myRT

myRT report for GCA_000832985.1_ASM83298v1

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Seq: CP009920.1 Bacillus megaterium NBRC 15308 = ATCC 14581, complete genome (5343114 bp)
Overview 1 RT 1: 3758641-3766894 bp Neighborhood of RT #1 [3758641, 3767130] GAT1_cyanophycinase GAT1_cyanophycinase RocR RVT-GII Intron_maturas2 HNHc RocR GAT1_cyanophycinase Feature: gene Location: 3758641-3761193 bp Ori: AJI20609.1 Feature: domain Description: GAT1_cyanophycinase Location: 3758752-3759529 bp Feature: domain Description: GAT1 _cyanophycinase Location: 3758752-3759529 bp Feature: domain Description: GAT1_cyanophycinase Location: 3760033-3760783 bp Feature: domain Description: GAT1 _cyanophycinase Location: 3760033-3760783 bp Feature: gene Location: 3761406-3762779 bp Ori: AJI20608.1 Feature: domain Description: RocR Location: 3761997-3762720 bp Feature: domain Description: RocR Location: 3761 997-3762720 bp Feature: gene Location: 3763329-3765143 bp Ori: AJI20791.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3763593-3764421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3763593-3764421 bp Feature: domain Description: Intron_maturas2 Location: 3764499-3764793 bp Feature: domain Description: Intron_maturas2 Location: 3764499-3764793 bp Feature: domain Description: HNHc Note: nucleases Location: 3764940-3765114 bp Feature: domain Description: HNHc Note: nucleases Location: 3764940-37651 1 4 bp Feature: gene Location: 3765284-3765979 bp Ori: AJI21048.1 Feature: domain Description: RocR Location: 3765287-3765794 bp Feature: domain Description: RocR Location: 3765287-3765794 bp Feature: gene Location: 3766054-3767130 bp Ori: AJI21003.1 Feature: domain Description: GAT1_cyanophycinase Location: 3766225-3766894 bp Feature: domain Description: GAT1 _cyanophycinase Location: 3766225-3766894 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GAT1_cyanophycinase (cd03145), RocR (COG3829), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: CP009921.1 Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid pBMV_2, complete sequence (301264 bp)
Overview 1 RT 1: 63837-68544 bp 2 RT 2: 129117-134991 bp Neighborhood of RT #1 [63837, 68741] HU RVT_N RVT-GII GIIM PadR DUF2812 Neighborhood of RT #2 [129117, 134991] TraG_VirD4 TraG_VirD4 RVT-GII Intron_maturas2 HNHc TraG-D_C Feature: gene Location: 63837-64109 bp Ori: AJI25571.1 Gene: hup Feature: domain Description: HU Location: 63843-64098 bp Feature: domain Description: HU Location: 63843-64098 bp Feature: gene Location: 64531-64749 bp Feature: gene Location: 65457-67106 bp Ori: AJI25790.1 Gene: ltrA Feature: domain Description: RVT_N Location: 65505-65751 bp Feature: domain Description: RVT_N Location: 65505-65751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65805-66465 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65805-66465 bp Feature: domain Description: GIIM Note: maturase Location: 66534-66765 bp Feature: domain Description: GIIM Note: maturase Location: 66534-66765 bp Feature: gene Location: 67865-68200 bp Ori: AJI25813.1 Feature: domain Description: PadR Location: 67916-68174 bp Feature: domain Description: PadR Location: 67916-68174 bp Feature: gene Location: 68202-68741 bp Ori: AJI25669.1 Feature: domain Description: DUF2812 Location: 68253-68544 bp Feature: domain Description: DUF2 812 Location: 682 53-68544 bp Feature: gene Location: 129117-129623 bp Feature: gene Location: 129613-131379 bp Ori: AJI25791.1 Feature: domain Description: TraG_VirD4 Location: 130168-130846 bp Feature: domain Description: TraG_VirD4 Location: 130168-130846 bp Feature: domain Description: TraG_VirD4 Location: 131158-131320 bp Feature: domain Description: TraG_VirD4 Location: 131158-13132 0 bp Feature: gene Location: 131929-133743 bp Ori: AJI25566.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132193-133021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132 193-13302 1 bp Feature: domain Description: Intron_maturas2 Location: 133099-133393 bp Feature: domain Description: Intron_maturas2 Location: 133099-133393 bp Feature: domain Description: HNHc Note: nucleases Location: 133540-133714 bp Feature: domain Description: HNHc Note: nucleases Location: 133540-133714 bp Feature: gene Location: 133851-134759 bp Ori: AJI25659.1 Feature: domain Description: TraG-D_C Location: 133860-134172 bp Feature: domain Description: TraG-D_C Location: 133860-134172 bp Feature: gene Location: 134785-134991 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HU (cd13831), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PadR (pfam03551), DUF2812 (pfam11193), TraG_VirD4, Intron_maturas2 (pfam01348), HNHc (smart00507), TraG-D_C (pfam12696)