myRT

myRT report for GCA_000988565.1_ASM98856v1

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Seq: CP006003.1 Myxococcus fulvus 124B02, complete genome (11048835 bp)
Overview 1 RT 1: 183895-196667 bp 2 RT 2: 4519837-4528209 bp 3 RT 3: 9333050-9342495 bp 4 RT 4: 10338940-10345124 bp Neighborhood of RT #1 [183895, 196735] BetA BetA BetA DAP2 RVT-Retrons Acetyltransf_6 7WD40 7WD40 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 Neighborhood of RT #2 [4519837, 4528209] PRK15030 2A0602 RVT-Retrons PBP2_Thiaminase_I Neighborhood of RT #3 [9333050, 9342495] CHB_HEX_C_1 CHB_HEX_C_1 CHB_HEX_C_1 RVT-GII DDE_Tnp_IS66 DDE_Tnp_IS66 TnpB_IS66 HTH_23 RVT-GII LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C Neighborhood of RT #4 [10338940, 10345189] RVT-Retrons UPF0227 Feature: gene Location: 183895-185421 bp Ori: AKF79066.1 Feature: domain Description: BetA Location: 183901-184405 bp Feature: domain Description: BetA Location: 1 83901 -1 84405 bp Feature: domain Description: BetA Location: 184549-184822 bp Feature: domain Description: BetA Location: 1 84549-1 84822 bp Feature: domain Description: BetA Location: 184990-185401 bp Feature: domain Description: BetA Location: 1 84990-1 85401 bp Feature: gene Location: 185590-186486 bp Ori: AKF79067.1 Feature: domain Description: DAP2 Location: 185722-186292 bp Feature: domain Description: DAP2 Location: 1 85722-1 86292 bp Feature: gene Location: 186493-187953 bp Ori: AKF79068.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 187051-187693 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 87051 -1 87693 bp Feature: gene Location: 188364-190208 bp Ori: AKF79069.1 Feature: domain Description: Acetyltransf_6 Location: 189900-190098 bp Feature: domain Description: Acetyltransf_6 Location: 1 89900-1 90098 bp Feature: gene Location: 190205-196735 bp Ori: AKF79070.1 Feature: domain Description: 7WD40 Location: 190391-190817 bp Feature: domain Description: 7WD40 Location: 1 90391 -1 9081 7 bp Feature: domain Description: 7WD40 Location: 190904-191153 bp Feature: domain Description: 7WD40 Location: 1 90904-1 91 1 53 bp Feature: domain Description: HEAT_2 Location: 191228-191441 bp Feature: domain Description: HEAT_2 Location: 1 91 228-1 91 441 bp Feature: domain Description: HEAT_2 Location: 191483-191702 bp Feature: domain Description: HEAT_2 Location: 1 91 483-1 91 702 bp Feature: domain Description: HEAT_2 Location: 192032-192281 bp Feature: domain Description: HEAT_2 Location: 1 92032-1 92281 bp Feature: domain Description: HEAT_2 Location: 192326-192479 bp Feature: domain Description: HEAT_2 Location: 1 92326-1 92479 bp Feature: domain Description: HEAT_2 Location: 192521-192737 bp Feature: domain Description: HEAT_2 Location: 1 92521 -1 92737 bp Feature: domain Description: HEAT_2 Location: 193193-193370 bp Feature: domain Description: HEAT_2 Location: 1 931 93-1 93370 bp Feature: domain Description: HEAT_2 Location: 194012-194171 bp Feature: domain Description: HEAT_2 Location: 1 9401 2-1 941 71 bp Feature: domain Description: HEAT_2 Location: 194207-194417 bp Feature: domain Description: HEAT_2 Location: 1 94207-1 9441 7 bp Feature: domain Description: HEAT_2 Location: 194564-194804 bp Feature: domain Description: HEAT_2 Location: 1 94564-1 94804 bp Feature: domain Description: HEAT_2 Location: 195395-195641 bp Feature: domain Description: HEAT_2 Location: 1 95395-1 95641 bp Feature: domain Description: HEAT_2 Location: 196148-196379 bp Feature: domain Description: HEAT_2 Location: 1 961 48-1 96379 bp Feature: domain Description: HEAT_2 Location: 196517-196667 bp Feature: domain Description: HEAT_2 Location: 1 9651 7-1 96667 bp Feature: gene Location: 4519837-4520985 bp Ori: AKF85905.1 Feature: domain Description: PRK15030 Location: 4519870-4520923 bp Feature: domain Description: PRK1 5030 Location: 451 9870-4520923 bp Feature: gene Location: 4520998-4524150 bp Ori: AKF81117.1 Feature: domain Description: 2A0602 Location: 4521001-4524118 bp Feature: domain Description: 2A0602 Location: 4521 001 -45241 1 8 bp Feature: gene Location: 4524207-4525541 bp Ori: AKF81118.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4524651-4525305 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4524651 -4525305 bp Feature: gene Location: 4525752-4526930 bp Ori: AKF81119.1 Feature: domain Description: PBP2_Thiaminase_I Location: 4525812-4526910 bp Feature: domain Description: PBP2_Thiaminase_I Location: 452581 2-452691 0 bp Feature: gene Location: 4527055-4528209 bp Feature: gene Location: 9333050-9335563 bp Ori: AKF83581.1 Feature: domain Description: CHB_HEX_C_1 Location: 9333188-9333392 bp Feature: domain Description: CHB_HEX_C_1 Location: 93331 88-9333392 bp Feature: domain Description: CHB_HEX_C_1 Location: 9333458-9333662 bp Feature: domain Description: CHB_HEX_C_1 Location: 9333458-9333662 bp Feature: domain Description: CHB_HEX_C_1 Location: 9333719-9333923 bp Feature: domain Description: CHB_HEX_C_1 Location: 933371 9-9333923 bp Feature: gene Location: 9335762-9335920 bp Feature: gene Location: 9336077-9336958 bp Ori: AKF87008.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9336080-9336566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9336080-9336566 bp Feature: gene Location: 9337069-9337347 bp Ori: AKF87009.1 Feature: domain Description: DDE_Tnp_IS66 Location: 9337072-9337213 bp Feature: domain Description: DDE_Tnp_IS66 Location: 9337072-933721 3 bp Feature: gene Location: 9337341-9338579 bp Ori: AKF87010.1 Feature: domain Description: DDE_Tnp_IS66 Location: 9337863-9338553 bp Feature: domain Description: DDE_Tnp_IS66 Location: 9337863-9338553 bp Feature: gene Location: 9338596-9338976 bp Ori: AKF87011.1 Feature: domain Description: TnpB_IS66 Location: 9338623-9338908 bp Feature: domain Description: TnpB_IS66 Location: 9338623-9338908 bp Feature: gene Location: 9338970-9339362 bp Ori: AKF87012.1 Feature: domain Description: HTH_23 Location: 9339090-9339177 bp Feature: domain Description: HTH_23 Location: 9339090-93391 77 bp Feature: gene Location: 9339439-9339717 bp Ori: AKF87013.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9339547-9339712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9339547-933971 2 bp Feature: gene Location: 9340479-9341957 bp Ori: AKF87014.1 Feature: domain Description: LZ_Tnp_IS66 Location: 9340581-9340746 bp Feature: domain Description: LZ_Tnp_IS66 Location: 9340581 -9340746 bp Feature: domain Description: zf-IS66 Location: 9340782-9340914 bp Feature: domain Description: zf-IS66 Location: 9340782-934091 4 bp Feature: domain Description: DDE_Tnp_IS66 Location: 9340959-9341784 bp Feature: domain Description: DDE_Tnp_IS66 Location: 9340959-9341 784 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 9341805-9341916 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 9341 805-9341 91 6 bp Feature: gene Location: 9342355-9342495 bp Feature: gene Location: 10338940-10340889 bp Feature: gene Location: 10340886-10342514 bp Feature: gene Location: 10342680-10343960 bp Ori: AKF84127.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10343151-10343763 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 03431 51 -1 0343763 bp Feature: gene Location: 10344095-10344445 bp Feature: gene Location: 10344497-10345189 bp Ori: AKF84129.1 Feature: domain Description: UPF0227 Location: 10344542-10345124 bp Feature: domain Description: UPF0227 Location: 1 0344542-1 03451 24 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BetA (COG2303), DAP2 (COG1506), RVT-Retrons, Acetyltransf_6 (pfam13480), 7WD40 (sd00039), HEAT_2 (pfam13646), PRK15030 (multidrug efflux RND transporter periplasmic adaptor subunit AcrA), 2A0602 (TIGR00915), PBP2_Thiaminase_I (cd13524), CHB_HEX_C_1 (pfam13290)
RVT-GII, DDE_Tnp_IS66 (pfam03050), TnpB_IS66 (pfam05717), HTH_23 (pfam13384), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66_C (pfam13817), UPF0227 (pfam05728)