myRT

myRT report for GCA_000832765.1_ASM83276v1

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Seq: CP009595.1 Bacillus cereus strain 3a plasmid pBFC_3, complete sequence (312478 bp)
Overview 1 RT 1: 184749-192136 bp 2 RT 2: 215826-220473 bp 3 RT 3: 234056-240488 bp 4 RT 4: 248093-256671 bp 5 RT 5: 272093-278260 bp Neighborhood of RT #1 [184749, 192150] RVT_N RVT-GII GIIM nuc_hydro DEXXQc_Upf1-like KOG1803 Neighborhood of RT #2 [215826, 220580] RVT-GII HNHc E1_enzyme_family PRTRC_A Neighborhood of RT #3 [234056, 240488] DUF3854 RVT-GII GIIM HNHc Neighborhood of RT #4 [248093, 256769] Replic_Relax RVT-GII Intron_maturas2 HNHc TraG-D_C xerC Neighborhood of RT #5 [272093, 278260] TcpE AAA_10 RVT-GII HNHc AAA_10 Feature: gene Location: 184749-184976 bp Feature: gene Location: 185142-185384 bp Feature: gene Location: 185585-187231 bp Ori: AJH60240.1 Gene: ltrA Feature: domain Description: RVT_N Location: 185627-185864 bp Feature: domain Description: RVT_N Location: 1 85627-1 85864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 185918-186578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 8591 8-1 86578 bp Feature: domain Description: GIIM Note: maturase Location: 186647-186878 bp Feature: domain Description: GIIM Note: maturase Location: 1 86647-1 86878 bp Feature: gene Location: 187951-188901 bp Ori: AJH60210.1 Feature: domain Description: nuc_hydro Location: 187966-188872 bp Feature: domain Description: nuc_hydro Location: 1 87966-1 88872 bp Feature: gene Location: 189334-192150 bp Ori: AJH60420.1 Feature: domain Description: DEXXQc_Upf1-like Location: 190393-191602 bp Feature: domain Description: DEXXQc_Upf1 -like Location: 1 90393-1 91 602 bp Feature: domain Description: KOG1803 Location: 191818-192136 bp Feature: domain Description: KOG1 803 Location: 1 91 81 8-1 921 36 bp Feature: gene Location: 215826-215954 bp Feature: gene Location: 216016-216519 bp Feature: gene Location: 216607-218487 bp Ori: AJH60214.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 216937-217666 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 6937-21 7666 bp Feature: domain Description: HNHc Note: nucleases Location: 218224-218374 bp Feature: domain Description: HNHc Note: nucleases Location: 21 8224-21 8374 bp Feature: gene Location: 219187-219588 bp Ori: AJH60255.1 Feature: domain Description: E1_enzyme_family Location: 219235-219571 bp Feature: domain Description: E1 _enzyme_family Location: 21 9235-21 9571 bp Feature: gene Location: 219585-220580 bp Ori: AJH60377.1 Feature: domain Description: PRTRC_A Location: 220119-220473 bp Feature: domain Description: PRTRC_A Location: 2201 1 9-220473 bp Feature: gene Location: 234056-234286 bp Feature: gene Location: 234779-235963 bp Ori: AJH60247.1 Feature: domain Description: DUF3854 Location: 235610-235931 bp Feature: domain Description: DUF3854 Location: 23561 0-235931 bp Feature: gene Location: 236055-237950 bp Ori: AJH60223.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 236421-237120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 236421 -2371 20 bp Feature: domain Description: GIIM Note: maturase Location: 237204-237447 bp Feature: domain Description: GIIM Note: maturase Location: 237204-237447 bp Feature: domain Description: HNHc Note: nucleases Location: 237693-237831 bp Feature: domain Description: HNHc Note: nucleases Location: 237693-237831 bp Feature: gene Location: 238619-238762 bp Feature: gene Location: 238938-240488 bp Feature: gene Location: 248093-249643 bp Ori: AJH60181.1 Feature: domain Description: Replic_Relax Location: 248189-248912 bp Feature: domain Description: Replic_Relax Location: 2481 89-24891 2 bp Feature: gene Location: 249615-251303 bp Feature: gene Location: 251919-253736 bp Ori: AJH60301.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 252183-253014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2521 83-25301 4 bp Feature: domain Description: Intron_maturas2 Location: 253095-253386 bp Feature: domain Description: Intron_maturas2 Location: 253095-253386 bp Feature: domain Description: HNHc Note: nucleases Location: 253533-253710 bp Feature: domain Description: HNHc Note: nucleases Location: 253533-25371 0 bp Feature: gene Location: 253840-255237 bp Ori: AJH60340.1 Feature: domain Description: TraG-D_C Location: 253984-254347 bp Feature: domain Description: TraG-D_C Location: 253984-254347 bp Feature: gene Location: 255804-256769 bp Ori: AJH60317.1 Feature: domain Description: xerC Location: 255822-256671 bp Feature: domain Description: xerC Location: 255822-256671 bp Feature: gene Location: 272093-272497 bp Ori: AJH60415.1 Feature: domain Description: TcpE Location: 272129-272402 bp Feature: domain Description: TcpE Location: 2721 29-272402 bp Feature: gene Location: 272557-274092 bp Ori: AJH60446.1 Feature: domain Description: AAA_10 Location: 273898-274075 bp Feature: domain Description: AAA_1 0 Location: 273898-274075 bp Feature: gene Location: 274808-276640 bp Ori: AJH60305.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 275108-275813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2751 08-27581 3 bp Feature: domain Description: HNHc Note: nucleases Location: 276392-276524 bp Feature: domain Description: HNHc Note: nucleases Location: 276392-276524 bp Feature: gene Location: 276898-277776 bp Ori: AJH60266.1 Feature: domain Description: AAA_10 Location: 276904-277660 bp Feature: domain Description: AAA_1 0 Location: 276904-277660 bp Feature: gene Location: 277778-278260 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), nuc_hydro (cl00226), DEXXQc_Upf1-like (cd17934), KOG1803 (KOG1803, DNA helicase ), HNHc (smart00507), E1_enzyme_family (cl22428), PRTRC_A (TIGR03735), DUF3854 (pfam12965)
Replic_Relax (pfam13814), Intron_maturas2 (pfam01348), TraG-D_C (pfam12696), xerC (PRK01287), TcpE (pfam12648), AAA_10 (pfam12846)

Seq: CP009596.1 Bacillus cereus strain 3a, complete genome (5270991 bp)
Overview 1 RT 1: 429346-435331 bp 2 RT 2: 1569682-1581064 bp 3 RT 3: 1641496-1646508 bp 4 RT 4: 5095026-5100149 bp Neighborhood of RT #1 [429346, 435378] PRK12420 YbaK_EbsC RVT_N RVT-GII GIIM MTH1 Hit Neighborhood of RT #2 [1569682, 1581066] DUF2085 PRK12451 RVT-GII Intron_maturas2 HNHc SAM_MT YphP_YqiW DUF393 Nfu_N Virulence_fact HEAT RVT_N RVT-GII GIIM PRK06752 DUF4318 Neighborhood of RT #3 [1641496, 1646508] spore_ytfJ RVT_N RVT-GII GIIM Neighborhood of RT #4 [5095026, 5100247] caa3_CtaG amiF RVT-GII HNHc amiF YugN Feature: gene Location: 429346-430623 bp Ori: AJH61152.1 Gene: hisS Feature: domain Description: PRK12420 Location: 429349-430609 bp Feature: domain Description: PRK12 42 0 Location: 42 9349-430609 bp Feature: gene Location: 430964-431440 bp Ori: AJH63269.1 Feature: domain Description: YbaK_EbsC Location: 430982-431432 bp Feature: domain Description: YbaK_EbsC Location: 430982 -431432 bp Feature: gene Location: 432525-434171 bp Ori: AJH63871.1 Gene: ltrA Feature: domain Description: RVT_N Location: 432567-432804 bp Feature: domain Description: RVT_N Location: 432 567-432 804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 432858-433518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 432 858-433518 bp Feature: domain Description: GIIM Note: maturase Location: 433587-433818 bp Feature: domain Description: GIIM Note: maturase Location: 433587-433818 bp Feature: gene Location: 434392-434880 bp Ori: AJH65125.1 Feature: domain Description: MTH1 Location: 434401-434812 bp Feature: domain Description: MTH1 Location: 434401-434812 bp Feature: gene Location: 434905-435378 bp Ori: AJH60804.1 Feature: domain Description: Hit Location: 434941-435331 bp Feature: domain Description: Hit Location: 434941-435331 bp Feature: gene Location: 1569682-1569900 bp Ori: AJH65033.1 Feature: domain Description: DUF2085 Location: 1569715-1569898 bp Feature: domain Description: DUF2 085 Location: 1569715-1569898 bp Feature: gene Location: 1570015-1571703 bp Ori: AJH60787.1 Gene: argS Feature: domain Description: PRK12451 Location: 1570018-1571701 bp Feature: domain Description: PRK12 451 Location: 1570018-1571701 bp Feature: gene Location: 1572329-1574146 bp Ori: AJH62479.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1572593-1573424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1572 593-157342 4 bp Feature: domain Description: Intron_maturas2 Location: 1573505-1573796 bp Feature: domain Description: Intron_maturas2 Location: 1573505-1573796 bp Feature: domain Description: HNHc Note: nucleases Location: 1573943-1574120 bp Feature: domain Description: HNHc Note: nucleases Location: 1573943-157412 0 bp Feature: gene Location: 1574762-1575328 bp Ori: AJH62431.1 Feature: domain Description: SAM_MT Location: 1574885-1575317 bp Feature: domain Description: SAM_MT Location: 1574885-1575317 bp Feature: gene Location: 1575378-1575812 bp Ori: AJH62189.1 Feature: domain Description: YphP_YqiW Location: 1575402-1575810 bp Feature: domain Description: YphP_YqiW Location: 1575402 -1575810 bp Feature: gene Location: 1575896-1576279 bp Ori: AJH65056.1 Feature: domain Description: DUF393 Location: 1575905-1576223 bp Feature: domain Description: DUF393 Location: 1575905-15762 2 3 bp Feature: gene Location: 1576283-1577410 bp Ori: AJH61256.1 Feature: domain Description: Nfu_N Location: 1576301-1576547 bp Feature: domain Description: Nfu_N Location: 1576301-1576547 bp Feature: domain Description: Virulence_fact Location: 1576604-1576838 bp Feature: domain Description: Virulence_fact Location: 1576604-1576838 bp Feature: domain Description: HEAT Location: 1576949-1577399 bp Feature: domain Description: HEAT Location: 1576949-1577399 bp Feature: gene Location: 1577785-1579431 bp Ori: AJH63209.1 Gene: ltrA Feature: domain Description: RVT_N Location: 1577827-1578064 bp Feature: domain Description: RVT_N Location: 157782 7-1578064 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1578118-1578778 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1578118-1578778 bp Feature: domain Description: GIIM Note: maturase Location: 1578847-1579078 bp Feature: domain Description: GIIM Note: maturase Location: 1578847-1579078 bp Feature: gene Location: 1580318-1580650 bp Ori: AJH64068.1 Gene: ssb Feature: domain Description: PRK06752 Location: 1580321-1580648 bp Feature: domain Description: PRK06752 Location: 158032 1-1580648 bp Feature: gene Location: 1580812-1581066 bp Ori: AJH60551.1 Feature: domain Description: DUF4318 Location: 1580857-1581064 bp Feature: domain Description: DUF4318 Location: 1580857-1581064 bp Feature: gene Location: 1641496-1641921 bp Ori: AJH61882.1 Gene: ytfJ Feature: domain Description: spore_ytfJ Location: 1641502-1641871 bp Feature: domain Description: spore_ytfJ Location: 1641502 -1641871 bp Feature: gene Location: 1642889-1643212 bp Feature: gene Location: 1643846-1645492 bp Ori: AJH65487.1 Gene: ltrA Feature: domain Description: RVT_N Location: 1643888-1644125 bp Feature: domain Description: RVT_N Location: 1643888-164412 5 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1644179-1644839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1644179-1644839 bp Feature: domain Description: GIIM Note: maturase Location: 1644908-1645139 bp Feature: domain Description: GIIM Note: maturase Location: 1644908-1645139 bp Feature: gene Location: 1645821-1646039 bp Feature: gene Location: 1646317-1646508 bp Feature: gene Location: 5095026-5095931 bp Ori: AJH64132.1 Gene: ctaG Feature: domain Description: caa3_CtaG Location: 5095035-5095875 bp Feature: domain Description: caa3_CtaG Location: 5095035-5095875 bp Feature: gene Location: 5096158-5096547 bp Ori: AJH62544.1 Feature: domain Description: amiF Location: 5096161-5096533 bp Feature: domain Description: amiF Location: 5096161-5096533 bp Feature: gene Location: 5097263-5099095 bp Ori: AJH64055.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5097563-5098268 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5097563-50982 68 bp Feature: domain Description: HNHc Note: nucleases Location: 5098847-5098979 bp Feature: domain Description: HNHc Note: nucleases Location: 5098847-5098979 bp Feature: gene Location: 5099212-5099835 bp Ori: AJH64739.1 Feature: domain Description: amiF Location: 5099215-5099830 bp Feature: domain Description: amiF Location: 50992 15-5099830 bp Feature: gene Location: 5099882-5100247 bp Ori: AJH60696.1 Feature: domain Description: YugN Location: 5099903-5100149 bp Feature: domain Description: YugN Location: 5099903-5100149 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12420 (histidyl-tRNA synthetase; Provisional), YbaK_EbsC (TIGR00011), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), MTH1, Hit (COG0537), DUF2085 (pfam09858), PRK12451 (arginyl-tRNA synthetase; Reviewed), Intron_maturas2 (pfam01348)
HNHc (smart00507), SAM_MT (pfam04445), YphP_YqiW (TIGR04191), DUF393 (pfam04134), Nfu_N (smart00932), Virulence_fact (pfam13769), HEAT (sd00044), PRK06752 (single-stranded DNA-binding protein; Validated), DUF4318 (pfam14201), spore_ytfJ (TIGR02874)
caa3_CtaG (TIGR02737), amiF (PRK13287), YugN (pfam08868)