myRT

myRT report for GCA_000993825.1_ASM99382v1

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Seq: CP011114.1 Paenibacillus durus ATCC 35681, complete genome (5575484 bp)
Overview 1 RT 1: 13061-17238 bp 2 RT 2: 306802-313537 bp 3 RT 3: 2045959-2052211 bp 4 RT 4: 2576436-2583646 bp 5 RT 5: 3362173-3367771 bp 6 RT 6: 4686448-4694881 bp Neighborhood of RT #1 [13061, 17267] RVT-GII GIIM Nitro_FMN_reductase LhgO Neighborhood of RT #2 [306802, 313545] LysR COG3666 DDE_Tnp_1_6 RVT-GII GIIM zf-ISL3 DDE_Tnp_ISL3 THN_reductase-like_SDR_c Neighborhood of RT #3 [2045959, 2052216] FieF RgfB-like RVT-GII GIIM P-type_ATPase_HM_ZosA_PfeT-like CsoR-like_DUF156_1 Neighborhood of RT #4 [2576436, 2583654] ClpP RnjA RVT-GII GIIM DHDPS PRK08210 Neighborhood of RT #5 [3362173, 3367905] HTH_36 RVT-GII GIIM YdfG DUF4096 Neighborhood of RT #6 [4686448, 4695108] HEPN PRK11440 RVT-UG1 nitrilase RMtype1_S_EcoKI_StySPI-TRD2-CR2_like RMtype1_S_EcoKI_StySPI-TRD2-CR2_like HsdM Feature: gene Location: 13061-13840 bp Feature: gene Location: 13885-14418 bp Feature: gene Location: 14590-15882 bp Ori: AKG33202.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14890-15523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4890-1 5523 bp Feature: domain Description: GIIM Note: maturase Location: 15643-15820 bp Feature: domain Description: GIIM Note: maturase Location: 1 5643-1 5820 bp Feature: gene Location: 16031-16603 bp Ori: AKG33203.1 Feature: domain Description: Nitro_FMN_reductase Location: 16052-16481 bp Feature: domain Description: Nitro_FMN_reductase Location: 1 6052-1 6481 bp Feature: gene Location: 17058-17267 bp Ori: AKG33204.1 Feature: domain Description: LhgO Location: 17064-17238 bp Feature: domain Description: LhgO Location: 1 7064-1 7238 bp Feature: gene Location: 306802-307704 bp Ori: AKG33426.1 Feature: domain Description: LysR Location: 306805-307666 bp Feature: domain Description: LysR Location: 306805-307666 bp Feature: gene Location: 307880-309343 bp Ori: AKG33427.1 Feature: domain Description: COG3666 Location: 307889-308354 bp Feature: domain Description: COG3666 Location: 307889-308354 bp Feature: domain Description: DDE_Tnp_1_6 Location: 308897-309248 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 308897-309248 bp Feature: gene Location: 309493-310785 bp Ori: AKG33428.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 309793-310426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 309793-31 0426 bp Feature: domain Description: GIIM Note: maturase Location: 310546-310723 bp Feature: domain Description: GIIM Note: maturase Location: 31 0546-31 0723 bp Feature: gene Location: 311387-312628 bp Ori: AKG33429.1 Feature: domain Description: zf-ISL3 Location: 311504-311642 bp Feature: domain Description: zf-ISL3 Location: 31 1 504-31 1 642 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 311879-312587 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 31 1 879-31 2587 bp Feature: gene Location: 312763-313545 bp Ori: AKG33430.1 Feature: domain Description: THN_reductase-like_SDR_c Location: 312790-313537 bp Feature: domain Description: THN_reductase-like_SDR_c Location: 31 2790-31 3537 bp Feature: gene Location: 2045959-2046846 bp Ori: AKG37682.1 Feature: domain Description: FieF Location: 2045977-2046838 bp Feature: domain Description: FieF Location: 2045977-2046838 bp Feature: gene Location: 2046883-2047701 bp Ori: AKG34746.1 Feature: domain Description: RgfB-like Location: 2046892-2047699 bp Feature: domain Description: RgfB-like Location: 2046892-2047699 bp Feature: gene Location: 2048296-2049588 bp Ori: AKG34747.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2048596-2049229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2048596-2049229 bp Feature: domain Description: GIIM Note: maturase Location: 2049349-2049526 bp Feature: domain Description: GIIM Note: maturase Location: 2049349-2049526 bp Feature: gene Location: 2049826-2051724 bp Ori: AKG37683.1 Feature: domain Description: P-type_ATPase_HM_ZosA_PfeT-like Location: 2049892-2051719 bp Feature: domain Description: P-type_ATPase_HM_ZosA_PfeT-like Location: 2049892-2051 71 9 bp Feature: gene Location: 2051917-2052216 bp Ori: AKG34748.1 Feature: domain Description: CsoR-like_DUF156_1 Location: 2051968-2052211 bp Feature: domain Description: CsoR-like_DUF1 56_1 Location: 2051 968-205221 1 bp Feature: gene Location: 2576436-2577215 bp Ori: AKG35161.1 Feature: domain Description: ClpP Location: 2576601-2577159 bp Feature: domain Description: ClpP Location: 2576601 -25771 59 bp Feature: gene Location: 2577404-2579083 bp Ori: AKG35162.1 Feature: domain Description: RnjA Location: 2577413-2579075 bp Feature: domain Description: RnjA Location: 257741 3-2579075 bp Feature: gene Location: 2579649-2580941 bp Ori: AKG35163.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2579949-2580582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2579949-2580582 bp Feature: domain Description: GIIM Note: maturase Location: 2580702-2580879 bp Feature: domain Description: GIIM Note: maturase Location: 2580702-2580879 bp Feature: gene Location: 2581543-2582418 bp Ori: AKG35164.1 Feature: domain Description: DHDPS Location: 2581552-2582407 bp Feature: domain Description: DHDPS Location: 2581 552-2582407 bp Feature: gene Location: 2582434-2583654 bp Ori: AKG35165.1 Feature: domain Description: PRK08210 Location: 2582437-2583646 bp Feature: domain Description: PRK0821 0 Location: 2582437-2583646 bp Feature: gene Location: 3362173-3362352 bp Feature: gene Location: 3362890-3363144 bp Ori: AKG37796.1 Feature: domain Description: HTH_36 Location: 3362920-3363076 bp Feature: domain Description: HTH_36 Location: 3362920-3363076 bp Feature: gene Location: 3363262-3364554 bp Ori: AKG35813.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3363562-3364195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3363562-33641 95 bp Feature: domain Description: GIIM Note: maturase Location: 3364315-3364492 bp Feature: domain Description: GIIM Note: maturase Location: 336431 5-3364492 bp Feature: gene Location: 3366080-3366820 bp Ori: AKG35814.1 Feature: domain Description: YdfG Location: 3366083-3366812 bp Feature: domain Description: YdfG Location: 3366083-336681 2 bp Feature: gene Location: 3367531-3367905 bp Ori: AKG35815.1 Feature: domain Description: DUF4096 Location: 3367552-3367771 bp Feature: domain Description: DUF4096 Location: 3367552-3367771 bp Feature: gene Location: 4686448-4686846 bp Ori: AKG36833.1 Feature: domain Description: HEPN Location: 4686493-4686820 bp Feature: domain Description: HEPN Location: 4686493-4686820 bp Feature: gene Location: 4687111-4687701 bp Ori: AKG36834.1 Feature: domain Description: PRK11440 Location: 4687141-4687669 bp Feature: domain Description: PRK1 1 440 Location: 46871 41 -4687669 bp Feature: gene Location: 4688209-4692108 bp Ori: AKG36835.1 Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 4688851-4689388 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 4688851 -4689388 bp Feature: domain Description: nitrilase Location: 4691389-4692055 bp Feature: domain Description: nitrilase Location: 4691 389-4692055 bp Feature: gene Location: 4692194-4693609 bp Ori: AKG36836.1 Feature: domain Description: RMtype1_S_EcoKI_StySPI-TRD2-CR2_like Location: 4692287-4692821 bp Feature: domain Description: RMtype1 _S_EcoKI_StySPI-TRD2-CR2_like Location: 4692287-4692821 bp Feature: domain Description: RMtype1_S_EcoKI_StySPI-TRD2-CR2_like Location: 4692959-4693520 bp Feature: domain Description: RMtype1 _S_EcoKI_StySPI-TRD2-CR2_like Location: 4692959-4693520 bp Feature: gene Location: 4693606-4695108 bp Ori: AKG36837.1 Feature: domain Description: HsdM Location: 4693615-4694881 bp Feature: domain Description: HsdM Location: 469361 5-4694881 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Nitro_FMN_reductase (cl00514), LhgO (COG0579), LysR (COG0583), COG3666 (Transposase ), DDE_Tnp_1_6 (pfam13751), zf-ISL3 (pfam14690), DDE_Tnp_ISL3 (pfam01610), THN_reductase-like_SDR_c (cd05362)
FieF (COG0053), RgfB-like (cd09079), P-type_ATPase_HM_ZosA_PfeT-like (cd07551), CsoR-like_DUF156_1 (cd10158), ClpP (COG0740), RnjA (COG0595), DHDPS (pfam00701), PRK08210 (aspartate kinase I; Reviewed), HTH_36 (pfam13730), YdfG (COG4221)
DUF4096 (pfam13340), HEPN (smart00748), PRK11440 (putative hydrolase; Provisional), RVT-UG1, nitrilase (cl11424), RMtype1_S_EcoKI_StySPI-TRD2-CR2_like (cd17517), HsdM (COG0286)