myRT

myRT report for GCA_000940995.1_ASM94099v1

Download annotations/find similar RTs

Seq: CP005974.1 Photobacterium gaetbulicola Gung47 chromosome 2, complete sequence (3856884 bp)
Overview 1 RT 1: 43206-48935 bp 2 RT 2: 79421-86768 bp 3 RT 3: 363320-368975 bp 4 RT 4: 706047-712329 bp 5 RT 5: 821332-826808 bp 6 RT 6: 871200-881460 bp 7 RT 7: 1105287-1110422 bp 8 RT 8: 1178743-1186317 bp 9 RT 9: 1299762-1308613 bp 10 RT 10: 1454923-1461822 bp 11 RT 11: 2010082-2019782 bp 12 RT 12: 2127438-2135140 bp 13 RT 13: 2618732-2626563 bp 14 RT 14: 3333709-3338040 bp 15 RT 15: 3535243-3540239 bp 16 RT 16: 3709175-3714509 bp Neighborhood of RT #1 [43206, 48949] PRK13289 SLR RVT-GII GIIM PRK01117 yjeT Neighborhood of RT #2 [79421, 86770] PRK10446 SapB RVT_N RVT-GII YkfC HNHc groEL groES Neighborhood of RT #3 [363320, 368992] RVT-GII RVT-GII GIIM ClC_sycA_like PRK09284 Neighborhood of RT #4 [706047, 712334] IbaG MurA RVT-GII RVT-GII GIIM protease_degS PRK10942 Neighborhood of RT #5 [821332, 826840] FruBisAldo_II_A PRK10334 RVT-GII RVT-GII GIIM YbaK_like PBP2_IciA_ArgP Neighborhood of RT #6 [871200, 881480] mutS1 Arm-DNA-bind_3 INT_P4_C RVT-UG3 RVT-UG8 PRK03661 Neighborhood of RT #7 [1105287, 1110427] PRK09453 PRK10805 RVT-GII group_II_RT_mat PRK12489 Neighborhood of RT #8 [1178743, 1186322] PRK07205 YfcC RVT-GII RVT-GII GIIM PBP2_TmCBP_oligosaccharides_like HisP Neighborhood of RT #9 [1299762, 1308657] pgm DUF1853 RVT-GII GIIM PRK10799 P-type_ATPase_cation Neighborhood of RT #10 [1454923, 1461824] PRK10543 PRK10824 RVT-GII GIIM lipase_Pla1_cef Toluene_X Neighborhood of RT #11 [2010082, 2019823] PRK12756 PEP_synth RVT-GII GIIM WecH TOMM_kin_cyc Neighborhood of RT #12 [2127438, 2135140] Peptidases_S8_Subtilisin_like_2 RVT-GII GIIM DUF262 Neighborhood of RT #13 [2618732, 2626796] YdcH MFS_OFA_like RVT-GII GIIM MauG MauG MauG Pox_A_type_inc PBP2_BztA Neighborhood of RT #14 [3333709, 3338048] DUF2956 COG4446 RVT-GII GIIM napC_nirT NapB Neighborhood of RT #15 [3535243, 3540262] DUF2787 DUF2787 RVT-GII GIIM INT_C_like_3 Inovirus_Gp2 Neighborhood of RT #16 [3709175, 3714733] COG3459 PGM_like2 RVT-GII GIIM Feature: gene Location: 43206-44390 bp Ori: AJR06814.1 Feature: domain Description: PRK13289 Location: 43209-44385 bp Feature: domain Description: PRK1 3289 Location: 43209-44385 bp Feature: gene Location: 44483-45112 bp Ori: AJR06815.1 Feature: domain Description: SLR Location: 44675-45014 bp Feature: domain Description: SLR Location: 44675-4501 4 bp Feature: gene Location: 45420-46673 bp Ori: AJR06816.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45636-46251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45636-46251 bp Feature: domain Description: GIIM Note: maturase Location: 46302-46506 bp Feature: domain Description: GIIM Note: maturase Location: 46302-46506 bp Feature: gene Location: 47316-48632 bp Ori: AJR06817.1 Feature: domain Description: PRK01117 Location: 47325-48624 bp Feature: domain Description: PRK01 1 1 7 Location: 47325-48624 bp Feature: gene Location: 48755-48949 bp Ori: AJR06818.1 Feature: domain Description: yjeT Location: 48758-48935 bp Feature: domain Description: yjeT Location: 48758-48935 bp Feature: gene Location: 79421-80335 bp Ori: AJR06845.1 Feature: domain Description: PRK10446 Location: 79436-80312 bp Feature: domain Description: PRK1 0446 Location: 79436-8031 2 bp Feature: gene Location: 80437-81066 bp Ori: AJR06846.1 Feature: domain Description: SapB Location: 80476-80959 bp Feature: domain Description: SapB Location: 80476-80959 bp Feature: gene Location: 82120-83778 bp Ori: AJR06847.1 Feature: domain Description: RVT_N Location: 82171-82414 bp Feature: domain Description: RVT_N Location: 821 71 -8241 4 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82459-83104 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82459-831 04 bp Feature: domain Description: YkfC Location: 83239-83410 bp Feature: domain Description: YkfC Location: 83239-8341 0 bp Feature: domain Description: HNHc Note: nucleases Location: 83608-83767 bp Feature: domain Description: HNHc Note: nucleases Location: 83608-83767 bp Feature: gene Location: 84792-86438 bp Ori: AJR06848.1 Feature: domain Description: groEL Location: 84798-86418 bp Feature: domain Description: groEL Location: 84798-8641 8 bp Feature: gene Location: 86480-86770 bp Ori: AJR06849.1 Feature: domain Description: groES Location: 86483-86768 bp Feature: domain Description: groES Location: 86483-86768 bp Feature: gene Location: 363320-363736 bp Ori: AJR07083.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 363536-363722 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 363536-363722 bp Feature: gene Location: 363769-364629 bp Ori: AJR07084.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 363772-364150 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 363772-3641 50 bp Feature: domain Description: GIIM Note: maturase Location: 364201-364405 bp Feature: domain Description: GIIM Note: maturase Location: 364201 -364405 bp Feature: gene Location: 365379-366746 bp Ori: AJR07085.1 Feature: domain Description: ClC_sycA_like Location: 365445-366621 bp Feature: domain Description: ClC_sycA_like Location: 365445-366621 bp Feature: gene Location: 367070-368992 bp Ori: AJR07086.1 Feature: domain Description: PRK09284 Location: 367094-368975 bp Feature: domain Description: PRK09284 Location: 367094-368975 bp Feature: gene Location: 706047-706304 bp Ori: AJR07406.1 Feature: domain Description: IbaG Location: 706056-706287 bp Feature: domain Description: IbaG Location: 706056-706287 bp Feature: gene Location: 706315-707571 bp Ori: AJR07407.1 Feature: domain Description: MurA Location: 706318-707566 bp Feature: domain Description: MurA Location: 70631 8-707566 bp Feature: gene Location: 708215-708631 bp Ori: AJR07408.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 708431-708620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 708431 -708620 bp Feature: gene Location: 708664-709524 bp Ori: AJR07409.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 708667-709045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 708667-709045 bp Feature: domain Description: GIIM Note: maturase Location: 709096-709300 bp Feature: domain Description: GIIM Note: maturase Location: 709096-709300 bp Feature: gene Location: 709710-710777 bp Ori: AJR07410.1 Feature: domain Description: protease_degS Location: 709716-710766 bp Feature: domain Description: protease_degS Location: 70971 6-71 0766 bp Feature: gene Location: 710967-712334 bp Ori: AJR07411.1 Feature: domain Description: PRK10942 Location: 710973-712329 bp Feature: domain Description: PRK1 0942 Location: 71 0973-71 2329 bp Feature: gene Location: 821332-822408 bp Ori: AJR07508.1 Feature: domain Description: FruBisAldo_II_A Location: 821344-822403 bp Feature: domain Description: FruBisAldo_II_A Location: 821 344-822403 bp Feature: gene Location: 822676-823599 bp Ori: AJR07509.1 Feature: domain Description: PRK10334 Location: 822763-823591 bp Feature: domain Description: PRK1 0334 Location: 822763-823591 bp Feature: gene Location: 824190-824606 bp Ori: AJR07510.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 824406-824592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 824406-824592 bp Feature: gene Location: 824639-825499 bp Ori: AJR07511.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 824642-825020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 824642-825020 bp Feature: domain Description: GIIM Note: maturase Location: 825071-825275 bp Feature: domain Description: GIIM Note: maturase Location: 825071 -825275 bp Feature: gene Location: 825538-826053 bp Ori: AJR07512.1 Feature: domain Description: YbaK_like Location: 825673-825997 bp Feature: domain Description: YbaK_like Location: 825673-825997 bp Feature: gene Location: 826319-826840 bp Ori: AJR07513.1 Feature: domain Description: PBP2_IciA_ArgP Location: 826325-826808 bp Feature: domain Description: PBP2_IciA_ArgP Location: 826325-826808 bp Feature: gene Location: 871200-873773 bp Ori: AJR07557.1 Feature: domain Description: mutS1 Location: 871230-873762 bp Feature: domain Description: mutS1 Location: 871 230-873762 bp Feature: gene Location: 873980-875260 bp Ori: AJR07558.1 Feature: domain Description: Arm-DNA-bind_3 Location: 874010-874256 bp Feature: domain Description: Arm-DNA-bind_3 Location: 87401 0-874256 bp Feature: domain Description: INT_P4_C Location: 874706-875237 bp Feature: domain Description: INT_P4_C Location: 874706-875237 bp Feature: gene Location: 875332-876615 bp Ori: AJR07559.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 875644-876130 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 875644-8761 30 bp Feature: gene Location: 876617-878563 bp Ori: AJR07560.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 877094-877535 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 877094-877535 bp Feature: gene Location: 879723-880514 bp Feature: gene Location: 881001-881480 bp Ori: AJR07562.1 Feature: domain Description: PRK03661 Location: 881004-881460 bp Feature: domain Description: PRK03661 Location: 881 004-881 460 bp Feature: gene Location: 1105287-1105835 bp Ori: AJR07753.1 Feature: domain Description: PRK09453 Location: 1105290-1105821 bp Feature: domain Description: PRK09453 Location: 1 1 05290-1 1 05821 bp Feature: gene Location: 1106180-1107025 bp Ori: AJR07754.1 Feature: domain Description: PRK10805 Location: 1106192-1107020 bp Feature: domain Description: PRK1 0805 Location: 1 1 061 92-1 1 07020 bp Feature: gene Location: 1107749-1108489 bp Ori: AJR07755.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1107965-1108481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 07965-1 1 08481 bp Feature: gene Location: 1108498-1109058 bp Ori: AJR07756.1 Feature: domain Description: group_II_RT_mat Note: maturase Location: 1108507-1108816 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 1 08507-1 1 0881 6 bp Feature: gene Location: 1109105-1110427 bp Ori: AJR07757.1 Feature: domain Description: PRK12489 Location: 1109108-1110422 bp Feature: domain Description: PRK1 2489 Location: 1 1 091 08-1 1 1 0422 bp Feature: gene Location: 1178743-1180098 bp Ori: AJR07822.1 Feature: domain Description: PRK07205 Location: 1178746-1180084 bp Feature: domain Description: PRK07205 Location: 1 1 78746-1 1 80084 bp Feature: gene Location: 1180095-1181576 bp Ori: AJR07823.1 Feature: domain Description: YfcC Location: 1180122-1181568 bp Feature: domain Description: YfcC Location: 1 1 801 22-1 1 81 568 bp Feature: gene Location: 1182177-1182686 bp Ori: AJR07824.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1182393-1182663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 82393-1 1 82663 bp Feature: gene Location: 1182719-1183486 bp Ori: AJR07825.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1182725-1183007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 82725-1 1 83007 bp Feature: domain Description: GIIM Note: maturase Location: 1183058-1183262 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 83058-1 1 83262 bp Feature: gene Location: 1183535-1185265 bp Ori: AJR07826.1 Feature: domain Description: PBP2_TmCBP_oligosaccharides_like Location: 1183676-1185173 bp Feature: domain Description: PBP2_TmCBP_oligosaccharides_like Location: 1 1 83676-1 1 851 73 bp Feature: gene Location: 1185552-1186322 bp Ori: AJR07827.1 Feature: domain Description: HisP Location: 1185561-1186317 bp Feature: domain Description: HisP Location: 1 1 85561 -1 1 8631 7 bp Feature: gene Location: 1299762-1301408 bp Ori: AJR07926.1 Feature: domain Description: pgm Location: 1299768-1301391 bp Feature: domain Description: pgm Location: 1 299768-1 301 391 bp Feature: gene Location: 1301459-1302265 bp Ori: AJR07927.1 Feature: domain Description: DUF1853 Location: 1301573-1302158 bp Feature: domain Description: DUF1 853 Location: 1 301 573-1 3021 58 bp Feature: gene Location: 1303214-1304530 bp Ori: AJR07928.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1303430-1304051 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 303430-1 304051 bp Feature: domain Description: GIIM Note: maturase Location: 1304102-1304306 bp Feature: domain Description: GIIM Note: maturase Location: 1 3041 02-1 304306 bp Feature: gene Location: 1304697-1305455 bp Ori: AJR07929.1 Feature: domain Description: PRK10799 Location: 1304700-1305453 bp Feature: domain Description: PRK1 0799 Location: 1 304700-1 305453 bp Feature: gene Location: 1305904-1308657 bp Ori: AJR07930.1 Feature: domain Description: P-type_ATPase_cation Location: 1305976-1308613 bp Feature: domain Description: P-type_ATPase_cation Location: 1 305976-1 30861 3 bp Feature: gene Location: 1454923-1455507 bp Ori: AJR08054.1 Feature: domain Description: PRK10543 Location: 1454926-1455505 bp Feature: domain Description: PRK1 0543 Location: 1 454926-1 455505 bp Feature: gene Location: 1455807-1456145 bp Ori: AJR08055.1 Feature: domain Description: PRK10824 Location: 1455813-1456134 bp Feature: domain Description: PRK1 0824 Location: 1 45581 3-1 4561 34 bp Feature: gene Location: 1456786-1458096 bp Ori: AJR08056.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1457002-1457617 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 457002-1 45761 7 bp Feature: domain Description: GIIM Note: maturase Location: 1457668-1457872 bp Feature: domain Description: GIIM Note: maturase Location: 1 457668-1 457872 bp Feature: gene Location: 1458146-1460560 bp Ori: AJR08057.1 Feature: domain Description: lipase_Pla1_cef Location: 1458149-1460510 bp Feature: domain Description: lipase_Pla1 _cef Location: 1 4581 49-1 46051 0 bp Feature: gene Location: 1460601-1461824 bp Ori: AJR08058.1 Feature: domain Description: Toluene_X Location: 1460646-1461822 bp Feature: domain Description: Toluene_X Location: 1 460646-1 461 822 bp Feature: gene Location: 2010082-2011137 bp Ori: AJR08503.1 Feature: domain Description: PRK12756 Location: 2010091-2011132 bp Feature: domain Description: PRK1 2756 Location: 201 0091 -201 1 1 32 bp Feature: gene Location: 2011578-2012459 bp Ori: AJR08504.1 Feature: domain Description: PEP_synth Location: 2011659-2012448 bp Feature: domain Description: PEP_synth Location: 201 1 659-201 2448 bp Feature: gene Location: 2013072-2014382 bp Ori: AJR08505.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2013288-2013903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 201 3288-201 3903 bp Feature: domain Description: GIIM Note: maturase Location: 2013954-2014158 bp Feature: domain Description: GIIM Note: maturase Location: 201 3954-201 41 58 bp Feature: gene Location: 2014427-2015449 bp Ori: AJR08506.1 Feature: domain Description: WecH Location: 2014436-2015444 bp Feature: domain Description: WecH Location: 201 4436-201 5444 bp Feature: gene Location: 2015771-2019823 bp Ori: AJR08507.1 Feature: domain Description: TOMM_kin_cyc Location: 2015897-2019782 bp Feature: domain Description: TOMM_kin_cyc Location: 201 5897-201 9782 bp Feature: gene Location: 2127438-2128922 bp Ori: AJR08589.1 Feature: domain Description: Peptidases_S8_Subtilisin_like_2 Location: 2127447-2128197 bp Feature: domain Description: Peptidases_S8_Subtilisin_like_2 Location: 21 27447-21 281 97 bp Feature: gene Location: 2129307-2129519 bp Feature: gene Location: 2130989-2132299 bp Ori: AJR08591.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2131205-2131820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 31 205-21 31 820 bp Feature: domain Description: GIIM Note: maturase Location: 2131871-2132075 bp Feature: domain Description: GIIM Note: maturase Location: 21 31 871 -21 32075 bp Feature: gene Location: 2132343-2134091 bp Ori: AJR08592.1 Feature: domain Description: DUF262 Location: 2132388-2133123 bp Feature: domain Description: DUF262 Location: 21 32388-21 331 23 bp Feature: gene Location: 2134136-2135140 bp Feature: gene Location: 2618732-2618968 bp Ori: AJR09018.1 Feature: domain Description: YdcH Location: 2618759-2618963 bp Feature: domain Description: YdcH Location: 261 8759-261 8963 bp Feature: gene Location: 2619300-2620523 bp Ori: AJR09019.1 Feature: domain Description: MFS_OFA_like Location: 2619324-2620473 bp Feature: domain Description: MFS_OFA_like Location: 261 9324-2620473 bp Feature: gene Location: 2620574-2621884 bp Ori: AJR09020.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2620790-2621405 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2620790-2621 405 bp Feature: domain Description: GIIM Note: maturase Location: 2621456-2621660 bp Feature: domain Description: GIIM Note: maturase Location: 2621 456-2621 660 bp Feature: gene Location: 2622870-2625275 bp Ori: AJR09021.1 Feature: domain Description: MauG Location: 2623035-2623152 bp Feature: domain Description: MauG Location: 2623035-26231 52 bp Feature: domain Description: MauG Location: 2623470-2624160 bp Feature: domain Description: MauG Location: 2623470-26241 60 bp Feature: domain Description: MauG Location: 2624478-2624745 bp Feature: domain Description: MauG Location: 2624478-2624745 bp Feature: gene Location: 2625570-2626796 bp Ori: AJR09022.1 Feature: domain Description: Pox_A_type_inc Location: 2625669-2625720 bp Feature: domain Description: Pox_A_type_inc Location: 2625669-2625720 bp Feature: domain Description: PBP2_BztA Location: 2625858-2626563 bp Feature: domain Description: PBP2_BztA Location: 2625858-2626563 bp Feature: gene Location: 3333709-3334116 bp Ori: AJR09611.1 Feature: domain Description: DUF2956 Location: 3333802-3334105 bp Feature: domain Description: DUF2956 Location: 3333802-33341 05 bp Feature: gene Location: 3334136-3334594 bp Ori: AJR09612.1 Feature: domain Description: COG4446 Location: 3334235-3334571 bp Feature: domain Description: COG4446 Location: 3334235-3334571 bp Feature: gene Location: 3334902-3336212 bp Ori: AJR09613.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3335118-3335733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33351 1 8-3335733 bp Feature: domain Description: GIIM Note: maturase Location: 3335784-3335988 bp Feature: domain Description: GIIM Note: maturase Location: 3335784-3335988 bp Feature: gene Location: 3336974-3337549 bp Ori: AJR09614.1 Feature: domain Description: napC_nirT Location: 3336986-3337529 bp Feature: domain Description: napC_nirT Location: 3336986-3337529 bp Feature: gene Location: 3337581-3338048 bp Ori: AJR09615.1 Feature: domain Description: NapB Location: 3337599-3338040 bp Feature: domain Description: NapB Location: 3337599-3338040 bp Feature: gene Location: 3535243-3535737 bp Ori: AJR09786.1 Feature: domain Description: DUF2787 Location: 3535282-3535651 bp Feature: domain Description: DUF2787 Location: 3535282-3535651 bp Feature: gene Location: 3535718-3536161 bp Ori: AJR09787.1 Feature: domain Description: DUF2787 Location: 3535784-3536153 bp Feature: domain Description: DUF2787 Location: 3535784-35361 53 bp Feature: gene Location: 3536200-3537510 bp Ori: AJR09788.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3536416-3537031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 353641 6-3537031 bp Feature: domain Description: GIIM Note: maturase Location: 3537082-3537286 bp Feature: domain Description: GIIM Note: maturase Location: 3537082-3537286 bp Feature: gene Location: 3538176-3538736 bp Ori: AJR09789.1 Feature: domain Description: INT_C_like_3 Location: 3538185-3538713 bp Feature: domain Description: INT_C_like_3 Location: 35381 85-353871 3 bp Feature: gene Location: 3539615-3540262 bp Ori: AJR09790.1 Feature: domain Description: Inovirus_Gp2 Location: 3539660-3540239 bp Feature: domain Description: Inovirus_Gp2 Location: 3539660-3540239 bp Feature: gene Location: 3709175-3711580 bp Ori: AJR09920.1 Feature: domain Description: COG3459 Location: 3709178-3711575 bp Feature: domain Description: COG3459 Location: 37091 78-371 1 575 bp Feature: gene Location: 3711638-3713050 bp Ori: AJR09921.1 Feature: domain Description: PGM_like2 Location: 3711644-3713039 bp Feature: domain Description: PGM_like2 Location: 371 1 644-371 3039 bp Feature: gene Location: 3713423-3714733 bp Ori: AJR09922.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3713639-3714254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 371 3639-371 4254 bp Feature: domain Description: GIIM Note: maturase Location: 3714305-3714509 bp Feature: domain Description: GIIM Note: maturase Location: 371 4305-371 4509 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13289 (NO-inducible flavohemoprotein), SLR (sd00010), RVT-GII, GIIM (pfam08388), PRK01117 (adenylosuccinate synthetase; Provisional), yjeT (COG3242), PRK10446 (30S ribosomal protein S6--L-glutamate ligase), SapB (smart00741), RVT_N (pfam13655), YkfC (COG3344)
HNHc (smart00507), groEL (PRK12852), groES (PRK14533), ClC_sycA_like (cd03682), PRK09284 (thiamine biosynthesis protein ThiC; Provisional), IbaG (COG5007), MurA (COG0766), protease_degS (TIGR02038), PRK10942 (serine endoprotease DegP), FruBisAldo_II_A (TIGR01520)
PRK10334 (small-conductance mechanosensitive channel MscS), YbaK_like (cl00022), PBP2_IciA_ArgP (cd08428), mutS1 (TIGR01070), Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801), RVT-UG3, RVT-UG8, PRK03661 (nicotinamide-nucleotide amidase), PRK09453 (phosphodiesterase; Provisional)
PRK10805 (formate transporter; Provisional), group_II_RT_mat (TIGR04416), PRK12489 (anaerobic C4-dicarboxylate transporter; Reviewed), PRK07205 (hypothetical protein; Provisional), YfcC (COG1288), PBP2_TmCBP_oligosaccharides_like (cd08509), HisP (COG4598), pgm (TIGR01132), DUF1853 (pfam08907), PRK10799 (type 2 GTP cyclohydrolase I)
P-type_ATPase_cation (cd07543), PRK10543 (superoxide dismutase ), PRK10824 (Grx4 family monothiol glutaredoxin), lipase_Pla1_cef (TIGR03502), Toluene_X (pfam03349), PRK12756 (Trp-sensitive 3-deoxy-7-phosphoheptulonate synthase AroH), PEP_synth (TIGR01418), WecH (COG3274), TOMM_kin_cyc (TIGR03903), Peptidases_S8_Subtilisin_like_2 (cd04847)
DUF262 (pfam03235), YdcH (COG2841), MFS_OFA_like (cd17353), MauG (COG1858), Pox_A_type_inc (pfam04508), PBP2_BztA (cd13692), DUF2956 (pfam11169), COG4446 (Uncharacterized conserved protein, DUF1499 family ), napC_nirT (TIGR02161), NapB (pfam03892)
DUF2787 (pfam10980), INT_C_like_3 (cd01192), Inovirus_Gp2 (pfam11726), COG3459 (Cellobiose phosphorylase ), PGM_like2 (cd05800)

Seq: CP005973.1 Photobacterium gaetbulicola Gung47 chromosome 1, complete sequence (2052529 bp)
Overview 1 RT 1: 145454-152803 bp 2 RT 2: 573255-576737 bp 3 RT 3: 951601-956255 bp 4 RT 4: 1319093-1323928 bp 5 RT 5: 1339590-1347292 bp 6 RT 6: 1515658-1521304 bp 7 RT 7: 1761036-1767027 bp Neighborhood of RT #1 [145454, 152823] RVT-GII GIIM AcrB RND_mfp Neighborhood of RT #2 [573255, 576763] DDE_Tnp_1 Tra5 RVT-GII DDE_Tnp_1 Dimer_Tnp_Tn5 Neighborhood of RT #3 [951601, 956257] acr3 HTH_ARSR RVT-GII GIIM DamX COG5413 Neighborhood of RT #4 [1319093, 1323933] Imm_superinfect SHOCT RVT_N RVT-GII GIIM COG3981 YigB Neighborhood of RT #5 [1339590, 1347510] PRK13503 BglX PLN03080 Fn3-like BglX RVT-GII GIIM EmrA Neighborhood of RT #6 [1515658, 1521354] CreA RVT-GII GIIM RVT-GII COG5514 ABC2_membrane_3 Neighborhood of RT #7 [1761036, 1767050] Fe-ADH-like RVT-GII GIIM Nudix_Hydrolase_30 KOG3641 M14_PaCCP-like Feature: gene Location: 145454-145900 bp Feature: gene Location: 146268-146564 bp Feature: gene Location: 147299-148609 bp Ori: AJR05172.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 147515-148130 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 147515-148130 bp Feature: domain Description: GIIM Note: maturase Location: 148181-148385 bp Feature: domain Description: GIIM Note: maturase Location: 148181-148385 bp Feature: gene Location: 148676-151732 bp Ori: AJR05173.1 Feature: domain Description: AcrB Location: 148685-151706 bp Feature: domain Description: AcrB Location: 148685-151706 bp Feature: gene Location: 151732-152823 bp Ori: AJR05174.1 Feature: domain Description: RND_mfp Location: 151903-152803 bp Feature: domain Description: RND_mfp Location: 151903-152 803 bp Feature: gene Location: 573255-573821 bp Ori: AJR05510.1 Feature: domain Description: DDE_Tnp_1 Location: 573354-573756 bp Feature: domain Description: DDE_Tnp_1 Location: 573354-573756 bp Feature: gene Location: 573878-574453 bp Ori: AJR05511.1 Feature: domain Description: Tra5 Location: 573884-574286 bp Feature: domain Description: Tra5 Location: 573884-5742 86 bp Feature: gene Location: 574933-575337 bp Ori: AJR05512.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 574987-575170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 574987-575170 bp Feature: gene Location: 575514-576563 bp Ori: AJR05513.1 Feature: domain Description: DDE_Tnp_1 Location: 575778-576453 bp Feature: domain Description: DDE_Tnp_1 Location: 575778-576453 bp Feature: gene Location: 576566-576763 bp Ori: AJR05514.1 Feature: domain Description: Dimer_Tnp_Tn5 Location: 576575-576737 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 576575-576737 bp Feature: gene Location: 951601-952632 bp Ori: AJR05828.1 Feature: domain Description: acr3 Location: 951604-952591 bp Feature: domain Description: acr3 Location: 951604-952 591 bp Feature: gene Location: 952713-953057 bp Ori: AJR05829.1 Feature: domain Description: HTH_ARSR Location: 952743-952944 bp Feature: domain Description: HTH_ARSR Location: 952 743-952 944 bp Feature: gene Location: 953169-954479 bp Ori: AJR05830.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 953385-954000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 953385-954000 bp Feature: domain Description: GIIM Note: maturase Location: 954051-954255 bp Feature: domain Description: GIIM Note: maturase Location: 954051-9542 55 bp Feature: gene Location: 955067-955594 bp Ori: AJR05831.1 Feature: domain Description: DamX Location: 955184-955565 bp Feature: domain Description: DamX Location: 955184-955565 bp Feature: gene Location: 955748-956257 bp Ori: AJR05832.1 Feature: domain Description: COG5413 Location: 955751-956255 bp Feature: domain Description: COG5413 Location: 955751-9562 55 bp Feature: gene Location: 1319093-1319284 bp Feature: gene Location: 1319287-1320237 bp Ori: AJR06184.1 Feature: domain Description: Imm_superinfect Location: 1319980-1320103 bp Feature: domain Description: Imm_superinfect Location: 1319980-132 0103 bp Feature: domain Description: SHOCT Location: 1320151-1320229 bp Feature: domain Description: SHOCT Location: 132 0151-132 02 2 9 bp Feature: gene Location: 1320451-1321923 bp Ori: AJR06185.1 Feature: domain Description: RVT_N Location: 1320499-1320742 bp Feature: domain Description: RVT_N Location: 132 0499-132 0742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1320787-1321414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132 0787-132 1414 bp Feature: domain Description: GIIM Note: maturase Location: 1321474-1321699 bp Feature: domain Description: GIIM Note: maturase Location: 132 1474-132 1699 bp Feature: gene Location: 1322929-1323450 bp Ori: AJR06186.1 Feature: domain Description: COG3981 Location: 1322932-1323439 bp Feature: domain Description: COG3981 Location: 132 2 932 -132 3439 bp Feature: gene Location: 1323466-1323933 bp Ori: AJR06187.1 Feature: domain Description: YigB Location: 1323544-1323928 bp Feature: domain Description: YigB Location: 132 3544-132 392 8 bp Feature: gene Location: 1339590-1340474 bp Ori: AJR06204.1 Feature: domain Description: PRK13503 Location: 1339674-1340454 bp Feature: domain Description: PRK13503 Location: 1339674-1340454 bp Feature: gene Location: 1340651-1343425 bp Ori: AJR06205.1 Feature: domain Description: BglX Location: 1340699-1340777 bp Feature: domain Description: BglX Location: 1340699-1340777 bp Feature: domain Description: PLN03080 Location: 1341056-1341533 bp Feature: domain Description: PLN03080 Location: 1341056-1341533 bp Feature: domain Description: Fn3-like Location: 1341620-1341845 bp Feature: domain Description: Fn3-like Location: 134162 0-1341845 bp Feature: domain Description: BglX Location: 1342253-1343048 bp Feature: domain Description: BglX Location: 1342 2 53-1343048 bp Feature: gene Location: 1343503-1344813 bp Ori: AJR06206.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1343719-1344334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1343719-1344334 bp Feature: domain Description: GIIM Note: maturase Location: 1344385-1344589 bp Feature: domain Description: GIIM Note: maturase Location: 1344385-1344589 bp Feature: gene Location: 1345424-1346035 bp Feature: gene Location: 1346371-1347510 bp Ori: AJR06208.1 Feature: domain Description: EmrA Location: 1346581-1347292 bp Feature: domain Description: EmrA Location: 1346581-13472 92 bp Feature: gene Location: 1515658-1516134 bp Ori: AJR06360.1 Feature: domain Description: CreA Location: 1515667-1516114 bp Feature: domain Description: CreA Location: 1515667-1516114 bp Feature: gene Location: 1516430-1517266 bp Feature: gene Location: 1517305-1518249 bp Ori: AJR06362.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1517329-1517770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 151732 9-1517770 bp Feature: domain Description: GIIM Note: maturase Location: 1517848-1518025 bp Feature: domain Description: GIIM Note: maturase Location: 1517848-151802 5 bp Feature: gene Location: 1518188-1518616 bp Ori: AJR06363.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1518404-1518590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1518404-1518590 bp Feature: gene Location: 1519459-1520091 bp Ori: AJR06364.1 Feature: domain Description: COG5514 Location: 1519462-1520086 bp Feature: domain Description: COG5514 Location: 1519462 -152 0086 bp Feature: gene Location: 1520188-1521354 bp Ori: AJR06365.1 Feature: domain Description: ABC2_membrane_3 Location: 1520248-1521304 bp Feature: domain Description: ABC2 _membrane_3 Location: 152 02 48-152 1304 bp Feature: gene Location: 1761036-1761398 bp Feature: gene Location: 1761520-1762695 bp Ori: AJR06563.1 Feature: domain Description: Fe-ADH-like Location: 1761580-1762675 bp Feature: domain Description: Fe-ADH-like Location: 1761580-1762 675 bp Feature: gene Location: 1762836-1764146 bp Ori: AJR06564.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1763052-1763667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1763052 -1763667 bp Feature: domain Description: GIIM Note: maturase Location: 1763718-1763922 bp Feature: domain Description: GIIM Note: maturase Location: 1763718-176392 2 bp Feature: gene Location: 1765309-1765752 bp Ori: AJR06565.1 Feature: domain Description: Nudix_Hydrolase_30 Location: 1765321-1765696 bp Feature: domain Description: Nudix_Hydrolase_30 Location: 176532 1-1765696 bp Feature: gene Location: 1765926-1767050 bp Ori: AJR06566.1 Feature: domain Description: KOG3641 Location: 1765932-1766109 bp Feature: domain Description: KOG3641 Location: 1765932 -1766109 bp Feature: domain Description: M14_PaCCP-like Location: 1766262-1767027 bp Feature: domain Description: M14_PaCCP-like Location: 17662 62 -176702 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), AcrB (COG0841), RND_mfp (TIGR01730), DDE_Tnp_1 (pfam01609), Tra5 (COG2801), Dimer_Tnp_Tn5 (pfam02281), acr3 (TIGR00832), HTH_ARSR (smart00418), DamX (COG3266)
COG5413 (Uncharacterized integral membrane protein ), Imm_superinfect (pfam14373), SHOCT (pfam09851), RVT_N (pfam13655), COG3981 (Predicted acetyltransferase ), YigB (COG1011), PRK13503 (HTH-type transcriptional activator RhaS), BglX (COG1472), PLN03080 (Probable beta-xylosidase; Provisional), Fn3-like (pfam14310)
EmrA (COG1566), CreA (pfam05981), COG5514 (Uncharacterized protein ), ABC2_membrane_3 (pfam12698), Fe-ADH-like (cd17814), Nudix_Hydrolase_30 (cd04689), KOG3641 (KOG3641, Zinc carboxypeptidase ), M14_PaCCP-like (cd06234)