myRT

myRT report for GCA_000993725.1_ASM99372v1

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Seq: CP011365.1 Salmonella enterica subsp. enterica serovar Typhimurium strain FORC_015, complete genome (4759372 bp)
Overview 1 RT 1: 2836012-2838860 bp 2 RT 2: 4475174-4481000 bp Neighborhood of RT #1 [2836012, 2838913] InsE RVT-Retrons HTH_Tnp_1 Neighborhood of RT #2 [4475174, 4481008] groES groEL RVT_N RVT-GII GIIM HNHc DUF2188 DUF4156 Feature: gene Location: 2836012-2836314 bp Ori: AKG31489.1 Feature: domain Description: InsE Location: 2836021-2836303 bp Feature: domain Description: InsE Location: 2836021 -2836303 bp Feature: gene Location: 2836746-2836973 bp Feature: gene Location: 2837004-2837963 bp Ori: AKG31491.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2837184-2837706 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 28371 84-2837706 bp Feature: gene Location: 2838013-2838390 bp Feature: gene Location: 2838647-2838913 bp Ori: AKG31493.1 Feature: domain Description: HTH_Tnp_1 Location: 2838653-2838860 bp Feature: domain Description: HTH_Tnp_1 Location: 2838653-2838860 bp Feature: gene Location: 4475174-4475467 bp Ori: AKG32939.1 Feature: domain Description: groES Location: 4475177-4475462 bp Feature: domain Description: groES Location: 44751 77-4475462 bp Feature: gene Location: 4475511-4477157 bp Ori: AKG32940.1 Feature: domain Description: groEL Location: 4475517-4477143 bp Feature: domain Description: groEL Location: 447551 7-44771 43 bp Feature: gene Location: 4478251-4479924 bp Ori: AKG32941.1 Feature: domain Description: RVT_N Location: 4478314-4478548 bp Feature: domain Description: RVT_N Location: 447831 4-4478548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4478602-4479247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4478602-4479247 bp Feature: domain Description: GIIM Note: maturase Location: 4479301-4479532 bp Feature: domain Description: GIIM Note: maturase Location: 4479301 -4479532 bp Feature: domain Description: HNHc Note: nucleases Location: 4479742-4479898 bp Feature: domain Description: HNHc Note: nucleases Location: 4479742-4479898 bp Feature: gene Location: 4480073-4480300 bp Ori: AKG32942.1 Feature: domain Description: DUF2188 Location: 4480088-4480265 bp Feature: domain Description: DUF21 88 Location: 4480088-4480265 bp Feature: gene Location: 4480655-4481008 bp Ori: AKG32943.1 Feature: domain Description: DUF4156 Location: 4480724-4481000 bp Feature: domain Description: DUF41 56 Location: 4480724-4481 000 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-Retrons, HTH_Tnp_1 (pfam01527), groES (PRK14533), groEL (PRK12852), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF2188 (pfam09954)
DUF4156 (pfam13698)