myRT

myRT report for GCA_000953455.1_Ppseudo_Pac

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Seq: LK391695.1 Pseudomonas pseudoalcaligenes genome assembly Ppseudo_Pac, chromosome : I (4696984 bp)
Overview 1 RT 1: 6875-15733 bp 2 RT 2: 79575-84929 bp 3 RT 3: 189311-193833 bp 4 RT 4: 610283-615015 bp 5 RT 5: 1000678-1007247 bp 6 RT 6: 1042908-1051019 bp 7 RT 7: 1139874-1145380 bp 8 RT 8: 1452306-1461971 bp 9 RT 9: 1510689-1514768 bp 10 RT 10: 1604493-1611120 bp 11 RT 11: 1731138-1737774 bp 12 RT 12: 1769217-1771716 bp 13 RT 13: 2136715-2141949 bp 14 RT 14: 2717701-2724369 bp 15 RT 15: 2862267-2871632 bp 16 RT 16: 2933358-2937369 bp 17 RT 17: 3117501-3122423 bp 18 RT 18: 3392005-3395745 bp 19 RT 19: 3597147-3602894 bp 20 RT 20: 3954588-3958503 bp 21 RT 21: 4257643-4263972 bp 22 RT 22: 4357290-4364658 bp Neighborhood of RT #1 [6875, 15780] TnpB_IS66 RVT-GII GIIM TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII GIIM PRK11235 COG4951 SSL2 SSL2 Neighborhood of RT #2 [79575, 84943] aspA RVT-GII GIIM ARO8 PaiB Neighborhood of RT #3 [189311, 193847] KOG3267 RVT-GII GIIM PRK10748 XerC Neighborhood of RT #4 [610283, 615020] FNR_iron_sulfur_binding_2 fer2 DesA RVT-GII GIIM SH3_16 SH3_16 SH3_16 SH3_16 YfdV Neighborhood of RT #5 [1000678, 1007261] rpsO polynuc_phos RVT-GII GIIM LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C DUF2845 Neighborhood of RT #6 [1042908, 1051051] PRK06466 ilvH RVT-GII GIIM RVT-GII GIIM PRK11716 PRK05479 Neighborhood of RT #7 [1139874, 1145412] guaA TnpB_IS66 RVT-GII GIIM TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C Neighborhood of RT #8 [1452306, 1461988] LrgB PRK05257 RVT-GII GIIM RVT-GII GIIM Trypsin_2 PRK04974 Neighborhood of RT #9 [1510689, 1514770] TnpB_IS66 RVT-GII GIIM TnpB_IS66 PreA DUF3470 Neighborhood of RT #10 [1604493, 1611125] PRK06635 PRK01712 RVT-GII GIIM DUF4124 SmpA_OmlA MgtE Neighborhood of RT #11 [1731138, 1737905] HNHc DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII IbpA ClpA Neighborhood of RT #12 [1769217, 1771868] TnpB_IS66 RVT-GII GIIM TnpB_IS66 LZ_Tnp_IS66 Neighborhood of RT #13 [2136715, 2141975] RVT-GII GIIM efp_adjacent_2 Neighborhood of RT #14 [2717701, 2724689] HNHc DDE_Tnp_1 RVT_N RVT-GII GIIM PRK15426 COG3179 Neighborhood of RT #15 [2862267, 2871634] YfbK BatD RVT-GII GIIM COG1033 COG4447 Neighborhood of RT #16 [2933358, 2937374] DDE_Tnp_IS66 DDE_Tnp_IS66_C TnpB_IS66 RVT-GII GIIM TnpB_IS66 PRK05657 Neighborhood of RT #17 [3117501, 3122443] PRK05451 RNaseT RVT-GII GIIM Bfd DUF5064 Neighborhood of RT #18 [3392005, 3395849] LZ_Tnp_IS66 TnpB_IS66 RVT-GII GIIM TnpB_IS66 InsA DDE_Tnp_IS1595 Neighborhood of RT #19 [3597147, 3602899] NlpD DciA RVT-GII GIIM LpxC PRK09330 Neighborhood of RT #20 [3954588, 3958517] RVT-GII GIIM IcmL Neighborhood of RT #21 [4257643, 4264064] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 TnpB_IS66 RVT-GII GIIM couple_hipB HipA_So_like Neighborhood of RT #22 [4357290, 4364663] PBP2_DppA_like PRK00024 RVT_N RVT-GII GIIM HNHc PRK05579 dut Feature: gene Location: 6875-7777 bp Feature: gene Location: 7839-8042 bp Ori: CDR89244.1 Feature: domain Description: TnpB_IS66 Location: 7869-8019 bp Feature: domain Description: TnpB_IS66 Location: 7869-801 9 bp Feature: gene Location: 8554-9822 bp Ori: CDR89245.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8758-9415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8758-941 5 bp Feature: domain Description: GIIM Note: maturase Location: 9493-9715 bp Feature: domain Description: GIIM Note: maturase Location: 9493-971 5 bp Feature: gene Location: 9856-10059 bp Ori: CDR89246.1 Feature: domain Description: TnpB_IS66 Location: 9880-10024 bp Feature: domain Description: TnpB_IS66 Location: 9880-1 0024 bp Feature: gene Location: 10079-11620 bp Ori: CDR89247.1 Feature: domain Description: LZ_Tnp_IS66 Location: 10163-10400 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 01 63-1 0400 bp Feature: domain Description: zf-IS66 Location: 10424-10553 bp Feature: domain Description: zf-IS66 Location: 1 0424-1 0553 bp Feature: domain Description: DDE_Tnp_IS66 Location: 10598-11453 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 0598-1 1 453 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 11474-11588 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 1 474-1 1 588 bp Feature: gene Location: 11584-12411 bp Ori: CDR89248.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11665-11962 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 665-1 1 962 bp Feature: domain Description: GIIM Note: maturase Location: 12016-12244 bp Feature: domain Description: GIIM Note: maturase Location: 1 201 6-1 2244 bp Feature: gene Location: 12827-13066 bp Ori: CDR89249.1 Feature: domain Description: PRK11235 Location: 12833-13064 bp Feature: domain Description: PRK1 1 235 Location: 1 2833-1 3064 bp Feature: gene Location: 13393-15780 bp Ori: CDR89250.1 Feature: domain Description: COG4951 Location: 13408-14542 bp Feature: domain Description: COG4951 Location: 1 3408-1 4542 bp Feature: domain Description: SSL2 Location: 14608-15172 bp Feature: domain Description: SSL2 Location: 1 4608-1 51 72 bp Feature: domain Description: SSL2 Location: 15328-15733 bp Feature: domain Description: SSL2 Location: 1 5328-1 5733 bp Feature: gene Location: 79575-80999 bp Ori: CDR89317.1 Gene: aspA Feature: domain Description: aspA Location: 79590-80982 bp Feature: domain Description: aspA Location: 79590-80982 bp Feature: gene Location: 81012-81140 bp Feature: gene Location: 81539-82615 bp Ori: CDR89319.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81572-82166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 572-821 66 bp Feature: domain Description: GIIM Note: maturase Location: 82220-82448 bp Feature: domain Description: GIIM Note: maturase Location: 82220-82448 bp Feature: gene Location: 82746-84212 bp Ori: CDR89320.1 Feature: domain Description: ARO8 Location: 82809-84207 bp Feature: domain Description: ARO8 Location: 82809-84207 bp Feature: gene Location: 84311-84943 bp Ori: CDR89321.1 Gene: paiB Feature: domain Description: PaiB Location: 84314-84929 bp Feature: domain Description: PaiB Location: 8431 4-84929 bp Feature: gene Location: 189311-189736 bp Ori: CDR89417.1 Feature: domain Description: KOG3267 Location: 189323-189725 bp Feature: domain Description: KOG3267 Location: 1 89323-1 89725 bp Feature: gene Location: 189813-190136 bp Feature: gene Location: 190713-192038 bp Ori: CDR89419.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 190974-191589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 90974-1 91 589 bp Feature: domain Description: GIIM Note: maturase Location: 191643-191871 bp Feature: domain Description: GIIM Note: maturase Location: 1 91 643-1 91 871 bp Feature: gene Location: 192241-192948 bp Ori: CDR89420.1 Feature: domain Description: PRK10748 Location: 192250-192922 bp Feature: domain Description: PRK1 0748 Location: 1 92250-1 92922 bp Feature: gene Location: 192945-193847 bp Ori: CDR89421.1 Gene: xerC Feature: domain Description: XerC Location: 192954-193833 bp Feature: domain Description: XerC Location: 1 92954-1 93833 bp Feature: gene Location: 610283-610741 bp Ori: CDR89790.1 Feature: domain Description: FNR_iron_sulfur_binding_2 Location: 610310-610451 bp Feature: domain Description: FNR_iron_sulfur_binding_2 Location: 61 031 0-61 0451 bp Feature: domain Description: fer2 Location: 610511-610733 bp Feature: domain Description: fer2 Location: 61 051 1 -61 0733 bp Feature: gene Location: 610738-611436 bp Ori: CDR89791.1 Feature: domain Description: DesA Location: 610759-611209 bp Feature: domain Description: DesA Location: 61 0759-61 1 209 bp Feature: gene Location: 611420-612745 bp Ori: CDR89792.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 611681-612296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 1 681 -61 2296 bp Feature: domain Description: GIIM Note: maturase Location: 612350-612578 bp Feature: domain Description: GIIM Note: maturase Location: 61 2350-61 2578 bp Feature: gene Location: 613321-613848 bp Ori: CDR89793.1 Feature: domain Description: SH3_16 Location: 613528-613573 bp Feature: domain Description: SH3_1 6 Location: 61 3528-61 3573 bp Feature: domain Description: SH3_16 Location: 613573-613621 bp Feature: domain Description: SH3_1 6 Location: 61 3573-61 3621 bp Feature: domain Description: SH3_16 Location: 613669-613717 bp Feature: domain Description: SH3_1 6 Location: 61 3669-61 371 7 bp Feature: domain Description: SH3_16 Location: 613717-613765 bp Feature: domain Description: SH3_1 6 Location: 61 371 7-61 3765 bp Feature: gene Location: 614124-615020 bp Ori: CDR89794.1 Feature: domain Description: YfdV Location: 614133-615015 bp Feature: domain Description: YfdV Location: 61 41 33-61 501 5 bp Feature: gene Location: 1000678-1000947 bp Ori: CDR90161.1 Gene: rpsO Feature: domain Description: rpsO Location: 1000681-1000945 bp Feature: domain Description: rpsO Location: 1 000681 -1 000945 bp Feature: gene Location: 1001119-1003224 bp Ori: CDR90162.1 Gene: pnp Feature: domain Description: polynuc_phos Location: 1001146-1003195 bp Feature: domain Description: polynuc_phos Location: 1 001 1 46-1 0031 95 bp Feature: gene Location: 1003807-1005132 bp Ori: CDR90163.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1004068-1004683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 004068-1 004683 bp Feature: domain Description: GIIM Note: maturase Location: 1004737-1004965 bp Feature: domain Description: GIIM Note: maturase Location: 1 004737-1 004965 bp Feature: gene Location: 1005284-1006801 bp Ori: CDR90164.1 Feature: domain Description: LZ_Tnp_IS66 Location: 1005347-1005581 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 005347-1 005581 bp Feature: domain Description: zf-IS66 Location: 1005611-1005734 bp Feature: domain Description: zf-IS66 Location: 1 00561 1 -1 005734 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1005779-1006634 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 005779-1 006634 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1006655-1006769 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 006655-1 006769 bp Feature: gene Location: 1006959-1007261 bp Ori: CDR90165.1 Feature: domain Description: DUF2845 Location: 1007022-1007247 bp Feature: domain Description: DUF2845 Location: 1 007022-1 007247 bp Feature: gene Location: 1042908-1044632 bp Ori: CDR90198.1 Gene: ilvI Feature: domain Description: PRK06466 Location: 1042911-1044630 bp Feature: domain Description: PRK06466 Location: 1 04291 1 -1 044630 bp Feature: gene Location: 1044634-1045125 bp Ori: CDR90199.1 Gene: ilvH Feature: domain Description: ilvH Location: 1044637-1045114 bp Feature: domain Description: ilvH Location: 1 044637-1 0451 1 4 bp Feature: gene Location: 1045701-1047026 bp Ori: CDR90200.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1045962-1046577 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 045962-1 046577 bp Feature: domain Description: GIIM Note: maturase Location: 1046631-1046859 bp Feature: domain Description: GIIM Note: maturase Location: 1 046631 -1 046859 bp Feature: gene Location: 1047623-1048948 bp Ori: CDR90201.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1047884-1048499 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 047884-1 048499 bp Feature: domain Description: GIIM Note: maturase Location: 1048553-1048781 bp Feature: domain Description: GIIM Note: maturase Location: 1 048553-1 048781 bp Feature: gene Location: 1049028-1049909 bp Ori: CDR90202.1 Gene: ilvY Feature: domain Description: PRK11716 Location: 1049106-1049901 bp Feature: domain Description: PRK1 1 71 6 Location: 1 0491 06-1 049901 bp Feature: gene Location: 1050035-1051051 bp Ori: CDR90203.1 Gene: ilvC Feature: domain Description: PRK05479 Location: 1050038-1051019 bp Feature: domain Description: PRK05479 Location: 1 050038-1 051 01 9 bp Feature: gene Location: 1139874-1141451 bp Ori: CDR90281.1 Gene: guaA Feature: domain Description: guaA Location: 1139892-1141449 bp Feature: domain Description: guaA Location: 1 1 39892-1 1 41 449 bp Feature: gene Location: 1141655-1141858 bp Ori: CDR90282.1 Feature: domain Description: TnpB_IS66 Location: 1141685-1141835 bp Feature: domain Description: TnpB_IS66 Location: 1 1 41 685-1 1 41 835 bp Feature: gene Location: 1142370-1143638 bp Ori: CDR90283.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1142574-1143231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 42574-1 1 43231 bp Feature: domain Description: GIIM Note: maturase Location: 1143309-1143531 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 43309-1 1 43531 bp Feature: gene Location: 1143672-1143875 bp Ori: CDR90284.1 Feature: domain Description: TnpB_IS66 Location: 1143696-1143840 bp Feature: domain Description: TnpB_IS66 Location: 1 1 43696-1 1 43840 bp Feature: gene Location: 1143895-1145412 bp Ori: CDR90285.1 Feature: domain Description: LZ_Tnp_IS66 Location: 1143958-1144192 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 1 43958-1 1 441 92 bp Feature: domain Description: zf-IS66 Location: 1144216-1144345 bp Feature: domain Description: zf-IS66 Location: 1 1 4421 6-1 1 44345 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1144390-1145245 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 1 44390-1 1 45245 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1145266-1145380 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 1 45266-1 1 45380 bp Feature: gene Location: 1452306-1452989 bp Ori: CDR90583.1 Feature: domain Description: LrgB Location: 1452321-1452984 bp Feature: domain Description: LrgB Location: 1 452321 -1 452984 bp Feature: gene Location: 1453288-1454895 bp Ori: CDR90584.1 Gene: mqoB Feature: domain Description: PRK05257 Location: 1453357-1454830 bp Feature: domain Description: PRK05257 Location: 1 453357-1 454830 bp Feature: gene Location: 1455335-1456702 bp Ori: CDR90585.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1455665-1456280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 455665-1 456280 bp Feature: domain Description: GIIM Note: maturase Location: 1456340-1456550 bp Feature: domain Description: GIIM Note: maturase Location: 1 456340-1 456550 bp Feature: gene Location: 1457214-1457906 bp Ori: CDR90586.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1457220-1457484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 457220-1 457484 bp Feature: domain Description: GIIM Note: maturase Location: 1457544-1457754 bp Feature: domain Description: GIIM Note: maturase Location: 1 457544-1 457754 bp Feature: gene Location: 1458595-1459308 bp Ori: CDR90587.1 Feature: domain Description: Trypsin_2 Location: 1458667-1459165 bp Feature: domain Description: Trypsin_2 Location: 1 458667-1 4591 65 bp Feature: gene Location: 1459505-1461988 bp Ori: CDR90588.1 Gene: plsB Feature: domain Description: PRK04974 Location: 1459517-1461971 bp Feature: domain Description: PRK04974 Location: 1 45951 7-1 461 971 bp Feature: gene Location: 1510689-1510859 bp Feature: gene Location: 1510911-1511114 bp Ori: CDR90632.1 Feature: domain Description: TnpB_IS66 Location: 1510941-1511091 bp Feature: domain Description: TnpB_IS66 Location: 1 51 0941 -1 51 1 091 bp Feature: gene Location: 1511626-1512894 bp Ori: CDR90633.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1511830-1512487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 51 1 830-1 51 2487 bp Feature: domain Description: GIIM Note: maturase Location: 1512565-1512787 bp Feature: domain Description: GIIM Note: maturase Location: 1 51 2565-1 51 2787 bp Feature: gene Location: 1512928-1513131 bp Ori: CDR90634.1 Feature: domain Description: TnpB_IS66 Location: 1512952-1513096 bp Feature: domain Description: TnpB_IS66 Location: 1 51 2952-1 51 3096 bp Feature: gene Location: 1514447-1514770 bp Ori: CDR90635.1 Gene: fdxA Feature: domain Description: PreA Location: 1514459-1514636 bp Feature: domain Description: PreA Location: 1 51 4459-1 51 4636 bp Feature: domain Description: DUF3470 Location: 1514645-1514768 bp Feature: domain Description: DUF3470 Location: 1 51 4645-1 51 4768 bp Feature: gene Location: 1604493-1605731 bp Ori: CDR90725.1 Feature: domain Description: PRK06635 Location: 1604496-1605708 bp Feature: domain Description: PRK06635 Location: 1 604496-1 605708 bp Feature: gene Location: 1605922-1606107 bp Ori: CDR90726.1 Gene: csrA Feature: domain Description: PRK01712 Location: 1605925-1606090 bp Feature: domain Description: PRK01 71 2 Location: 1 605925-1 606090 bp Feature: gene Location: 1607404-1608771 bp Ori: CDR90727.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1607734-1608349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 607734-1 608349 bp Feature: domain Description: GIIM Note: maturase Location: 1608409-1608619 bp Feature: domain Description: GIIM Note: maturase Location: 1 608409-1 60861 9 bp Feature: gene Location: 1608866-1609360 bp Ori: CDR90728.1 Feature: domain Description: DUF4124 Location: 1608923-1609016 bp Feature: domain Description: DUF41 24 Location: 1 608923-1 60901 6 bp Feature: domain Description: SmpA_OmlA Location: 1609196-1609355 bp Feature: domain Description: SmpA_OmlA Location: 1 6091 96-1 609355 bp Feature: gene Location: 1609683-1611125 bp Ori: CDR90729.1 Gene: mgtE1 Feature: domain Description: MgtE Location: 1609806-1611120 bp Feature: domain Description: MgtE Location: 1 609806-1 61 1 1 20 bp Feature: gene Location: 1731138-1731539 bp Ori: CDR90861.1 Feature: domain Description: HNHc Note: nucleases Location: 1731339-1731498 bp Feature: domain Description: HNHc Note: nucleases Location: 1 731 339-1 731 498 bp Feature: gene Location: 1731845-1732861 bp Ori: CDR90862.1 Feature: domain Description: DDE_Tnp_IS66 Location: 1731869-1732712 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 731 869-1 73271 2 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1732733-1732844 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 732733-1 732844 bp Feature: gene Location: 1733034-1733810 bp Ori: CDR90863.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1733130-1733439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7331 30-1 733439 bp Feature: gene Location: 1734383-1734955 bp Ori: CDR90864.1 Feature: domain Description: IbpA Location: 1734542-1734932 bp Feature: domain Description: IbpA Location: 1 734542-1 734932 bp Feature: gene Location: 1735056-1737905 bp Ori: CDR90865.1 Gene: clpC Feature: domain Description: ClpA Location: 1735392-1737774 bp Feature: domain Description: ClpA Location: 1 735392-1 737774 bp Feature: gene Location: 1769217-1769420 bp Ori: CDR90881.1 Feature: domain Description: TnpB_IS66 Location: 1769247-1769397 bp Feature: domain Description: TnpB_IS66 Location: 1 769247-1 769397 bp Feature: gene Location: 1769932-1771200 bp Ori: CDR90882.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1770136-1770793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7701 36-1 770793 bp Feature: domain Description: GIIM Note: maturase Location: 1770871-1771093 bp Feature: domain Description: GIIM Note: maturase Location: 1 770871 -1 771 093 bp Feature: gene Location: 1771234-1771437 bp Ori: CDR90883.1 Feature: domain Description: TnpB_IS66 Location: 1771258-1771402 bp Feature: domain Description: TnpB_IS66 Location: 1 771 258-1 771 402 bp Feature: gene Location: 1771458-1771868 bp Ori: CDR90884.1 Feature: domain Description: LZ_Tnp_IS66 Location: 1771563-1771716 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 771 563-1 771 71 6 bp Feature: gene Location: 2136715-2137038 bp Feature: gene Location: 2138259-2138528 bp Feature: gene Location: 2138897-2140264 bp Ori: CDR91210.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2139227-2139842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 39227-21 39842 bp Feature: domain Description: GIIM Note: maturase Location: 2139902-2140112 bp Feature: domain Description: GIIM Note: maturase Location: 21 39902-21 401 1 2 bp Feature: gene Location: 2140518-2140724 bp Feature: gene Location: 2140833-2141975 bp Ori: CDR91212.1 Feature: domain Description: efp_adjacent_2 Location: 2140845-2141949 bp Feature: domain Description: efp_adjacent_2 Location: 21 40845-21 41 949 bp Feature: gene Location: 2717701-2718102 bp Ori: CDR91779.1 Feature: domain Description: HNHc Note: nucleases Location: 2717902-2718061 bp Feature: domain Description: HNHc Note: nucleases Location: 271 7902-271 8061 bp Feature: gene Location: 2718386-2719657 bp Ori: CDR91780.1 Feature: domain Description: DDE_Tnp_1 Location: 2718713-2719376 bp Feature: domain Description: DDE_Tnp_1 Location: 271 871 3-271 9376 bp Feature: gene Location: 2719767-2721080 bp Ori: CDR91781.1 Feature: domain Description: RVT_N Location: 2719827-2720070 bp Feature: domain Description: RVT_N Location: 271 9827-2720070 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2720118-2720769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27201 1 8-2720769 bp Feature: domain Description: GIIM Note: maturase Location: 2720847-2720949 bp Feature: domain Description: GIIM Note: maturase Location: 2720847-2720949 bp Feature: gene Location: 2722375-2723565 bp Ori: CDR91782.1 Feature: domain Description: PRK15426 Location: 2723020-2723527 bp Feature: domain Description: PRK1 5426 Location: 2723020-2723527 bp Feature: gene Location: 2723763-2724689 bp Ori: CDR91783.1 Feature: domain Description: COG3179 Location: 2723808-2724369 bp Feature: domain Description: COG31 79 Location: 2723808-2724369 bp Feature: gene Location: 2862267-2864027 bp Ori: CDR91921.1 Feature: domain Description: YfbK Location: 2862276-2863503 bp Feature: domain Description: YfbK Location: 2862276-2863503 bp Feature: gene Location: 2864024-2865664 bp Ori: CDR91922.1 Feature: domain Description: BatD Location: 2864057-2865410 bp Feature: domain Description: BatD Location: 2864057-286541 0 bp Feature: gene Location: 2866207-2867532 bp Ori: CDR91923.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2866468-2867083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2866468-2867083 bp Feature: domain Description: GIIM Note: maturase Location: 2867137-2867365 bp Feature: domain Description: GIIM Note: maturase Location: 28671 37-2867365 bp Feature: gene Location: 2868113-2870467 bp Ori: CDR91924.1 Feature: domain Description: COG1033 Location: 2868149-2870444 bp Feature: domain Description: COG1 033 Location: 28681 49-2870444 bp Feature: gene Location: 2870486-2871634 bp Ori: CDR91925.1 Feature: domain Description: COG4447 Location: 2870630-2871632 bp Feature: domain Description: COG4447 Location: 2870630-2871 632 bp Feature: gene Location: 2933358-2933819 bp Ori: CDR91985.1 Feature: domain Description: DDE_Tnp_IS66 Location: 2933382-2933652 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2933382-2933652 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2933673-2933787 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2933673-2933787 bp Feature: gene Location: 2933807-2933974 bp Ori: CDR91986.1 Feature: domain Description: TnpB_IS66 Location: 2933831-2933969 bp Feature: domain Description: TnpB_IS66 Location: 2933831 -2933969 bp Feature: gene Location: 2934008-2935276 bp Ori: CDR91987.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2934212-2934869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 293421 2-2934869 bp Feature: domain Description: GIIM Note: maturase Location: 2934947-2935169 bp Feature: domain Description: GIIM Note: maturase Location: 2934947-29351 69 bp Feature: gene Location: 2935788-2935991 bp Ori: CDR91988.1 Feature: domain Description: TnpB_IS66 Location: 2935818-2935968 bp Feature: domain Description: TnpB_IS66 Location: 293581 8-2935968 bp Feature: gene Location: 2936367-2937374 bp Ori: CDR91989.1 Gene: rpoS Feature: domain Description: PRK05657 Location: 2936487-2937369 bp Feature: domain Description: PRK05657 Location: 2936487-2937369 bp Feature: gene Location: 3117501-3118547 bp Ori: CDR92169.1 Gene: pyrC3 Feature: domain Description: PRK05451 Location: 3117507-3118530 bp Feature: domain Description: PRK05451 Location: 31 1 7507-31 1 8530 bp Feature: gene Location: 3118544-3119218 bp Ori: CDR92170.1 Gene: rnt Feature: domain Description: RNaseT Location: 3118610-3119204 bp Feature: domain Description: RNaseT Location: 31 1 861 0-31 1 9204 bp Feature: gene Location: 3119397-3120722 bp Ori: CDR92171.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3119658-3120273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 1 9658-31 20273 bp Feature: domain Description: GIIM Note: maturase Location: 3120327-3120555 bp Feature: domain Description: GIIM Note: maturase Location: 31 20327-31 20555 bp Feature: gene Location: 3121782-3122000 bp Ori: CDR92172.1 Gene: bfd Feature: domain Description: Bfd Location: 3121785-3121962 bp Feature: domain Description: Bfd Location: 31 21 785-31 21 962 bp Feature: gene Location: 3122072-3122443 bp Ori: CDR92173.1 Feature: domain Description: DUF5064 Location: 3122075-3122423 bp Feature: domain Description: DUF5064 Location: 31 22075-31 22423 bp Feature: gene Location: 3392005-3392496 bp Ori: CDR92426.1 Feature: domain Description: LZ_Tnp_IS66 Location: 3392068-3392290 bp Feature: domain Description: LZ_Tnp_IS66 Location: 3392068-3392290 bp Feature: gene Location: 3392516-3392719 bp Ori: CDR92427.1 Feature: domain Description: TnpB_IS66 Location: 3392540-3392684 bp Feature: domain Description: TnpB_IS66 Location: 3392540-3392684 bp Feature: gene Location: 3392753-3394021 bp Ori: CDR92428.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3392957-3393614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3392957-339361 4 bp Feature: domain Description: GIIM Note: maturase Location: 3393692-3393914 bp Feature: domain Description: GIIM Note: maturase Location: 3393692-339391 4 bp Feature: gene Location: 3394533-3394736 bp Ori: CDR92429.1 Feature: domain Description: TnpB_IS66 Location: 3394563-3394713 bp Feature: domain Description: TnpB_IS66 Location: 3394563-339471 3 bp Feature: gene Location: 3394896-3395849 bp Ori: CDR92430.1 Feature: domain Description: InsA Location: 3395016-3395286 bp Feature: domain Description: InsA Location: 339501 6-3395286 bp Feature: domain Description: DDE_Tnp_IS1595 Location: 3395307-3395745 bp Feature: domain Description: DDE_Tnp_IS1 595 Location: 3395307-3395745 bp Feature: gene Location: 3597147-3598067 bp Ori: CDR92630.1 Feature: domain Description: NlpD Location: 3597471-3598059 bp Feature: domain Description: NlpD Location: 3597471 -3598059 bp Feature: gene Location: 3598146-3598601 bp Ori: CDR92631.1 Feature: domain Description: DciA Location: 3598188-3598437 bp Feature: domain Description: DciA Location: 35981 88-3598437 bp Feature: gene Location: 3598772-3600097 bp Ori: CDR92632.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3599033-3599648 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3599033-3599648 bp Feature: domain Description: GIIM Note: maturase Location: 3599702-3599930 bp Feature: domain Description: GIIM Note: maturase Location: 3599702-3599930 bp Feature: gene Location: 3600683-3601594 bp Ori: CDR92633.1 Gene: lpxC Feature: domain Description: LpxC Location: 3600686-3601568 bp Feature: domain Description: LpxC Location: 3600686-3601 568 bp Feature: gene Location: 3601706-3602899 bp Ori: CDR92634.1 Feature: domain Description: PRK09330 Location: 3601724-3602894 bp Feature: domain Description: PRK09330 Location: 3601 724-3602894 bp Feature: gene Location: 3954588-3954761 bp Feature: gene Location: 3954990-3955418 bp Feature: gene Location: 3955683-3957008 bp Ori: CDR92993.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3955944-3956559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3955944-3956559 bp Feature: domain Description: GIIM Note: maturase Location: 3956613-3956841 bp Feature: domain Description: GIIM Note: maturase Location: 395661 3-3956841 bp Feature: gene Location: 3957581-3958003 bp Feature: gene Location: 3958017-3958517 bp Ori: CDR92995.1 Feature: domain Description: IcmL Location: 3958110-3958503 bp Feature: domain Description: IcmL Location: 39581 1 0-3958503 bp Feature: gene Location: 4257643-4258899 bp Ori: CDR93278.1 Gene: istA13 Feature: domain Description: LZ_Tnp_IS66 Location: 4257769-4257988 bp Feature: domain Description: LZ_Tnp_IS66 Location: 4257769-4257988 bp Feature: domain Description: zf-IS66 Location: 4258009-4258135 bp Feature: domain Description: zf-IS66 Location: 4258009-42581 35 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4258177-4258801 bp Feature: domain Description: DDE_Tnp_IS66 Location: 42581 77-4258801 bp Feature: gene Location: 4258961-4259296 bp Ori: CDR93279.1 Feature: domain Description: TnpB_IS66 Location: 4258979-4259267 bp Feature: domain Description: TnpB_IS66 Location: 4258979-4259267 bp Feature: gene Location: 4260019-4261344 bp Ori: CDR93280.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4260280-4260895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4260280-4260895 bp Feature: domain Description: GIIM Note: maturase Location: 4260949-4261177 bp Feature: domain Description: GIIM Note: maturase Location: 4260949-4261 1 77 bp Feature: gene Location: 4262428-4262748 bp Ori: CDR93281.1 Feature: domain Description: couple_hipB Location: 4262458-4262623 bp Feature: domain Description: couple_hipB Location: 4262458-4262623 bp Feature: gene Location: 4262745-4264064 bp Ori: CDR93282.1 Gene: hipA3 Feature: domain Description: HipA_So_like Location: 4262808-4263972 bp Feature: domain Description: HipA_So_like Location: 4262808-4263972 bp Feature: gene Location: 4357290-4358867 bp Ori: CDR93365.1 Gene: ABC.PE.S Feature: domain Description: PBP2_DppA_like Location: 4357347-4358814 bp Feature: domain Description: PBP2_DppA_like Location: 4357347-435881 4 bp Feature: gene Location: 4359001-4359675 bp Ori: CDR93366.1 Gene: radC3 Feature: domain Description: PRK00024 Location: 4359004-4359673 bp Feature: domain Description: PRK00024 Location: 4359004-4359673 bp Feature: gene Location: 4361056-4362789 bp Ori: CDR93367.1 Feature: domain Description: RVT_N Location: 4361116-4361359 bp Feature: domain Description: RVT_N Location: 4361 1 1 6-4361 359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4361407-4362058 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4361 407-4362058 bp Feature: domain Description: GIIM Note: maturase Location: 4362136-4362364 bp Feature: domain Description: GIIM Note: maturase Location: 43621 36-4362364 bp Feature: domain Description: HNHc Note: nucleases Location: 4362592-4362748 bp Feature: domain Description: HNHc Note: nucleases Location: 4362592-4362748 bp Feature: gene Location: 4362997-4364205 bp Ori: CDR93368.1 Gene: coaBC Feature: domain Description: PRK05579 Location: 4363003-4364197 bp Feature: domain Description: PRK05579 Location: 4363003-43641 97 bp Feature: gene Location: 4364208-4364663 bp Ori: CDR93369.1 Gene: dut Feature: domain Description: dut Location: 4364214-4364658 bp Feature: domain Description: dut Location: 436421 4-4364658 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), RVT-GII, GIIM (pfam08388), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), PRK11235 (type II toxin-antitoxin system RelB/DinJ family antitoxin), COG4951 (Uncharacterized protein ), SSL2 (COG1061)
aspA (TIGR00839), ARO8 (COG1167), PaiB (COG2808), KOG3267 (KOG3267, Uncharacterized conserved protein ), PRK10748 (5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB), XerC (COG4973), FNR_iron_sulfur_binding_2 (cd06216), fer2 (cl00159), DesA (COG3239), SH3_16 (pfam18348)
YfdV (COG0679), rpsO (PRK05626), polynuc_phos (TIGR03591), DUF2845 (pfam11006), PRK06466 (acetolactate synthase 3 large subunit), ilvH (PRK11895), PRK11716 (HTH-type transcriptional activator IlvY), PRK05479 (ketol-acid reductoisomerase; Provisional), guaA (PRK00074), LrgB (pfam04172)
PRK05257 (malate:quinone oxidoreductase; Validated), Trypsin_2 (pfam13365), PRK04974 (glycerol-3-phosphate 1-O-acyltransferase PlsB), PreA (COG1146), DUF3470 (pfam11953), PRK06635 (aspartate kinase; Reviewed), PRK01712 (carbon storage regulator CsrA), DUF4124 (pfam13511), SmpA_OmlA (pfam04355), MgtE (pfam01769)
HNHc (smart00507), IbpA (COG0071), ClpA (TIGR02639), efp_adjacent_2, DDE_Tnp_1 (pfam01609), RVT_N (pfam13655), PRK15426 (cellulose biosynthesis regulator YedQ), COG3179 (Predicted chitinase ), YfbK (COG2304), BatD (pfam13584)
COG1033 (Predicted exporter protein, RND superfamily ), COG4447 (Uncharacterized protein related to plant photosystem II stability/assembly factor ), PRK05657 (RNA polymerase sigma factor RpoS; Validated), PRK05451 (dihydroorotase; Provisional), RNaseT (TIGR01298), Bfd (COG2906), DUF5064 (pfam16703), InsA (COG3677), DDE_Tnp_IS1595 (pfam12762), NlpD (COG0739)
DciA, LpxC (pfam03331), PRK09330 (cell division protein FtsZ; Validated), IcmL (cl12928), couple_hipB (TIGR03070), HipA_So_like (cd17809), PBP2_DppA_like (cd08493), PRK00024 (DNA repair protein RadC), PRK05579 (bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated), dut (TIGR00576)