myRT

myRT report for GCA_001010805.1_ASM101080v1

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Seq: CP011477.1 Spongiibacter sp. IMCC21906, complete genome (3468984 bp)
Overview 1 RT 1: 92334-97650 bp 2 RT 2: 2165394-2172198 bp Neighborhood of RT #1 [92334, 97655] DUF1851 COG3791 RVT-GII GIIM zf-ribbon_3 ligand_gated_channel Neighborhood of RT #2 [2165394, 2172239] Phage_integrase RVT-UG3 RVT-UG8 DNA_BRE_C xerC Feature: gene Location: 92334-92807 bp Ori: AKH67780.1 Feature: domain Description: DUF1851 Location: 92532-92751 bp Feature: domain Description: DUF1 851 Location: 92532-92751 bp Feature: gene Location: 93368-93793 bp Ori: AKH67781.1 Feature: domain Description: COG3791 Location: 93377-93752 bp Feature: domain Description: COG3791 Location: 93377-93752 bp Feature: gene Location: 93865-94407 bp Ori: AKH67782.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93871-93973 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93871 -93973 bp Feature: domain Description: GIIM Note: maturase Location: 94018-94228 bp Feature: domain Description: GIIM Note: maturase Location: 9401 8-94228 bp Feature: gene Location: 94821-95036 bp Ori: AKH67783.1 Feature: domain Description: zf-ribbon_3 Location: 94848-94914 bp Feature: domain Description: zf-ribbon_3 Location: 94848-9491 4 bp Feature: gene Location: 95562-97655 bp Ori: AKH67784.1 Feature: domain Description: ligand_gated_channel Location: 95715-97650 bp Feature: domain Description: ligand_gated_channel Location: 9571 5-97650 bp Feature: gene Location: 2165394-2166131 bp Ori: AKH69686.1 Feature: domain Description: Phage_integrase Location: 2165574-2166087 bp Feature: domain Description: Phage_integrase Location: 21 65574-21 66087 bp Feature: gene Location: 2166131-2166262 bp Feature: gene Location: 2166366-2167712 bp Ori: AKH69688.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 2166816-2167296 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 21 6681 6-21 67296 bp Feature: gene Location: 2167705-2169777 bp Ori: AKH69689.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2168323-2168776 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 21 68323-21 68776 bp Feature: gene Location: 2170106-2170777 bp Ori: AKH69690.1 Feature: domain Description: DNA_BRE_C Location: 2170118-2170727 bp Feature: domain Description: DNA_BRE_C Location: 21 701 1 8-21 70727 bp Feature: gene Location: 2170998-2172239 bp Ori: AKH69691.1 Feature: domain Description: xerC Location: 2171148-2172198 bp Feature: domain Description: xerC Location: 21 71 1 48-21 721 98 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1851 (pfam08906), COG3791 (Uncharacterized conserved protein ), RVT-GII, GIIM (pfam08388), zf-ribbon_3 (pfam13248), ligand_gated_channel (cd01347), Phage_integrase (pfam00589), RVT-UG3, RVT-UG8, DNA_BRE_C (cl00213)
xerC (PRK01287)