myRT

myRT report for GCA_000835025.1_ASM83502v1

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Seq: CP009349.1 Bacillus thuringiensis HD1002 plasmid 1, complete sequence (359439 bp)
Overview 1 RT 1: 53803-57729 bp Neighborhood of RT #1 [53803, 57740] Spr RVT-GII Intron_maturas2 HNHc Lysozyme_like Feature: gene Location: 53803-54075 bp Feature: gene Location: 54096-54572 bp Ori: AJH03143.1 Feature: domain Description: Spr Location: 54174-54549 bp Feature: domain Description: Spr Location: 541 74-54549 bp Feature: gene Location: 54684-56507 bp Ori: AJH03346.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54948-55782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54948-55782 bp Feature: domain Description: Intron_maturas2 Location: 55854-56157 bp Feature: domain Description: Intron_maturas2 Location: 55854-561 57 bp Feature: domain Description: HNHc Note: nucleases Location: 56328-56481 bp Feature: domain Description: HNHc Note: nucleases Location: 56328-56481 bp Feature: gene Location: 56446-56661 bp Feature: gene Location: 57078-57740 bp Ori: AJH03349.1 Feature: domain Description: Lysozyme_like Location: 57267-57729 bp Feature: domain Description: Lysozyme_like Location: 57267-57729 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Spr (COG0791), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Lysozyme_like (pfam13702)

Seq: CP009347.1 Bacillus thuringiensis HD1002 plasmid 3, complete sequence (235425 bp)
Overview 1 RT 1: 49139-55737 bp Neighborhood of RT #1 [49139, 55775] ligA RVT-Retrons RVT-GII GIIM YpsA Macro_Poa1p_like Feature: gene Location: 49139-49378 bp Feature: gene Location: 49440-51410 bp Ori: AJH02424.1 Gene: ligA Feature: domain Description: ligA Location: 49455-51405 bp Feature: domain Description: ligA Location: 49455-51405 bp Feature: gene Location: 51799-52497 bp Ori: AJH02387.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 52006-52474 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 52 006-52 474 bp Feature: gene Location: 53020-54282 bp Ori: AJH02406.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53224-53881 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 532 2 4-53881 bp Feature: domain Description: GIIM Note: maturase Location: 53962-54190 bp Feature: domain Description: GIIM Note: maturase Location: 53962 -54190 bp Feature: gene Location: 54340-54729 bp Feature: gene Location: 54789-55775 bp Ori: AJH02489.1 Feature: domain Description: YpsA Location: 54810-55284 bp Feature: domain Description: YpsA Location: 54810-552 84 bp Feature: domain Description: Macro_Poa1p_like Location: 55302-55737 bp Feature: domain Description: Macro_Poa1p_like Location: 55302 -55737 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ligA (PRK14351), RVT-Retrons, RVT-GII, GIIM (pfam08388), YpsA, Macro_Poa1p_like