myRT

myRT report for GCA_000931565.1_ASM93156v1

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Seq: CP010882.1 Escherichia coli strain MNCRE44 plasmid pMNCRE44_6, complete sequence (122966 bp)
Overview 1 RT 1: 90921-94359 bp 2 RT 2: 105428-108103 bp Neighborhood of RT #1 [90921, 94359] COG3436 InsE RVT-GII GIIM Neighborhood of RT #2 [105428, 108111] InsE PHA02517 RVT-GII PRK10173 PRK10173 Feature: gene Location: 90921-91268 bp Ori: AJO87011.1 Feature: domain Description: COG3436 Location: 90927-91263 bp Feature: domain Description: COG3436 Location: 90927-91 263 bp Feature: gene Location: 91265-91669 bp Ori: AJO87012.1 Feature: domain Description: InsE Location: 91295-91631 bp Feature: domain Description: InsE Location: 91 295-91 631 bp Feature: gene Location: 92171-93679 bp Ori: AJO87013.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92429-93161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92429-931 61 bp Feature: domain Description: GIIM Note: maturase Location: 93236-93434 bp Feature: domain Description: GIIM Note: maturase Location: 93236-93434 bp Feature: gene Location: 93648-94073 bp Feature: gene Location: 93988-94359 bp Feature: gene Location: 105428-105754 bp Ori: AJO87027.1 Feature: domain Description: InsE Location: 105431-105752 bp Feature: domain Description: InsE Location: 1 05431 -1 05752 bp Feature: gene Location: 105754-106233 bp Ori: AJO87028.1 Feature: domain Description: PHA02517 Location: 105814-106168 bp Feature: domain Description: PHA0251 7 Location: 1 0581 4-1 061 68 bp Feature: gene Location: 106840-107328 bp Ori: AJO87029.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 107098-107170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 07098-1 071 70 bp Feature: gene Location: 107367-107687 bp Ori: AJO87030.1 Feature: domain Description: PRK10173 Location: 107370-107598 bp Feature: domain Description: PRK1 01 73 Location: 1 07370-1 07598 bp Feature: gene Location: 107662-108111 bp Ori: AJO87031.1 Feature: domain Description: PRK10173 Location: 107665-108103 bp Feature: domain Description: PRK1 01 73 Location: 1 07665-1 081 03 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3436 (Transposase ), InsE (COG2963), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)

Seq: CP010876.1 Escherichia coli strain MNCRE44, complete genome (5010884 bp)
Overview 1 RT 1: 1342762-1349616 bp Neighborhood of RT #1 [1342762, 1349616] PRK11388 RVT-Retrons Feature: gene Location: 1342762-1344681 bp Ori: AJO83179.1 Feature: domain Description: PRK11388 Location: 1342765-1344673 bp Feature: domain Description: PRK11388 Location: 1342 765-1344673 bp Feature: gene Location: 1344718-1344948 bp Feature: gene Location: 1345973-1347730 bp Ori: AJO83181.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1346117-1346735 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1346117-1346735 bp Feature: gene Location: 1347977-1349104 bp Feature: gene Location: 1349110-1349616 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11388 (DNA-binding transcriptional regulator DhaR; Provisional), RVT-Retrons