myRT

myRT report for GCA_000953355.1_XNC2

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Seq: LN681227.1 Xenorhabdus nematophila AN6/1 genome assembly XNC2, chromosome : I (4432103 bp)
Overview 1 RT 1: 115442-117528 bp 2 RT 2: 258327-266451 bp 3 RT 3: 1735893-1742004 bp 4 RT 4: 1813595-1818165 bp 5 RT 5: 2571404-2574224 bp 6 RT 6: 4101426-4104220 bp 7 RT 7: 4218380-4222602 bp 8 RT 8: 4368101-4376092 bp Neighborhood of RT #1 [115442, 117528] RVT-GII RVT-GII Neighborhood of RT #2 [258327, 266456] EF-Tu RVT-GII RVT-GII Recombinase Zn_ribbon_recom RVT-CRISPR-like RVT-GII GIIM RVT-GII GIIM PRK10509 PRK10635 Neighborhood of RT #3 [1735893, 1742051] DDE_3 COG3547 RVT-GII RVT-GII GIIM RVT-GII GIIM COG3547 PRK11648 Neighborhood of RT #4 [1813595, 1818212] RVT-GII COG3547 Neighborhood of RT #5 [2571404, 2574224] COG3547 RVT-GII Neighborhood of RT #6 [4101426, 4104225] RVT-GII GIIM COG3547 Neighborhood of RT #7 [4218380, 4222664] COG3547 RVT-GII GIIM group_II_RT_mat RVT-GII COG3547 Neighborhood of RT #8 [4368101, 4376094] RVT-GII COG3547 efflux_Bcr_CflA RVT-GII GIIM MFS_MdtH_MDR_like PRK09730 Feature: gene Location: 115442-115657 bp Feature: gene Location: 115679-116155 bp Feature: gene Location: 115926-116348 bp Ori: CEK21127.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 116262-116325 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 6262-1 1 6325 bp Feature: gene Location: 116359-116853 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 116365-116851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 6365-1 1 6851 bp Feature: gene Location: 116943-117062 bp Feature: gene Location: 117274-117528 bp Feature: gene Location: 258327-259511 bp Ori: CEK21298.1 Gene: tufB Feature: domain Description: EF-Tu Location: 258330-259506 bp Feature: domain Description: EF-Tu Location: 258330-259506 bp Feature: gene Location: 260003-260410 bp Feature: gene Location: 260328-260441 bp Ori: CEK21300.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 260331-260439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 260331 -260439 bp Feature: gene Location: 260531-260704 bp Ori: CEK21301.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 260534-260669 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 260534-260669 bp Feature: gene Location: 260567-260992 bp Feature: gene Location: 260985-261818 bp Ori: CEK21303.1 Feature: domain Description: Recombinase Location: 261021-261387 bp Feature: domain Description: Recombinase Location: 261 021 -261 387 bp Feature: domain Description: Zn_ribbon_recom Location: 261432-261615 bp Feature: domain Description: Zn_ribbon_recom Location: 261 432-261 61 5 bp Feature: gene Location: 262196-262510 bp Feature: gene Location: 262461-262748 bp Feature: gene Location: 262923-263021 bp Ori: CEK21308.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 262929-262995 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 262929-262995 bp Feature: gene Location: 263028-263159 bp Feature: gene Location: 263399-264292 bp Ori: CEK21310.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 263753-264278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 263753-264278 bp Feature: gene Location: 264479-264817 bp Ori: CEK21311.1 Feature: domain Description: GIIM Note: maturase Location: 264500-264719 bp Feature: domain Description: GIIM Note: maturase Location: 264500-26471 9 bp Feature: gene Location: 264814-265506 bp Ori: CEK21312.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 264889-265027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 264889-265027 bp Feature: domain Description: GIIM Note: maturase Location: 265075-265300 bp Feature: domain Description: GIIM Note: maturase Location: 265075-265300 bp Feature: gene Location: 265710-265904 bp Ori: CEK21313.1 Gene: bfd Feature: domain Description: PRK10509 Location: 265713-265902 bp Feature: domain Description: PRK1 0509 Location: 26571 3-265902 bp Feature: gene Location: 265980-266456 bp Ori: CEK21314.1 Gene: bfr Feature: domain Description: PRK10635 Location: 265983-266451 bp Feature: domain Description: PRK1 0635 Location: 265983-266451 bp Feature: gene Location: 1735893-1736090 bp Ori: CEK22745.1 Feature: domain Description: DDE_3 Location: 1735926-1736046 bp Feature: domain Description: DDE_3 Location: 1 735926-1 736046 bp Feature: gene Location: 1736427-1736876 bp Ori: CEK22746.1 Feature: domain Description: COG3547 Location: 1736469-1736814 bp Feature: domain Description: COG3547 Location: 1 736469-1 73681 4 bp Feature: gene Location: 1737357-1738073 bp Ori: CEK22747.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1737561-1738047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 737561 -1 738047 bp Feature: gene Location: 1738080-1738211 bp Feature: gene Location: 1738479-1739813 bp Ori: CEK22749.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1738833-1739490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 738833-1 739490 bp Feature: domain Description: GIIM Note: maturase Location: 1739571-1739790 bp Feature: domain Description: GIIM Note: maturase Location: 1 739571 -1 739790 bp Feature: gene Location: 1739844-1740518 bp Ori: CEK22750.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1739943-1740117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 739943-1 7401 1 7 bp Feature: domain Description: GIIM Note: maturase Location: 1740198-1740402 bp Feature: domain Description: GIIM Note: maturase Location: 1 7401 98-1 740402 bp Feature: gene Location: 1740629-1741174 bp Ori: CEK22751.1 Feature: domain Description: COG3547 Location: 1740665-1741142 bp Feature: domain Description: COG3547 Location: 1 740665-1 741 1 42 bp Feature: gene Location: 1741473-1742051 bp Ori: CEK22752.1 Gene: ydjM Feature: domain Description: PRK11648 Location: 1741476-1742004 bp Feature: domain Description: PRK1 1 648 Location: 1 741 476-1 742004 bp Feature: gene Location: 1813595-1813852 bp Feature: gene Location: 1813991-1814176 bp Feature: gene Location: 1815991-1816707 bp Ori: CEK22834.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1816156-1816702 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 81 61 56-1 81 6702 bp Feature: gene Location: 1816918-1817205 bp Feature: gene Location: 1817244-1818212 bp Ori: CEK22836.1 Feature: domain Description: COG3547 Location: 1817271-1818165 bp Feature: domain Description: COG3547 Location: 1 81 7271 -1 81 81 65 bp Feature: gene Location: 2571404-2572237 bp Ori: CEK23490.1 Feature: domain Description: COG3547 Location: 2571416-2572211 bp Feature: domain Description: COG3547 Location: 2571 41 6-257221 1 bp Feature: gene Location: 2572322-2572486 bp Feature: gene Location: 2572405-2573739 bp Ori: CEK23492.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2572690-2573377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2572690-2573377 bp Feature: gene Location: 2573750-2573992 bp Feature: gene Location: 2574066-2574224 bp Feature: gene Location: 4101426-4101584 bp Feature: gene Location: 4101768-4101899 bp Feature: gene Location: 4101859-4103244 bp Ori: CEK25099.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4102195-4102882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 021 95-41 02882 bp Feature: domain Description: GIIM Note: maturase Location: 4103011-4103155 bp Feature: domain Description: GIIM Note: maturase Location: 41 0301 1 -41 031 55 bp Feature: gene Location: 4103238-4103381 bp Feature: gene Location: 4103413-4104225 bp Ori: CEK25101.1 Feature: domain Description: COG3547 Location: 4103425-4104220 bp Feature: domain Description: COG3547 Location: 41 03425-41 04220 bp Feature: gene Location: 4218380-4219033 bp Feature: gene Location: 4219225-4219770 bp Ori: CEK25231.1 Feature: domain Description: COG3547 Location: 4219261-4219738 bp Feature: domain Description: COG3547 Location: 421 9261 -421 9738 bp Feature: gene Location: 4219881-4220525 bp Ori: CEK25232.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4219950-4220124 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 421 9950-42201 24 bp Feature: domain Description: GIIM Note: maturase Location: 4220205-4220409 bp Feature: domain Description: GIIM Note: maturase Location: 4220205-4220409 bp Feature: gene Location: 4220586-4221002 bp Ori: CEK25233.1 Feature: domain Description: group_II_RT_mat Note: maturase Location: 4220589-4220952 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4220589-4220952 bp Feature: gene Location: 4221037-4222122 bp Ori: CEK25234.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4221583-4222108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4221 583-42221 08 bp Feature: gene Location: 4222130-4222294 bp Feature: gene Location: 4222272-4222664 bp Ori: CEK25236.1 Feature: domain Description: COG3547 Location: 4222293-4222602 bp Feature: domain Description: COG3547 Location: 4222293-4222602 bp Feature: gene Location: 4368101-4368310 bp Feature: gene Location: 4368468-4368710 bp Feature: gene Location: 4368670-4369440 bp Ori: CEK25400.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4369006-4369435 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4369006-4369435 bp Feature: gene Location: 4370224-4371036 bp Ori: CEK25401.1 Feature: domain Description: COG3547 Location: 4370236-4371031 bp Feature: domain Description: COG3547 Location: 4370236-4371 031 bp Feature: gene Location: 4371041-4371208 bp Feature: gene Location: 4371402-4371527 bp Feature: gene Location: 4371471-4372664 bp Ori: CEK25404.1 Feature: domain Description: efflux_Bcr_CflA Location: 4371516-4372641 bp Feature: domain Description: efflux_Bcr_CflA Location: 4371 51 6-4372641 bp Feature: gene Location: 4373724-4374842 bp Ori: CEK25405.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4373928-4374585 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4373928-4374585 bp Feature: domain Description: GIIM Note: maturase Location: 4374666-4374834 bp Feature: domain Description: GIIM Note: maturase Location: 4374666-4374834 bp Feature: gene Location: 4374931-4375341 bp Ori: CEK25406.1 Feature: domain Description: MFS_MdtH_MDR_like Location: 4375054-4375306 bp Feature: domain Description: MFS_MdtH_MDR_like Location: 4375054-4375306 bp Feature: gene Location: 4375345-4376094 bp Ori: CEK25407.1 Gene: ygfF Feature: domain Description: PRK09730 Location: 4375357-4376092 bp Feature: domain Description: PRK09730 Location: 4375357-4376092 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, EF-Tu (TIGR00485), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-CRISPR, GIIM (pfam08388), PRK10509 (bacterioferritin-associated ferredoxin; Provisional), PRK10635 (bacterioferritin; Provisional), DDE_3 (pfam13358), COG3547 (Transposase )
PRK11648 (metal-dependent hydrolase), group_II_RT_mat (TIGR04416), efflux_Bcr_CflA (TIGR00710), MFS_MdtH_MDR_like (cd17329), PRK09730 (SDR family oxidoreductase)