myRT

myRT report for GCA_000970205.1_ASM97020v1

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Seq: CP009512.1 Methanosarcina mazei S-6, complete genome (4142816 bp)
Overview 1 RT 1: 1625707-1627579 bp 2 RT 2: 2519828-2526871 bp 3 RT 3: 2533421-2538206 bp Neighborhood of RT #1 [1625707, 1628127] RVT-CRISPR GIIM Cas6b_N Cas6b_C Cmr1_III-B Neighborhood of RT #2 [2519828, 2526909] DnaC COG4584 RVT-GII GIIM RVT_N RVT-GII COG4584 COG1244 Neighborhood of RT #3 [2533421, 2538259] DnaC DnaC RVT_N RVT-GII GIIM COG4584 DUF2683 Feature: gene Location: 1625707-1626153 bp Ori: AKB64521.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1625710-1625827 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 62571 0-1 625827 bp Feature: domain Description: GIIM Note: maturase Location: 1625989-1626148 bp Feature: domain Description: GIIM Note: maturase Location: 1 625989-1 6261 48 bp Feature: gene Location: 1626276-1626989 bp Ori: AKB64522.1 Feature: domain Description: Cas6b_N Location: 1626297-1626597 bp Feature: domain Description: Cas6b_N Location: 1 626297-1 626597 bp Feature: domain Description: Cas6b_C Location: 1626609-1626942 bp Feature: domain Description: Cas6b_C Location: 1 626609-1 626942 bp Feature: gene Location: 1627027-1628127 bp Ori: AKB64523.1 Feature: domain Description: Cmr1_III-B Location: 1627042-1627579 bp Feature: domain Description: Cmr1 _III-B Location: 1 627042-1 627579 bp Feature: gene Location: 2519828-2520625 bp Ori: AKB65203.1 Feature: domain Description: DnaC Location: 2519831-2520575 bp Feature: domain Description: DnaC Location: 251 9831 -2520575 bp Feature: gene Location: 2520622-2521371 bp Ori: AKB65204.1 Feature: domain Description: COG4584 Location: 2520691-2520973 bp Feature: domain Description: COG4584 Location: 2520691 -2520973 bp Feature: gene Location: 2521403-2522155 bp Ori: AKB65205.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2521406-2521670 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2521 406-2521 670 bp Feature: domain Description: GIIM Note: maturase Location: 2521724-2521955 bp Feature: domain Description: GIIM Note: maturase Location: 2521 724-2521 955 bp Feature: gene Location: 2522570-2522698 bp Feature: gene Location: 2522968-2523825 bp Ori: AKB65207.1 Feature: domain Description: RVT_N Location: 2523211-2523454 bp Feature: domain Description: RVT_N Location: 252321 1 -2523454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2523499-2523820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2523499-2523820 bp Feature: gene Location: 2524074-2524763 bp Ori: AKB65208.1 Feature: domain Description: COG4584 Location: 2524077-2524644 bp Feature: domain Description: COG4584 Location: 2524077-2524644 bp Feature: gene Location: 2525854-2526909 bp Ori: AKB65209.1 Feature: domain Description: COG1244 Location: 2525947-2526871 bp Feature: domain Description: COG1 244 Location: 2525947-2526871 bp Feature: gene Location: 2533421-2534008 bp Ori: AKB65215.1 Feature: domain Description: DnaC Location: 2533424-2533982 bp Feature: domain Description: DnaC Location: 2533424-2533982 bp Feature: gene Location: 2534005-2534193 bp Ori: AKB65216.1 Feature: domain Description: DnaC Location: 2534008-2534170 bp Feature: domain Description: DnaC Location: 2534008-25341 70 bp Feature: gene Location: 2534971-2536470 bp Ori: AKB65217.1 Feature: domain Description: RVT_N Location: 2535040-2535283 bp Feature: domain Description: RVT_N Location: 2535040-2535283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2535328-2535985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2535328-2535985 bp Feature: domain Description: GIIM Note: maturase Location: 2536039-2536270 bp Feature: domain Description: GIIM Note: maturase Location: 2536039-2536270 bp Feature: gene Location: 2536892-2537581 bp Ori: AKB65218.1 Feature: domain Description: COG4584 Location: 2536895-2537462 bp Feature: domain Description: COG4584 Location: 2536895-2537462 bp Feature: gene Location: 2537987-2538259 bp Ori: AKB65219.1 Feature: domain Description: DUF2683 Location: 2537993-2538206 bp Feature: domain Description: DUF2683 Location: 2537993-2538206 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, GIIM (pfam08388), Cas6b_N (pfam17955), Cas6b_C, Cmr1_III-B (cd09657), DnaC (COG1484), COG4584 (Transposase ), RVT-GII, RVT_N (pfam13655), COG1244 (Uncharacterized Fe-S cluster-containing protein)
DUF2683 (pfam10884)