myRT

myRT report for GCA_000968195.1_ASM96819v1

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Seq: FO704550.1 Xenorhabdus doucetiae str. FRM16 chromosome, complete genome (4195202 bp)
Overview 1 RT 1: 233615-237565 bp 2 RT 2: 244819-247810 bp 3 RT 3: 2960896-2966914 bp Neighborhood of RT #1 [233615, 237669] COG3547 DDE_Tnp_1_3 RVT-GII GIIM DDE_Tnp_1_3 MFS_MefA_like Neighborhood of RT #2 [244819, 247863] DDE_Tnp_1_3 RVT-GII GIIM DDE_Tnp_1_3 COG3547 Neighborhood of RT #3 [2960896, 2966916] COG3747 YmfN RVT-AbiP2 HTH_35 HemF Feature: gene Location: 233615-234649 bp Ori: CDG15940.1 Feature: domain Description: COG3547 Location: 233633-234596 bp Feature: domain Description: COG3547 Location: 233633-234596 bp Feature: gene Location: 234727-235044 bp Ori: CDG15941.1 Feature: domain Description: DDE_Tnp_1_3 Location: 234922-235042 bp Feature: domain Description: DDE_Tnp_1 _3 Location: 234922-235042 bp Feature: gene Location: 235227-235910 bp Ori: CDG15942.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 235263-235548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 235263-235548 bp Feature: domain Description: GIIM Note: maturase Location: 235683-235836 bp Feature: domain Description: GIIM Note: maturase Location: 235683-235836 bp Feature: gene Location: 235954-236382 bp Ori: CDG15943.1 Feature: domain Description: DDE_Tnp_1_3 Location: 235957-236272 bp Feature: domain Description: DDE_Tnp_1 _3 Location: 235957-236272 bp Feature: gene Location: 236401-237669 bp Ori: CDG15944.1 Feature: domain Description: MFS_MefA_like Location: 236476-237565 bp Feature: domain Description: MFS_MefA_like Location: 236476-237565 bp Feature: gene Location: 244819-244950 bp Feature: gene Location: 245096-245524 bp Ori: CDG15957.1 Feature: domain Description: DDE_Tnp_1_3 Location: 245099-245414 bp Feature: domain Description: DDE_Tnp_1 _3 Location: 245099-24541 4 bp Feature: gene Location: 245568-246251 bp Ori: CDG15958.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 245604-245889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 245604-245889 bp Feature: domain Description: GIIM Note: maturase Location: 246024-246177 bp Feature: domain Description: GIIM Note: maturase Location: 246024-2461 77 bp Feature: gene Location: 246434-246751 bp Ori: CDG15959.1 Feature: domain Description: DDE_Tnp_1_3 Location: 246629-246749 bp Feature: domain Description: DDE_Tnp_1 _3 Location: 246629-246749 bp Feature: gene Location: 246829-247863 bp Ori: CDG15960.1 Feature: domain Description: COG3547 Location: 246847-247810 bp Feature: domain Description: COG3547 Location: 246847-24781 0 bp Feature: gene Location: 2960896-2961249 bp Ori: CDG18454.1 Feature: domain Description: COG3747 Location: 2960902-2961241 bp Feature: domain Description: COG3747 Location: 2960902-2961 241 bp Feature: gene Location: 2961246-2962919 bp Ori: CDG18455.1 Feature: domain Description: YmfN Location: 2961264-2962887 bp Feature: domain Description: YmfN Location: 2961 264-2962887 bp Feature: gene Location: 2963235-2964779 bp Ori: CDG18456.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2963652-2964105 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2963652-29641 05 bp Feature: gene Location: 2965387-2965650 bp Ori: CDG18457.1 Feature: domain Description: HTH_35 Location: 2965408-2965627 bp Feature: domain Description: HTH_35 Location: 2965408-2965627 bp Feature: gene Location: 2966008-2966916 bp Ori: CDG18458.1 Gene: hemF Feature: domain Description: HemF Location: 2966029-2966914 bp Feature: domain Description: HemF Location: 2966029-296691 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), DDE_Tnp_1_3 (pfam13612), RVT-GII, GIIM (pfam08388), MFS_MefA_like (cd06173), COG3747 (Phage terminase, small subunit ), YmfN (COG4626), RVT-AbiP2, HTH_35 (pfam13693), HemF (COG0408)