myRT

myRT report for GCA_000834195.1_ASM83419v1

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Seq: CP009367.1 Yersinia enterocolitica strain WA, complete genome (4548749 bp)
Overview 1 RT 1: 395015-400025 bp 2 RT 2: 693868-699277 bp Neighborhood of RT #1 [395015, 400042] PRK09678 RVT-Retrons PRK09692 AlpA Neighborhood of RT #2 [693868, 699330] Ogr_Delta SLATT_5 RVT-UG17 PRK09692 FocA Feature: gene Location: 395015-395260 bp Ori: AJI82244.1 Feature: domain Description: PRK09678 Location: 395018-395174 bp Feature: domain Description: PRK09678 Location: 39501 8-3951 74 bp Feature: gene Location: 395589-396341 bp Feature: gene Location: 396359-397582 bp Ori: AJI84599.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 396509-397127 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 396509-3971 27 bp Feature: gene Location: 397912-399108 bp Ori: AJI82389.1 Gene: intA Feature: domain Description: PRK09692 Location: 397915-399088 bp Feature: domain Description: PRK09692 Location: 39791 5-399088 bp Feature: gene Location: 399839-400042 bp Ori: AJI82048.1 Feature: domain Description: AlpA Location: 399848-400025 bp Feature: domain Description: AlpA Location: 399848-400025 bp Feature: gene Location: 693868-694215 bp Ori: AJI83297.1 Feature: domain Description: Ogr_Delta Location: 693892-694027 bp Feature: domain Description: Ogr_Delta Location: 693892-694027 bp Feature: gene Location: 694935-695519 bp Ori: AJI84541.1 Feature: domain Description: SLATT_5 Location: 694950-695481 bp Feature: domain Description: SLATT_5 Location: 694950-695481 bp Feature: gene Location: 695497-696831 bp Ori: AJI82161.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 695725-696328 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 695725-696328 bp Feature: gene Location: 696828-698009 bp Ori: AJI84957.1 Feature: domain Description: PRK09692 Location: 696837-697986 bp Feature: domain Description: PRK09692 Location: 696837-697986 bp Feature: gene Location: 698419-699330 bp Ori: AJI81240.1 Gene: yfdC Feature: domain Description: FocA Location: 698509-699277 bp Feature: domain Description: FocA Location: 698509-699277 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-Retrons, PRK09692 (Integrase; provisional), AlpA (COG3311), Ogr_Delta (pfam04606), SLATT_5 (pfam18160), RVT-UG17, FocA (COG2116)