myRT

myRT report for GCA_000972245.3_ASM97224v3

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Seq: CP015323.1 Bacillus filamentosus strain Hbe603 plasmid pBEH1, complete sequence (95077 bp)
Overview 1 RT 1: 38872-43942 bp 2 RT 2: 57052-64825 bp Neighborhood of RT #1 [38872, 43962] RVT_N RVT-GII GIIM MhpC RimL Neighborhood of RT #2 [57052, 64947] PHA02517 PRK09441 RVT-GII Intron_maturas2 HNHc Rve PlsB Feature: gene Location: 38872-39417 bp Feature: gene Location: 39644-40111 bp Feature: gene Location: 40755-42404 bp Feature: domain Description: RVT_N Location: 40803-41049 bp Feature: domain Description: RVT_N Location: 40803-41 049 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41103-41763 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 1 03-41 763 bp Feature: domain Description: GIIM Note: maturase Location: 41829-42063 bp Feature: domain Description: GIIM Note: maturase Location: 41 829-42063 bp Feature: gene Location: 42520-43308 bp Ori: AWG44900.1 Feature: domain Description: MhpC Location: 42538-43285 bp Feature: domain Description: MhpC Location: 42538-43285 bp Feature: gene Location: 43408-43962 bp Ori: AWG44901.1 Feature: domain Description: RimL Location: 43450-43942 bp Feature: domain Description: RimL Location: 43450-43942 bp Feature: gene Location: 57052-57930 bp Feature: domain Description: PHA02517 Location: 57142-57913 bp Feature: domain Description: PHA0251 7 Location: 571 42-5791 3 bp Feature: gene Location: 58126-59664 bp Ori: AWG44914.1 Feature: domain Description: PRK09441 Location: 58216-59653 bp Feature: domain Description: PRK09441 Location: 5821 6-59653 bp Feature: gene Location: 61517-63325 bp Ori: AWG44915.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61778-62582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 778-62582 bp Feature: domain Description: Intron_maturas2 Location: 62672-62921 bp Feature: domain Description: Intron_maturas2 Location: 62672-62921 bp Feature: domain Description: HNHc Note: nucleases Location: 63119-63284 bp Feature: domain Description: HNHc Note: nucleases Location: 631 1 9-63284 bp Feature: gene Location: 63580-64287 bp Ori: AWG44916.1 Feature: domain Description: Rve Location: 63610-64225 bp Feature: domain Description: Rve Location: 6361 0-64225 bp Feature: gene Location: 64561-64947 bp Ori: AWG44917.1 Feature: domain Description: PlsB Location: 64576-64825 bp Feature: domain Description: PlsB Location: 64576-64825 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), MhpC (COG0596), RimL (COG1670), PHA02517 (putative transposase OrfB; Reviewed), PRK09441 (cytoplasmic alpha-amylase; Reviewed), Intron_maturas2 (pfam01348), HNHc (smart00507), Rve (COG3316)
PlsB (COG2937)

Seq: CP011974.1 Bacillus filamentosus strain Hbe603, complete genome (4865574 bp)
Overview 1 RT 1: 1632004-1637380 bp 2 RT 2: 2763599-2773392 bp Neighborhood of RT #1 [1632004, 1637574] YktD YolD RVT-GII PolY_Pol_V_umuC Neighborhood of RT #2 [2763599, 2773418] COG3752 AP_endonuc_2 RVT-GII Intron_maturas2 HNHc RVT_N RVT-GII GIIM DedA HK_WalK HK_WalK Feature: gene Location: 1632004-1632918 bp Ori: AKO92099.1 Feature: domain Description: YktD Location: 1632010-1632916 bp Feature: domain Description: YktD Location: 1632 010-1632 916 bp Feature: gene Location: 1633062-1633394 bp Ori: AKO92100.1 Feature: domain Description: YolD Location: 1633107-1633386 bp Feature: domain Description: YolD Location: 1633107-1633386 bp Feature: gene Location: 1633537-1635519 bp Ori: AKO92101.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1633858-1634590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1633858-1634590 bp Feature: gene Location: 1635516-1635720 bp Feature: gene Location: 1636309-1637574 bp Ori: AKO92102.1 Feature: domain Description: PolY_Pol_V_umuC Location: 1636345-1637380 bp Feature: domain Description: PolY_Pol_V_umuC Location: 1636345-1637380 bp Feature: gene Location: 2763599-2764288 bp Ori: AKO95094.2 Feature: domain Description: COG3752 Location: 2763902-2764283 bp Feature: domain Description: COG3752 Location: 2 763902 -2 7642 83 bp Feature: gene Location: 2764965-2765876 bp Ori: AKO93036.1 Feature: domain Description: AP_endonuc_2 Location: 2765226-2765625 bp Feature: domain Description: AP_endonuc_2 Location: 2 7652 2 6-2 76562 5 bp Feature: gene Location: 2766207-2768015 bp Ori: AWG44197.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2766468-2767272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 766468-2 7672 72 bp Feature: domain Description: Intron_maturas2 Location: 2767362-2767611 bp Feature: domain Description: Intron_maturas2 Location: 2 767362 -2 767611 bp Feature: domain Description: HNHc Note: nucleases Location: 2767809-2767974 bp Feature: domain Description: HNHc Note: nucleases Location: 2 767809-2 767974 bp Feature: gene Location: 2768649-2770298 bp Ori: AKO93038.1 Feature: domain Description: RVT_N Location: 2768697-2768940 bp Feature: domain Description: RVT_N Location: 2 768697-2 768940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2768997-2769657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 768997-2 769657 bp Feature: domain Description: GIIM Note: maturase Location: 2769723-2769957 bp Feature: domain Description: GIIM Note: maturase Location: 2 76972 3-2 769957 bp Feature: gene Location: 2771335-2771889 bp Ori: AKO93039.1 Feature: domain Description: DedA Location: 2771356-2771878 bp Feature: domain Description: DedA Location: 2 771356-2 771878 bp Feature: gene Location: 2771943-2773418 bp Ori: AKO95095.1 Feature: domain Description: HK_WalK Location: 2771988-2772705 bp Feature: domain Description: HK_WalK Location: 2 771988-2 772 705 bp Feature: domain Description: HK_WalK Location: 2772714-2773392 bp Feature: domain Description: HK_WalK Location: 2 772 714-2 773392 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YktD (COG3315), YolD (pfam08863), RVT-GII, PolY_Pol_V_umuC (cd01700), COG3752 (Steroid 5-alpha reductase family enzyme ), AP_endonuc_2 (pfam01261), Intron_maturas2 (pfam01348), HNHc (smart00507), RVT_N (pfam13655), GIIM (pfam08388)
DedA (COG0586), HK_WalK (NF033092)

Seq: CP015328.1 Bacillus filamentosus strain Hbe603 plasmid pBEH6, complete sequence (69165 bp)
Overview 1 RT 1: 48485-53434 bp Neighborhood of RT #1 [48485, 53502] RVT_N RVT-GII GIIM ISOPREN_C2_like DUF4111 Feature: gene Location: 48485-48865 bp Feature: gene Location: 48865-49086 bp Feature: gene Location: 49376-51025 bp Ori: AWG44341.1 Feature: domain Description: RVT_N Location: 49424-49670 bp Feature: domain Description: RVT_N Location: 49424-49670 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49724-50384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49724-503 84 bp Feature: domain Description: GIIM Note: maturase Location: 50450-50684 bp Feature: domain Description: GIIM Note: maturase Location: 50450-50684 bp Feature: gene Location: 51724-52533 bp Ori: AWG44342.1 Feature: domain Description: ISOPREN_C2_like Location: 51823-52513 bp Feature: domain Description: ISOPREN_C2_like Location: 51823 -52513 bp Feature: gene Location: 52684-53502 bp Ori: AWG44343.1 Feature: domain Description: DUF4111 Location: 53236-53434 bp Feature: domain Description: DUF4111 Location: 53 23 6-53 43 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), ISOPREN_C2_like (cl08267), DUF4111 (pfam13427)