myRT

myRT report for GCA_000988385.1_ASM98838v1

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Seq: CP011321.1 Escherichia coli strain SQ88, complete genome (4610881 bp)
Overview 1 RT 1: 265450-270412 bp Neighborhood of RT #1 [265450, 270414] PHA02517 HTH_38 Tra8 RVT-GII IS5 PRK11387 Feature: gene Location: 265450-265875 bp Gene: insN Feature: domain Description: PHA02517 Location: 265540-265876 bp Feature: domain Description: PHA0251 7 Location: 265540-265876 bp Feature: gene Location: 264289-265440 bp Ori: AKF58346.1 Gene: insI1 Feature: domain Description: HTH_38 Location: 264298-264412 bp Feature: domain Description: HTH_38 Location: 264298-26441 2 bp Feature: domain Description: Tra8 Location: 264448-265429 bp Feature: domain Description: Tra8 Location: 264448-265429 bp Feature: gene Location: 266533-267640 bp Gene: ykfC Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 266806-267538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 266806-267538 bp Feature: gene Location: 267787-268803 bp Ori: AKF58347.1 Gene: insH1 Feature: domain Description: IS5 Location: 268012-268789 bp Feature: domain Description: IS5 Location: 26801 2-268789 bp Feature: gene Location: 269011-270414 bp Ori: AKF58348.1 Gene: mmuP Feature: domain Description: PRK11387 Location: 269017-270412 bp Feature: domain Description: PRK1 1 387 Location: 26901 7-27041 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), HTH_38 (pfam13936), Tra8 (COG2826), RVT-GII, IS5 (COG3039), PRK11387 (S-methylmethionine permease)