myRT

myRT report for GCA_000968375.1_ASM96837v1

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Seq: CP009933.1 Clostridium scatologenes strain ATCC 25775, complete genome (5749410 bp)
Overview 1 RT 1: 2374366-2390200 bp 2 RT 2: 3199177-3202830 bp Neighborhood of RT #1 [2374366, 2390319] hsdR HsdR dnaG RVT-UG25 DUF2357 PDDEXK_7 Neighborhood of RT #2 [3199177, 3202856] XRE RVT-GII GIIM SASP YozG Feature: gene Location: 2374366-2377638 bp Feature: domain Description: hsdR Location: 2374372-2374816 bp Feature: domain Description: hsdR Location: 2374372-237481 6 bp Feature: domain Description: HsdR Location: 2374939-2377624 bp Feature: domain Description: HsdR Location: 2374939-2377624 bp Feature: gene Location: 2378282-2380249 bp Feature: gene Location: 2380665-2388464 bp Feature: domain Description: dnaG Location: 2380746-2381979 bp Feature: domain Description: dnaG Location: 2380746-2381 979 bp Feature: RT Description: RVT-UG25 Note: UG25 RT Location: 2382720-2383236 bp Feature: RT Description: RVT-UG25 Note: UG25 RT Location: 2382720-2383236 bp Feature: gene Location: 2388562-2388741 bp Feature: gene Location: 2388793-2390319 bp Feature: domain Description: DUF2357 Location: 2388937-2389663 bp Feature: domain Description: DUF2357 Location: 2388937-2389663 bp Feature: domain Description: PDDEXK_7 Location: 2389735-2390200 bp Feature: domain Description: PDDEXK_7 Location: 2389735-2390200 bp Feature: gene Location: 3199177-3199380 bp Feature: domain Description: XRE Location: 3199180-3199375 bp Feature: domain Description: XRE Location: 31 991 80-31 99375 bp Feature: gene Location: 3199381-3199791 bp Feature: gene Location: 3199877-3201295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3200228-3200846 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3200228-3200846 bp Feature: domain Description: GIIM Note: maturase Location: 3200897-3201131 bp Feature: domain Description: GIIM Note: maturase Location: 3200897-3201 1 31 bp Feature: gene Location: 3201765-3201956 bp Feature: domain Description: SASP Location: 3201780-3201954 bp Feature: domain Description: SASP Location: 3201 780-3201 954 bp Feature: gene Location: 3202617-3202856 bp Feature: domain Description: YozG Location: 3202620-3202830 bp Feature: domain Description: YozG Location: 3202620-3202830 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT hsdR (TIGR00348), HsdR (COG4096), dnaG (TIGR01391), RVT-UG25, DUF2357 (pfam09823), PDDEXK_7 (pfam04411), XRE (COG1476), RVT-GII, GIIM (pfam08388), SASP (pfam00269)
YozG (COG3655)