myRT

myRT report for GCA_000959345.1_ASM95934v1

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Seq: CP009550.1 Burkholderia pseudomallei PB08298010 chromosome II, complete sequence (3190204 bp)
Overview 1 RT 1: 1256016-1263061 bp Neighborhood of RT #1 [1256016, 1263069] IscR TrxB RVT-GII GIIM LysR PRK07079 Feature: gene Location: 1256016-1256477 bp Ori: AJX93424.1 Feature: domain Description: IscR Location: 1256028-1256397 bp Feature: domain Description: IscR Location: 1 256028-1 256397 bp Feature: gene Location: 1256606-1257517 bp Ori: AJX92600.1 Feature: domain Description: TrxB Location: 1256615-1257491 bp Feature: domain Description: TrxB Location: 1 25661 5-1 257491 bp Feature: gene Location: 1258381-1259913 bp Ori: AJX93455.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1258654-1259392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 258654-1 259392 bp Feature: domain Description: GIIM Note: maturase Location: 1259503-1259674 bp Feature: domain Description: GIIM Note: maturase Location: 1 259503-1 259674 bp Feature: gene Location: 1260598-1261551 bp Ori: AJX93628.1 Feature: domain Description: LysR Location: 1260637-1261510 bp Feature: domain Description: LysR Location: 1 260637-1 261 51 0 bp Feature: gene Location: 1261651-1263069 bp Ori: AJX93014.1 Feature: domain Description: PRK07079 Location: 1261672-1263061 bp Feature: domain Description: PRK07079 Location: 1 261 672-1 263061 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IscR (TIGR02010), TrxB (COG0492), RVT-GII, GIIM (pfam08388), LysR (COG0583), PRK07079 (hypothetical protein; Provisional)

Seq: CP009551.1 Burkholderia pseudomallei PB08298010 chromosome I, complete sequence (4185347 bp)
Overview 1 RT 1: 3563517-3567376 bp Neighborhood of RT #1 [3563517, 3567516] InsE HTH_21 RVT-GII GIIM PHA02517 DUF3800 Feature: gene Location: 3563517-3563825 bp Ori: AJX95320.1 Feature: domain Description: InsE Location: 3563520-3563793 bp Feature: domain Description: InsE Location: 356352 0-3563793 bp Feature: gene Location: 3563822-3564229 bp Ori: AJX95557.1 Feature: domain Description: HTH_21 Location: 3563924-3564074 bp Feature: domain Description: HTH_2 1 Location: 356392 4-3564074 bp Feature: gene Location: 3564871-3566388 bp Ori: AJX95616.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3565129-3565867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 356512 9-3565867 bp Feature: domain Description: GIIM Note: maturase Location: 3565978-3566149 bp Feature: domain Description: GIIM Note: maturase Location: 3565978-3566149 bp Feature: gene Location: 3566484-3566939 bp Ori: AJX96671.1 Feature: domain Description: PHA02517 Location: 3566493-3566925 bp Feature: domain Description: PHA02 517 Location: 3566493-356692 5 bp Feature: gene Location: 3566923-3567516 bp Ori: AJX95404.1 Feature: domain Description: DUF3800 Location: 3566938-3567376 bp Feature: domain Description: DUF3800 Location: 3566938-3567376 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), HTH_21 (pfam13276), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), DUF3800 (pfam12686)