myRT

myRT report for GCA_000969645.2_ASM96964v2

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Seq: CP014222.1 Janthinobacterium sp. B9-8, complete genome (4726850 bp)
Overview 1 RT 1: 28318-32236 bp 2 RT 2: 4156187-4160421 bp 3 RT 3: 4275865-4280297 bp Neighborhood of RT #1 [28318, 32236] ABC_Iron-Siderophores_B12_Hemin ABC_Iron-Siderophores_B12_Hemin RVT-Retrons PyocinActivator Neighborhood of RT #2 [4156187, 4160421] InsE PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #3 [4275865, 4280317] psd PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 28318-28602 bp Feature: gene Location: 29022-30359 bp Ori: AMC33139.1 Feature: domain Description: ABC_Iron-Siderophores_B12_Hemin Location: 29073-29172 bp Feature: domain Description: ABC_Iron-Siderophores_B1 2_Hemin Location: 29073-291 72 bp Feature: domain Description: ABC_Iron-Siderophores_B12_Hemin Location: 29577-29778 bp Feature: domain Description: ABC_Iron-Siderophores_B1 2_Hemin Location: 29577-29778 bp Feature: gene Location: 30362-31312 bp Ori: AMC33140.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 30476-31028 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 30476-31 028 bp Feature: gene Location: 31766-32020 bp Ori: AMC33141.1 Feature: domain Description: PyocinActivator Location: 31775-31979 bp Feature: domain Description: PyocinActivator Location: 31 775-31 979 bp Feature: gene Location: 32021-32236 bp Feature: gene Location: 4156187-4156507 bp Ori: AMC36483.1 Feature: domain Description: InsE Location: 4156190-4156487 bp Feature: domain Description: InsE Location: 41 561 90-41 56487 bp Feature: gene Location: 4156504-4156926 bp Ori: AMC36484.1 Feature: domain Description: PHA02517 Location: 4156558-4156906 bp Feature: domain Description: PHA0251 7 Location: 41 56558-41 56906 bp Feature: gene Location: 4157576-4159093 bp Ori: AMC36485.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4157834-4158572 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 57834-41 58572 bp Feature: domain Description: GIIM Note: maturase Location: 4158668-4158854 bp Feature: domain Description: GIIM Note: maturase Location: 41 58668-41 58854 bp Feature: gene Location: 4159204-4159650 bp Ori: AMC36486.1 Feature: domain Description: PHA02517 Location: 4159207-4159624 bp Feature: domain Description: PHA0251 7 Location: 41 59207-41 59624 bp Feature: gene Location: 4159762-4160421 bp Feature: gene Location: 4275865-4276704 bp Ori: AMC36579.1 Feature: domain Description: psd Location: 4275871-4276699 bp Feature: domain Description: psd Location: 4275871 -4276699 bp Feature: gene Location: 4276854-4277300 bp Ori: AMC36580.1 Feature: domain Description: PHA02517 Location: 4276857-4277274 bp Feature: domain Description: PHA0251 7 Location: 4276857-4277274 bp Feature: gene Location: 4277411-4278928 bp Ori: AMC36581.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4277669-4278407 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4277669-4278407 bp Feature: domain Description: GIIM Note: maturase Location: 4278503-4278689 bp Feature: domain Description: GIIM Note: maturase Location: 4278503-4278689 bp Feature: gene Location: 4279578-4280000 bp Ori: AMC36582.1 Feature: domain Description: PHA02517 Location: 4279632-4279980 bp Feature: domain Description: PHA0251 7 Location: 4279632-4279980 bp Feature: gene Location: 4279997-4280317 bp Ori: AMC36583.1 Feature: domain Description: InsE Location: 4280000-4280297 bp Feature: domain Description: InsE Location: 4280000-4280297 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ABC_Iron-Siderophores_B12_Hemin (cd03214), RVT-Retrons, PyocinActivator (pfam11112), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), psd (PRK00044)