myRT

myRT report for GCA_000970185.1_ASM97018v1

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Seq: CP009511.1 Methanosarcina mazei SarPi, complete genome (4066551 bp)
Overview 1 RT 1: 1518968-1521994 bp 2 RT 2: 2710625-2719910 bp Neighborhood of RT #1 [1518968, 1522122] RVT-CRISPR Cas6b_N Cas6b_C DUF1887 DUF1887 Neighborhood of RT #2 [2710625, 2719993] arch_PEF_CTERM COG4584 RVT_N RVT-GII GIIM DnaC PLN02432 para_beta_helix para_beta_helix para_beta_helix para_beta_helix para_beta_helix PLN02432 para_beta_helix para_beta_helix para_beta_helix Feature: gene Location: 1518968-1520092 bp Ori: AKB61219.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1519148-1519772 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 51 91 48-1 51 9772 bp Feature: gene Location: 1520166-1520888 bp Ori: AKB61220.1 Feature: domain Description: Cas6b_N Location: 1520235-1520535 bp Feature: domain Description: Cas6b_N Location: 1 520235-1 520535 bp Feature: domain Description: Cas6b_C Location: 1520547-1520880 bp Feature: domain Description: Cas6b_C Location: 1 520547-1 520880 bp Feature: gene Location: 1520929-1522122 bp Ori: AKB61221.1 Feature: domain Description: DUF1887 Location: 1521070-1521295 bp Feature: domain Description: DUF1 887 Location: 1 521 070-1 521 295 bp Feature: domain Description: DUF1887 Location: 1521694-1521994 bp Feature: domain Description: DUF1 887 Location: 1 521 694-1 521 994 bp Feature: gene Location: 2710625-2710948 bp Ori: AKB62092.1 Feature: domain Description: arch_PEF_CTERM Location: 2710871-2710943 bp Feature: domain Description: arch_PEF_CTERM Location: 271 0871 -271 0943 bp Feature: gene Location: 2711574-2712263 bp Ori: AKB62093.1 Feature: domain Description: COG4584 Location: 2711577-2712144 bp Feature: domain Description: COG4584 Location: 271 1 577-271 21 44 bp Feature: gene Location: 2712551-2714200 bp Ori: AKB62094.1 Feature: domain Description: RVT_N Location: 2712770-2713013 bp Feature: domain Description: RVT_N Location: 271 2770-271 301 3 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2713058-2713715 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 271 3058-271 371 5 bp Feature: domain Description: GIIM Note: maturase Location: 2713769-2714000 bp Feature: domain Description: GIIM Note: maturase Location: 271 3769-271 4000 bp Feature: gene Location: 2714978-2715751 bp Ori: AKB62095.1 Feature: domain Description: DnaC Location: 2714981-2715725 bp Feature: domain Description: DnaC Location: 271 4981 -271 5725 bp Feature: gene Location: 2717696-2719993 bp Ori: AKB62096.1 Feature: domain Description: PLN02432 Location: 2717765-2717945 bp Feature: domain Description: PLN02432 Location: 271 7765-271 7945 bp Feature: domain Description: para_beta_helix Location: 2718041-2718170 bp Feature: domain Description: para_beta_helix Location: 271 8041 -271 81 70 bp Feature: domain Description: para_beta_helix Location: 2718467-2718587 bp Feature: domain Description: para_beta_helix Location: 271 8467-271 8587 bp Feature: domain Description: para_beta_helix Location: 2718596-2718722 bp Feature: domain Description: para_beta_helix Location: 271 8596-271 8722 bp Feature: domain Description: para_beta_helix Location: 2718731-2718860 bp Feature: domain Description: para_beta_helix Location: 271 8731 -271 8860 bp Feature: domain Description: para_beta_helix Location: 2718866-2718980 bp Feature: domain Description: para_beta_helix Location: 271 8866-271 8980 bp Feature: domain Description: PLN02432 Location: 2719211-2719367 bp Feature: domain Description: PLN02432 Location: 271 921 1 -271 9367 bp Feature: domain Description: para_beta_helix Location: 2719505-2719631 bp Feature: domain Description: para_beta_helix Location: 271 9505-271 9631 bp Feature: domain Description: para_beta_helix Location: 2719658-2719775 bp Feature: domain Description: para_beta_helix Location: 271 9658-271 9775 bp Feature: domain Description: para_beta_helix Location: 2719790-2719910 bp Feature: domain Description: para_beta_helix Location: 271 9790-271 991 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas6b_N (pfam17955), Cas6b_C, DUF1887 (pfam09002), arch_PEF_CTERM (TIGR03024), COG4584 (Transposase ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DnaC (COG1484)
PLN02432 (putative pectinesterase), para_beta_helix (TIGR03804)