315 bp Feature: domain Description: B_ant_repeat Location: 978162 -978315 bp Feature: domain Description: B_ant_repeat Location: 978558-978714 bp Feature: domain Description: B_ant_repeat Location: 978558-978714 bp Feature: domain Description: B_ant_repeat Location: 978954-979110 bp Feature: domain Description: B_ant_repeat Location: 978954-979110 bp Feature: domain Description: B_ant_repeat Location: 979350-979503 bp Feature: domain Description: B_ant_repeat Location: 979350-979503 bp Feature: domain Description: B_ant_repeat Location: 979746-979902 bp Feature: domain Description: B_ant_repeat Location: 979746-979902 bp Feature: domain Description: B_ant_repeat Location: 980142-980295 bp Feature: domain Description: B_ant_repeat Location: 980142 -9802 95 bp Feature: domain Description: B_ant_repeat Location: 980538-980694 bp Feature: domain Description: B_ant_repeat Location: 980538-980694 bp Feature: domain Description: B_ant_repeat Location: 980934-981090 bp Feature: domain Description: B_ant_repeat Location: 980934-981090 bp Feature: domain Description: B_ant_repeat Location: 981330-981486 bp Feature: domain Description: B_ant_repeat Location: 981330-981486 bp Feature: domain Description: B_ant_repeat Location: 981726-981879 bp Feature: domain Description: B_ant_repeat Location: 98172 6-981879 bp Feature: domain Description: B_ant_repeat Location: 982122-982278 bp Feature: domain Description: B_ant_repeat Location: 982 12 2 -982 2 78 bp Feature: domain Description: B_ant_repeat Location: 982518-982674 bp Feature: domain Description: B_ant_repeat Location: 982 518-982 674 bp Feature: gene Location: 983242-984312 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT polC (TIGR00354), RVT-GII, HNHc (smart00507), PRK00092 (ribosome maturation protein RimP; Reviewed), CcdC (COG4846), B_ant_repeat (TIGR01451)