myRT

myRT report for GCA_000943515.2_ASM94351v2

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Seq: CP016174.1 Amycolatopsis orientalis strain B-37, complete genome (9490992 bp)
Overview 1 RT 1: 8529322-8535038 bp 2 RT 2: 9097045-9100274 bp Neighborhood of RT #1 [8529322, 8535112] TNT Pentapeptide Pentapeptide Pentapeptide RVT-Retrons VOC_like Hr-like Neighborhood of RT #2 [9097045, 9100274] QueC RVT-G2Lb YfmG Feature: gene Location: 8529322-8532090 bp Ori: ANN20670.1 Feature: domain Description: TNT Location: 8531806-8532058 bp Feature: domain Description: TNT Location: 8531 806-8532058 bp Feature: gene Location: 8532197-8532820 bp Ori: ANN22291.1 Feature: domain Description: Pentapeptide Location: 8532251-8532338 bp Feature: domain Description: Pentapeptide Location: 8532251 -8532338 bp Feature: domain Description: Pentapeptide Location: 8532437-8532545 bp Feature: domain Description: Pentapeptide Location: 8532437-8532545 bp Feature: domain Description: Pentapeptide Location: 8532572-8532677 bp Feature: domain Description: Pentapeptide Location: 8532572-8532677 bp Feature: gene Location: 8532846-8533871 bp Ori: ANN20671.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8533005-8533641 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8533005-8533641 bp Feature: gene Location: 8534053-8534535 bp Ori: ANN20672.1 Feature: domain Description: VOC_like Location: 8534086-8534428 bp Feature: domain Description: VOC_like Location: 8534086-8534428 bp Feature: gene Location: 8534603-8535112 bp Ori: ANN20673.1 Feature: domain Description: Hr-like Location: 8534654-8535038 bp Feature: domain Description: Hr-like Location: 8534654-8535038 bp Feature: gene Location: 9097045-9097527 bp Feature: gene Location: 9097530-9098234 bp Ori: ANN22349.1 Feature: domain Description: QueC Location: 9097566-9098223 bp Feature: domain Description: QueC Location: 9097566-9098223 bp Feature: gene Location: 9098449-9099228 bp Ori: ANN21155.1 Feature: RT Description: RVT-G2Lb Note: G2Lb RT Location: 9098671-9099184 bp Feature: RT Description: RVT-G2Lb Note: G2Lb RT Location: 9098671 -90991 84 bp Feature: gene Location: 9099232-9099789 bp Ori: ANN21156.1 Feature: domain Description: YfmG Location: 9099376-9099784 bp Feature: domain Description: YfmG Location: 9099376-9099784 bp Feature: gene Location: 9099786-9100274 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TNT (pfam14021), Pentapeptide (pfam00805), RVT-Retrons, VOC_like (cd16355), Hr-like (cd12108), QueC (pfam06508), RVT-G2Lb, YfmG (COG1262)