myRT

myRT report for GCA_000832885.1_ASM83288v1

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Seq: CP009649.1 Bacillus pseudomycoides strain BTZ plasmid pBTZ_2, complete sequence (140953 bp)
Overview 1 RT 1: 98088-104253 bp Neighborhood of RT #1 [98088, 104258] Peptidase_M56 RVT_N RVT-GII GIIM XRE Feature: gene Location: 98088-99965 bp Ori: AJI14510.1 Feature: domain Description: Peptidase_M56 Location: 98139-99096 bp Feature: domain Description: Peptidase_M56 Location: 981 39-99096 bp Feature: gene Location: 100188-100817 bp Feature: gene Location: 101551-103200 bp Ori: AJI14492.1 Gene: ltrA Feature: domain Description: RVT_N Location: 101599-101845 bp Feature: domain Description: RVT_N Location: 1 01 599-1 01 845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101899-102559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 899-1 02559 bp Feature: domain Description: GIIM Note: maturase Location: 102625-102859 bp Feature: domain Description: GIIM Note: maturase Location: 1 02625-1 02859 bp Feature: gene Location: 103609-104064 bp Feature: gene Location: 104064-104258 bp Ori: AJI14486.1 Feature: domain Description: XRE Location: 104073-104253 bp Feature: domain Description: XRE Location: 1 04073-1 04253 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_M56 (pfam05569), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), XRE (COG1476)

Seq: CP009650.1 Bacillus pseudomycoides strain BTZ plasmid pBTZ_1, complete sequence (273588 bp)
Overview 1 RT 1: 229423-233874 bp Neighborhood of RT #1 [229423, 233874] Lysozyme_like RVT-GII HNHc NLPC_P60 Feature: gene Location: 229423-229926 bp Ori: AJI14742.1 Feature: domain Description: Lysozyme_like Location: 229612-229909 bp Feature: domain Description: Lysozyme_like Location: 2 2 9612 -2 2 9909 bp Feature: gene Location: 230697-232478 bp Ori: AJI14667.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 230955-231660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 30955-2 31660 bp Feature: domain Description: HNHc Note: nucleases Location: 232224-232356 bp Feature: domain Description: HNHc Note: nucleases Location: 2 32 2 2 4-2 32 356 bp Feature: gene Location: 232977-233225 bp Ori: AJI14830.1 Feature: domain Description: NLPC_P60 Location: 233022-233214 bp Feature: domain Description: NLPC_P60 Location: 2 3302 2 -2 332 14 bp Feature: gene Location: 233275-233874 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Lysozyme_like (pfam13702), RVT-GII, HNHc (smart00507), NLPC_P60 (pfam00877)