myRT

myRT report for GCA_000833045.1_ASM83304v1

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Seq: CP009967.1 Bacillus cereus E33L plasmid pBCO_1, complete sequence (465970 bp)
Overview 1 RT 1: 120499-127614 bp 2 RT 2: 322204-327454 bp Neighborhood of RT #1 [120499, 127622] ANK ANK RVT_N RVT-GII GIIM HTH_28 HTH_28 PHA02517 Neighborhood of RT #2 [322204, 327454] DUF998 RVT-GII HNHc phage_phage_phage_TIGR01671 Feature: gene Location: 120499-121464 bp Feature: gene Location: 123103-123600 bp Ori: AJI26123.1 Feature: domain Description: ANK Location: 123130-123310 bp Feature: domain Description: ANK Location: 1 231 30-1 2331 0 bp Feature: domain Description: ANK Location: 123319-123583 bp Feature: domain Description: ANK Location: 1 2331 9-1 23583 bp Feature: gene Location: 124275-125936 bp Ori: AJI26238.1 Gene: ltrA Feature: domain Description: RVT_N Location: 124323-124569 bp Feature: domain Description: RVT_N Location: 1 24323-1 24569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124623-125283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 24623-1 25283 bp Feature: domain Description: GIIM Note: maturase Location: 125352-125583 bp Feature: domain Description: GIIM Note: maturase Location: 1 25352-1 25583 bp Feature: gene Location: 126316-126834 bp Ori: AJI26315.1 Feature: domain Description: HTH_28 Location: 126340-126481 bp Feature: domain Description: HTH_28 Location: 1 26340-1 26481 bp Feature: domain Description: HTH_28 Location: 126505-126661 bp Feature: domain Description: HTH_28 Location: 1 26505-1 26661 bp Feature: gene Location: 126861-127622 bp Ori: AJI26280.1 Feature: domain Description: PHA02517 Location: 126888-127614 bp Feature: domain Description: PHA0251 7 Location: 1 26888-1 2761 4 bp Feature: gene Location: 322204-322812 bp Ori: AJI26070.1 Feature: domain Description: DUF998 Location: 322273-322789 bp Feature: domain Description: DUF998 Location: 322273-322789 bp Feature: gene Location: 323185-323439 bp Feature: gene Location: 323904-325703 bp Ori: AJI25993.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 324201-324894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 324201 -324894 bp Feature: domain Description: HNHc Note: nucleases Location: 325452-325590 bp Feature: domain Description: HNHc Note: nucleases Location: 325452-325590 bp Feature: gene Location: 326801-327280 bp Ori: AJI26056.1 Feature: domain Description: phage_phage_phage_TIGR01671 Location: 326867-327065 bp Feature: domain Description: phage_phage_phage_TIGR01 671 Location: 326867-327065 bp Feature: gene Location: 327347-327454 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ANK (smart00248), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HTH_28 (pfam13518), PHA02517 (putative transposase OrfB; Reviewed), DUF998 (pfam06197), HNHc (smart00507), phage_phage_phage_TIGR01671