myRT

myRT report for GCA_001017635.1_ASM101763v1

Download annotations/find similar RTs

Seq: CP011351.1 Bacillus thuringiensis strain YC-10 plasmid pYC3, complete sequence (80704 bp)
Overview 1 RT 1: 9562-16144 bp Neighborhood of RT #1 [9562, 16233] DUF5513 RVT-GII HNHc Lysozyme_like VirB4_CagE Feature: gene Location: 9562-9837 bp Ori: AKJ62936.1 Feature: domain Description: DUF5513 Location: 9565-9835 bp Feature: domain Description: DUF551 3 Location: 9565-9835 bp Feature: gene Location: 9926-10534 bp Feature: gene Location: 11432-13237 bp Ori: AKJ62938.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11726-12422 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 726-1 2422 bp Feature: domain Description: HNHc Note: nucleases Location: 12983-13121 bp Feature: domain Description: HNHc Note: nucleases Location: 1 2983-1 31 21 bp Feature: gene Location: 13911-14297 bp Ori: AKJ62939.1 Feature: domain Description: Lysozyme_like Location: 14130-14277 bp Feature: domain Description: Lysozyme_like Location: 1 41 30-1 4277 bp Feature: gene Location: 14299-16233 bp Ori: AKJ62940.1 Feature: domain Description: VirB4_CagE Location: 14629-16144 bp Feature: domain Description: VirB4_CagE Location: 1 4629-1 61 44 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5513 (pfam17632), RVT-GII, HNHc (smart00507), Lysozyme_like (pfam13702), VirB4_CagE (TIGR00929)

Seq: CP011350.1 Bacillus thuringiensis strain YC-10 plasmid pYC1, complete sequence (761374 bp)
Overview 1 RT 1: 9220-19571 bp 2 RT 2: 69197-80749 bp 3 RT 3: 96249-101857 bp 4 RT 4: 270301-283537 bp 5 RT 5: 427043-431016 bp 6 RT 6: 457245-462996 bp 7 RT 7: 469000-484173 bp 8 RT 8: 540618-546568 bp 9 RT 9: 689529-693889 bp 10 RT 10: 740758-750538 bp Neighborhood of RT #1 [9220, 19591] RVT-GII GIIM RVT-GII HNHc RVT-GII Intron_maturas2 HNHc COG4584 PRK09183 Neighborhood of RT #2 [69197, 80772] CwlT_like RVT-GII HNHc RVT-GII HNHc CwlT_like RVT-GII Intron_maturas2 HNHc YdiL Neighborhood of RT #3 [96249, 101865] metallo-hydrolase-like_MBL-fold RVT-GII GIIM Rve Neighborhood of RT #4 [270301, 283578] LbH_MAT_like RVT-GII GIIM AE_Prim_S_like RVT-UG10 PRK13922 RapH_N TPR TPR Neighborhood of RT #5 [427043, 431016] RVT-GII Intron_maturas2 HNHc Neighborhood of RT #6 [457245, 463025] RVT-GII HNHc LPD1 DUF3854 Neighborhood of RT #7 [469000, 484173] TrbL CwlT_like RVT-GII HNHc CwlT_like RVT-GII HNHc CwlT_like RVT-GII Intron_maturas2 HNHc Neighborhood of RT #8 [540618, 546576] RhaT RVT-GII GIIM ADPrib_exo_Tox Neighborhood of RT #9 [689529, 694455] RVT-GII GIIM AdoMet_MTases Neighborhood of RT #10 [740758, 750538] RVT-GII GIIM HNHc RVT-GII HNHc RVT-GII Intron_maturas2 HNHc Feature: gene Location: 9220-11094 bp Ori: AKJ62347.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9520-10225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 952 0-102 2 5 bp Feature: domain Description: GIIM Note: maturase Location: 10339-10507 bp Feature: domain Description: GIIM Note: maturase Location: 10339-10507 bp Feature: gene Location: 11766-12203 bp Feature: gene Location: 12269-14059 bp Ori: AKJ62349.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12566-13262 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 566-132 62 bp Feature: domain Description: HNHc Note: nucleases Location: 13802-13934 bp Feature: domain Description: HNHc Note: nucleases Location: 13802 -13934 bp Feature: gene Location: 15026-16849 bp Ori: AKJ62350.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15296-16124 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 152 96-1612 4 bp Feature: domain Description: Intron_maturas2 Location: 16196-16514 bp Feature: domain Description: Intron_maturas2 Location: 16196-16514 bp Feature: domain Description: HNHc Note: nucleases Location: 16667-16820 bp Feature: domain Description: HNHc Note: nucleases Location: 16667-1682 0 bp Feature: gene Location: 17554-18849 bp Ori: AKJ62351.1 Feature: domain Description: COG4584 Location: 17968-18358 bp Feature: domain Description: COG4584 Location: 17968-18358 bp Feature: gene Location: 18839-19591 bp Ori: AKJ62352.1 Feature: domain Description: PRK09183 Location: 18845-19571 bp Feature: domain Description: PRK09183 Location: 18845-19571 bp Feature: gene Location: 69197-70195 bp Ori: AKJ62390.1 Feature: domain Description: CwlT_like Location: 70049-70169 bp Feature: domain Description: CwlT_like Location: 70049-70169 bp Feature: gene Location: 70869-72674 bp Ori: AKJ62391.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71163-71859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71163-71859 bp Feature: domain Description: HNHc Note: nucleases Location: 72420-72558 bp Feature: domain Description: HNHc Note: nucleases Location: 72 42 0-72 558 bp Feature: gene Location: 73730-75526 bp Ori: AKJ62392.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73988-74693 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73988-74693 bp Feature: domain Description: HNHc Note: nucleases Location: 75254-75389 bp Feature: domain Description: HNHc Note: nucleases Location: 752 54-75389 bp Feature: gene Location: 75595-75786 bp Ori: AKJ62393.1 Feature: domain Description: CwlT_like Location: 75622-75775 bp Feature: domain Description: CwlT_like Location: 7562 2 -75775 bp Feature: gene Location: 76362-78185 bp Ori: AKJ62394.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76626-77460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7662 6-77460 bp Feature: domain Description: Intron_maturas2 Location: 77529-77868 bp Feature: domain Description: Intron_maturas2 Location: 7752 9-77868 bp Feature: domain Description: HNHc Note: nucleases Location: 78006-78162 bp Feature: domain Description: HNHc Note: nucleases Location: 78006-78162 bp Feature: gene Location: 79230-79805 bp Feature: gene Location: 80083-80772 bp Ori: AKJ62396.1 Feature: domain Description: YdiL Location: 80107-80749 bp Feature: domain Description: YdiL Location: 80107-80749 bp Feature: gene Location: 96249-97169 bp Ori: AKJ62414.1 Feature: domain Description: metallo-hydrolase-like_MBL-fold Location: 96303-97005 bp Feature: domain Description: metallo-hydrolase-like_MBL-fold Location: 96303-97005 bp Feature: gene Location: 98518-98697 bp Feature: gene Location: 98871-100178 bp Ori: AKJ62416.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99156-99795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99156-99795 bp Feature: domain Description: GIIM Note: maturase Location: 99870-100095 bp Feature: domain Description: GIIM Note: maturase Location: 99870-100095 bp Feature: gene Location: 100512-100958 bp Feature: gene Location: 101266-101865 bp Ori: AKJ62418.1 Feature: domain Description: Rve Location: 101269-101857 bp Feature: domain Description: Rve Location: 1012 69-101857 bp Feature: gene Location: 270301-270867 bp Ori: AKJ62521.1 Feature: domain Description: LbH_MAT_like Location: 270409-270805 bp Feature: domain Description: LbH_MAT_like Location: 2 70409-2 70805 bp Feature: gene Location: 271007-271318 bp Feature: gene Location: 271543-272850 bp Ori: AKJ62523.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 271828-272467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 7182 8-2 72 467 bp Feature: domain Description: GIIM Note: maturase Location: 272542-272767 bp Feature: domain Description: GIIM Note: maturase Location: 2 72 542 -2 72 767 bp Feature: gene Location: 273024-273203 bp Feature: gene Location: 274391-275008 bp Feature: gene Location: 275018-275443 bp Feature: gene Location: 275882-281521 bp Ori: AKJ62527.1 Feature: domain Description: AE_Prim_S_like Location: 276092-276311 bp Feature: domain Description: AE_Prim_S_like Location: 2 76092 -2 76311 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 277298-277952 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 2 772 98-2 77952 bp Feature: gene Location: 281797-282009 bp Ori: AKJ62528.1 Feature: domain Description: PRK13922 Location: 281869-281989 bp Feature: domain Description: PRK1392 2 Location: 2 81869-2 81989 bp Feature: gene Location: 282487-283578 bp Ori: AKJ62529.1 Feature: domain Description: RapH_N Location: 282508-282679 bp Feature: domain Description: RapH_N Location: 2 82 508-2 82 679 bp Feature: domain Description: TPR Location: 282814-283081 bp Feature: domain Description: TPR Location: 2 82 814-2 83081 bp Feature: domain Description: TPR Location: 283126-283537 bp Feature: domain Description: TPR Location: 2 8312 6-2 83537 bp Feature: gene Location: 427043-428866 bp Ori: AKJ62642.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 427313-428141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 7313-42 8141 bp Feature: domain Description: Intron_maturas2 Location: 428213-428531 bp Feature: domain Description: Intron_maturas2 Location: 42 82 13-42 8531 bp Feature: domain Description: HNHc Note: nucleases Location: 428684-428837 bp Feature: domain Description: HNHc Note: nucleases Location: 42 8684-42 8837 bp Feature: gene Location: 429467-430612 bp Feature: gene Location: 430630-431016 bp Feature: gene Location: 457245-458336 bp Feature: gene Location: 458771-459025 bp Feature: gene Location: 459057-460853 bp Ori: AKJ62672.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 459351-460047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 459351-460047 bp Feature: domain Description: HNHc Note: nucleases Location: 460647-460722 bp Feature: domain Description: HNHc Note: nucleases Location: 460647-46072 2 bp Feature: gene Location: 460925-461722 bp Ori: AKJ62673.1 Feature: domain Description: LPD1 Location: 461471-461666 bp Feature: domain Description: LPD1 Location: 461471-461666 bp Feature: gene Location: 461712-463025 bp Ori: AKJ62674.1 Feature: domain Description: DUF3854 Location: 462657-462996 bp Feature: domain Description: DUF3854 Location: 462 657-462 996 bp Feature: gene Location: 469000-473019 bp Ori: AKJ62683.1 Feature: domain Description: TrbL Location: 469279-469777 bp Feature: domain Description: TrbL Location: 4692 79-469777 bp Feature: gene Location: 473016-474011 bp Ori: AKJ62684.1 Feature: domain Description: CwlT_like Location: 473865-473988 bp Feature: domain Description: CwlT_like Location: 473865-473988 bp Feature: gene Location: 474685-476490 bp Ori: AKJ62685.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 474979-475675 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 474979-475675 bp Feature: domain Description: HNHc Note: nucleases Location: 476236-476374 bp Feature: domain Description: HNHc Note: nucleases Location: 4762 36-476374 bp Feature: gene Location: 476606-476773 bp Ori: AKJ62686.1 Feature: domain Description: CwlT_like Location: 476648-476756 bp Feature: domain Description: CwlT_like Location: 476648-476756 bp Feature: gene Location: 477546-479342 bp Ori: AKJ62687.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 477804-478509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 477804-478509 bp Feature: domain Description: HNHc Note: nucleases Location: 479070-479205 bp Feature: domain Description: HNHc Note: nucleases Location: 479070-4792 05 bp Feature: gene Location: 479411-479602 bp Ori: AKJ62688.1 Feature: domain Description: CwlT_like Location: 479438-479594 bp Feature: domain Description: CwlT_like Location: 479438-479594 bp Feature: gene Location: 480178-482001 bp Ori: AKJ62689.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 480442-481276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 480442 -4812 76 bp Feature: domain Description: Intron_maturas2 Location: 481345-481684 bp Feature: domain Description: Intron_maturas2 Location: 481345-481684 bp Feature: domain Description: HNHc Note: nucleases Location: 481822-481978 bp Feature: domain Description: HNHc Note: nucleases Location: 48182 2 -481978 bp Feature: gene Location: 483053-483628 bp Feature: gene Location: 483790-484173 bp Feature: gene Location: 540618-541007 bp Feature: gene Location: 541153-542025 bp Ori: AKJ62746.1 Feature: domain Description: RhaT Location: 541180-542014 bp Feature: domain Description: RhaT Location: 541180-542 014 bp Feature: gene Location: 543019-544326 bp Ori: AKJ62747.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 543304-543943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 543304-543943 bp Feature: domain Description: GIIM Note: maturase Location: 544018-544243 bp Feature: domain Description: GIIM Note: maturase Location: 544018-5442 43 bp Feature: gene Location: 544500-544679 bp Feature: gene Location: 546265-546576 bp Ori: AKJ62749.1 Feature: domain Description: ADPrib_exo_Tox Location: 546286-546568 bp Feature: domain Description: ADPrib_exo_Tox Location: 5462 86-546568 bp Feature: gene Location: 689529-691394 bp Ori: AKJ62846.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 689829-690534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68982 9-690534 bp Feature: domain Description: GIIM Note: maturase Location: 690621-690804 bp Feature: domain Description: GIIM Note: maturase Location: 69062 1-690804 bp Feature: gene Location: 693121-693348 bp Feature: gene Location: 693364-694455 bp Ori: AKJ62848.1 Feature: domain Description: AdoMet_MTases Location: 693475-693889 bp Feature: domain Description: AdoMet_MTases Location: 693475-693889 bp Feature: gene Location: 740758-742632 bp Ori: AKJ62887.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 741058-741763 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 741058-741763 bp Feature: domain Description: GIIM Note: maturase Location: 741877-742045 bp Feature: domain Description: GIIM Note: maturase Location: 741877-742 045 bp Feature: domain Description: HNHc Note: nucleases Location: 742393-742558 bp Feature: domain Description: HNHc Note: nucleases Location: 742 393-742 558 bp Feature: gene Location: 743305-743742 bp Feature: gene Location: 743808-745598 bp Ori: AKJ62889.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 744105-744801 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 744105-744801 bp Feature: domain Description: HNHc Note: nucleases Location: 745341-745473 bp Feature: domain Description: HNHc Note: nucleases Location: 745341-745473 bp Feature: gene Location: 746565-748388 bp Ori: AKJ62890.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 746835-747663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 746835-747663 bp Feature: domain Description: Intron_maturas2 Location: 747735-748053 bp Feature: domain Description: Intron_maturas2 Location: 747735-748053 bp Feature: domain Description: HNHc Note: nucleases Location: 748206-748359 bp Feature: domain Description: HNHc Note: nucleases Location: 7482 06-748359 bp Feature: gene Location: 748989-750134 bp Feature: gene Location: 750152-750538 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507), Intron_maturas2 (pfam01348), COG4584 (Transposase ), PRK09183 (transposase/IS protein; Provisional), CwlT_like, YdiL (COG1266), metallo-hydrolase-like_MBL-fold (cl23716), Rve (COG3316)
LbH_MAT_like (cd04647), AE_Prim_S_like (cl01287), RVT-UG10, PRK13922 (rod shape-determining protein MreC; Provisional), RapH_N (pfam18801), TPR (smart00028), LPD1 (pfam18796), DUF3854 (pfam12965), TrbL (pfam04610), RhaT (TIGR00776)
ADPrib_exo_Tox (pfam03496), AdoMet_MTases (cl17173)

Seq: CP011349.1 Bacillus thuringiensis strain YC-10, complete genome (5675007 bp)
Overview 1 RT 1: 130934-137632 bp 2 RT 2: 601774-605933 bp 3 RT 3: 666962-671522 bp 4 RT 4: 1684709-1688089 bp 5 RT 5: 2073813-2079103 bp 6 RT 6: 2569293-2572920 bp 7 RT 7: 2820685-2826176 bp 8 RT 8: 2946164-2948719 bp 9 RT 9: 3216392-3221602 bp 10 RT 10: 3259009-3264421 bp 11 RT 11: 4437624-4445665 bp 12 RT 12: 4640536-4647511 bp 13 RT 13: 4817951-4824105 bp 14 RT 14: 5148346-5154669 bp 15 RT 15: 5161895-5168793 bp 16 RT 16: 5353965-5359536 bp Neighborhood of RT #1 [130934, 137643] MgtE RimL RVT-GII Intron_maturas2 HNHc Lysozyme_like YxeA Neighborhood of RT #2 [601774, 605933] RVT-GII GIIM Neighborhood of RT #3 [666962, 671522] CC3_like_SDR_a RVT-GII GIIM Neighborhood of RT #4 [1684709, 1688103] RVT-GII GIIM DDE_Tnp_1 Neighborhood of RT #5 [2073813, 2079105] VOC_Bs_YwkD_like RVT-GII GIIM NupC Neighborhood of RT #6 [2569293, 2572920] DppC RVT-GII GIIM Neighborhood of RT #7 [2820685, 2826367] SrmB RVT-GII GIIM DUF1836 Neighborhood of RT #8 [2946164, 2948757] RVT-GII GIIM UvdE Neighborhood of RT #9 [3216392, 3221602] CBM_4_9 CBM_4_9 RVT-GII GIIM Neighborhood of RT #10 [3259009, 3264423] NupC RVT-GII HNHc NupC NupC Neighborhood of RT #11 [4437624, 4445688] rnc SMC_prok_B RVT-GII HNHc SMC_prok_B PRK10416 Neighborhood of RT #12 [4640536, 4647549] CdnL FadH RVT-GII HNHc GltS_FMN DUF1453 Neighborhood of RT #13 [4817951, 4824236] RVT-GII GIIM DUF1796 Neighborhood of RT #14 [5148346, 5154704] RVT-GII GIIM WcaG Neighborhood of RT #15 [5161895, 5168873] OmpR RVT-GII HNHc Uup Uup Acetyltransf_3 Neighborhood of RT #16 [5353965, 5359541] HTH_ARAC RVT-GII GIIM PRK06914 Feature: gene Location: 130934-132262 bp Ori: AKJ56881.1 Feature: domain Description: MgtE Location: 130949-132254 bp Feature: domain Description: MgtE Location: 13 0949-13 2254 bp Feature: gene Location: 132897-133403 bp Ori: AKJ56882.1 Feature: domain Description: RimL Location: 132906-133401 bp Feature: domain Description: RimL Location: 13 2906-13 3 401 bp Feature: gene Location: 133900-135723 bp Ori: AKJ56883.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 134164-134998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 4164-13 4998 bp Feature: domain Description: Intron_maturas2 Location: 135067-135406 bp Feature: domain Description: Intron_maturas2 Location: 13 5067-13 5406 bp Feature: domain Description: HNHc Note: nucleases Location: 135544-135700 bp Feature: domain Description: HNHc Note: nucleases Location: 13 5544-13 5700 bp Feature: gene Location: 136299-136880 bp Ori: AKJ56884.1 Feature: domain Description: Lysozyme_like Location: 136434-136869 bp Feature: domain Description: Lysozyme_like Location: 13 643 4-13 6869 bp Feature: gene Location: 137296-137643 bp Ori: AKJ56885.1 Feature: domain Description: YxeA Location: 137326-137632 bp Feature: domain Description: YxeA Location: 13 73 26-13 763 2 bp Feature: gene Location: 601774-601959 bp Feature: gene Location: 602045-602356 bp Feature: gene Location: 602581-603888 bp Ori: AKJ57282.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 602866-603505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 602866-603 505 bp Feature: domain Description: GIIM Note: maturase Location: 603580-603805 bp Feature: domain Description: GIIM Note: maturase Location: 603 580-603 805 bp Feature: gene Location: 604062-604241 bp Feature: gene Location: 605616-605933 bp Feature: gene Location: 666962-667621 bp Ori: AKJ57360.1 Feature: domain Description: CC3_like_SDR_a Location: 666977-667607 bp Feature: domain Description: CC3 _like_SDR_a Location: 666977-667607 bp Feature: gene Location: 667917-668228 bp Feature: gene Location: 668453-669760 bp Ori: AKJ57362.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 668738-669377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66873 8-6693 77 bp Feature: domain Description: GIIM Note: maturase Location: 669452-669677 bp Feature: domain Description: GIIM Note: maturase Location: 669452-669677 bp Feature: gene Location: 669934-670113 bp Feature: gene Location: 671301-671522 bp Feature: gene Location: 1684709-1685095 bp Feature: gene Location: 1685402-1685659 bp Feature: gene Location: 1685935-1687242 bp Ori: AKJ58380.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1686220-1686859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1686220-1686859 bp Feature: domain Description: GIIM Note: maturase Location: 1686934-1687159 bp Feature: domain Description: GIIM Note: maturase Location: 168693 4-1687159 bp Feature: gene Location: 1687416-1687595 bp Feature: gene Location: 1687747-1688103 bp Ori: AKJ58382.1 Feature: domain Description: DDE_Tnp_1 Location: 1687903-1688089 bp Feature: domain Description: DDE_Tnp_1 Location: 1687903 -1688089 bp Feature: gene Location: 2073813-2074199 bp Ori: AKJ58764.1 Feature: domain Description: VOC_Bs_YwkD_like Location: 2073828-2074194 bp Feature: domain Description: VOC_Bs_YwkD_like Location: 2073 828-2074194 bp Feature: gene Location: 2074419-2074730 bp Feature: gene Location: 2074955-2076262 bp Ori: AKJ58766.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2075240-2075879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2075240-2075879 bp Feature: domain Description: GIIM Note: maturase Location: 2075954-2076179 bp Feature: domain Description: GIIM Note: maturase Location: 2075954-2076179 bp Feature: gene Location: 2076436-2076615 bp Feature: gene Location: 2077927-2079105 bp Ori: AKJ58768.1 Feature: domain Description: NupC Location: 2077930-2079103 bp Feature: domain Description: NupC Location: 207793 0-2079103 bp Feature: gene Location: 2569293-2570213 bp Ori: AKJ59198.1 Feature: domain Description: DppC Location: 2569350-2570208 bp Feature: domain Description: DppC Location: 25693 50-2570208 bp Feature: gene Location: 2570724-2571035 bp Feature: gene Location: 2571260-2572567 bp Ori: AKJ59200.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2571545-2572184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2571545-2572184 bp Feature: domain Description: GIIM Note: maturase Location: 2572259-2572484 bp Feature: domain Description: GIIM Note: maturase Location: 2572259-2572484 bp Feature: gene Location: 2572741-2572920 bp Feature: gene Location: 2820685-2821113 bp Ori: AKJ59431.1 Feature: domain Description: SrmB Location: 2820691-2821003 bp Feature: domain Description: SrmB Location: 2820691-2821003 bp Feature: gene Location: 2822301-2822480 bp Feature: gene Location: 2822654-2823961 bp Ori: AKJ59433.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2822939-2823578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 282293 9-2823 578 bp Feature: domain Description: GIIM Note: maturase Location: 2823653-2823878 bp Feature: domain Description: GIIM Note: maturase Location: 2823 653 -2823 878 bp Feature: gene Location: 2824237-2824497 bp Feature: gene Location: 2825807-2826367 bp Ori: AKJ59435.1 Feature: domain Description: DUF1836 Location: 2825861-2826176 bp Feature: domain Description: DUF183 6 Location: 2825861-2826176 bp Feature: gene Location: 2946164-2946343 bp Feature: gene Location: 2946517-2947824 bp Ori: AKJ59538.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2946802-2947441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2946802-2947441 bp Feature: domain Description: GIIM Note: maturase Location: 2947516-2947741 bp Feature: domain Description: GIIM Note: maturase Location: 2947516-2947741 bp Feature: gene Location: 2948100-2948360 bp Feature: gene Location: 2948443-2948757 bp Ori: AKJ62245.1 Feature: domain Description: UvdE Location: 2948458-2948719 bp Feature: domain Description: UvdE Location: 2948458-2948719 bp Feature: gene Location: 3216392-3217324 bp Ori: AKJ59803.1 Feature: domain Description: CBM_4_9 Location: 3216494-3216836 bp Feature: domain Description: CBM_4_9 Location: 3 216494-3 21683 6 bp Feature: domain Description: CBM_4_9 Location: 3216911-3217268 bp Feature: domain Description: CBM_4_9 Location: 3 216911-3 217268 bp Feature: gene Location: 3218878-3219057 bp Feature: gene Location: 3219231-3220538 bp Ori: AKJ59805.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3219516-3220155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 219516-3 220155 bp Feature: domain Description: GIIM Note: maturase Location: 3220230-3220455 bp Feature: domain Description: GIIM Note: maturase Location: 3 22023 0-3 220455 bp Feature: gene Location: 3220814-3221074 bp Feature: gene Location: 3221282-3221602 bp Feature: gene Location: 3259009-3259914 bp Ori: AKJ59839.1 Feature: domain Description: NupC Location: 3259012-3259903 bp Feature: domain Description: NupC Location: 3 259012-3 259903 bp Feature: gene Location: 3260357-3260611 bp Feature: gene Location: 3260643-3262439 bp Ori: AKJ59841.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3260937-3261633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 26093 7-3 26163 3 bp Feature: domain Description: HNHc Note: nucleases Location: 3262233-3262308 bp Feature: domain Description: HNHc Note: nucleases Location: 3 26223 3 -3 2623 08 bp Feature: gene Location: 3262605-3262892 bp Ori: AKJ59842.1 Feature: domain Description: NupC Location: 3262611-3262890 bp Feature: domain Description: NupC Location: 3 262611-3 262890 bp Feature: gene Location: 3263242-3264423 bp Ori: AKJ59843.1 Feature: domain Description: NupC Location: 3263245-3264421 bp Feature: domain Description: NupC Location: 3 263 245-3 264421 bp Feature: gene Location: 4437624-4438361 bp Ori: AKJ61035.1 Feature: domain Description: rnc Location: 4437675-4438353 bp Feature: domain Description: rnc Location: 443 7675-443 83 53 bp Feature: gene Location: 4438508-4438999 bp Ori: AKJ61036.1 Feature: domain Description: SMC_prok_B Location: 4438514-4438982 bp Feature: domain Description: SMC_prok_B Location: 443 8514-443 8982 bp Feature: gene Location: 4439673-4441478 bp Ori: AKJ61037.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4439967-4440663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 443 9967-4440663 bp Feature: domain Description: HNHc Note: nucleases Location: 4441224-4441362 bp Feature: domain Description: HNHc Note: nucleases Location: 4441224-44413 62 bp Feature: gene Location: 4441822-4444683 bp Ori: AKJ61038.1 Feature: domain Description: SMC_prok_B Location: 4441828-4444651 bp Feature: domain Description: SMC_prok_B Location: 4441828-4444651 bp Feature: gene Location: 4444699-4445688 bp Ori: AKJ61039.1 Feature: domain Description: PRK10416 Location: 4444723-4445665 bp Feature: domain Description: PRK10416 Location: 4444723 -4445665 bp Feature: gene Location: 4640536-4641012 bp Ori: AKJ61220.1 Feature: domain Description: CdnL Location: 4640554-4641007 bp Feature: domain Description: CdnL Location: 4640554-4641007 bp Feature: gene Location: 4641574-4641828 bp Ori: AKJ61221.1 Feature: domain Description: FadH Location: 4641661-4641793 bp Feature: domain Description: FadH Location: 4641661-4641793 bp Feature: gene Location: 4642491-4644296 bp Ori: AKJ61222.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4642785-4643481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4642785-4643 481 bp Feature: domain Description: HNHc Note: nucleases Location: 4644042-4644180 bp Feature: domain Description: HNHc Note: nucleases Location: 4644042-4644180 bp Feature: gene Location: 4645375-4646949 bp Ori: AKJ61223.1 Feature: domain Description: GltS_FMN Location: 4645522-4646884 bp Feature: domain Description: GltS_FMN Location: 4645522-4646884 bp Feature: gene Location: 4647061-4647549 bp Ori: AKJ61224.1 Feature: domain Description: DUF1453 Location: 4647079-4647511 bp Feature: domain Description: DUF1453 Location: 4647079-4647511 bp Feature: gene Location: 4817951-4818256 bp Feature: gene Location: 4819628-4819807 bp Feature: gene Location: 4819981-4821288 bp Ori: AKJ61367.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4820266-4820905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4820266-4820905 bp Feature: domain Description: GIIM Note: maturase Location: 4820980-4821205 bp Feature: domain Description: GIIM Note: maturase Location: 4820980-4821205 bp Feature: gene Location: 4821564-4821824 bp Feature: gene Location: 4823562-4824236 bp Ori: AKJ61369.1 Feature: domain Description: DUF1796 Location: 4823601-4824105 bp Feature: domain Description: DUF1796 Location: 4823 601-4824105 bp Feature: gene Location: 5148346-5148546 bp Feature: gene Location: 5150082-5150261 bp Feature: gene Location: 5150435-5151742 bp Ori: AKJ61667.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5150720-5151359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5150720-51513 59 bp Feature: domain Description: GIIM Note: maturase Location: 5151434-5151659 bp Feature: domain Description: GIIM Note: maturase Location: 515143 4-5151659 bp Feature: gene Location: 5152018-5152278 bp Feature: gene Location: 5153847-5154704 bp Ori: AKJ61669.1 Feature: domain Description: WcaG Location: 5153850-5154669 bp Feature: domain Description: WcaG Location: 5153 850-5154669 bp Feature: gene Location: 5161895-5162602 bp Ori: AKJ61678.1 Feature: domain Description: OmpR Location: 5161904-5162573 bp Feature: domain Description: OmpR Location: 5161904-5162573 bp Feature: gene Location: 5162599-5162850 bp Feature: gene Location: 5163524-5165329 bp Ori: AKJ61680.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5163818-5164514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5163 818-5164514 bp Feature: domain Description: HNHc Note: nucleases Location: 5165075-5165213 bp Feature: domain Description: HNHc Note: nucleases Location: 5165075-5165213 bp Feature: gene Location: 5166640-5168268 bp Ori: AKJ62324.1 Feature: domain Description: Uup Location: 5166649-5166880 bp Feature: domain Description: Uup Location: 5166649-5166880 bp Feature: domain Description: Uup Location: 5166895-5168104 bp Feature: domain Description: Uup Location: 5166895-5168104 bp Feature: gene Location: 5168289-5168873 bp Ori: AKJ61681.1 Feature: domain Description: Acetyltransf_3 Location: 5168340-5168793 bp Feature: domain Description: Acetyltransf_3 Location: 51683 40-5168793 bp Feature: gene Location: 5353965-5354237 bp Ori: AKJ61846.1 Feature: domain Description: HTH_ARAC Location: 5353980-5354223 bp Feature: domain Description: HTH_ARAC Location: 53 53 980-53 54223 bp Feature: gene Location: 5355538-5355717 bp Feature: gene Location: 5355891-5357198 bp Ori: AKJ61848.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5356176-5356815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53 56176-53 56815 bp Feature: domain Description: GIIM Note: maturase Location: 5356890-5357115 bp Feature: domain Description: GIIM Note: maturase Location: 53 56890-53 57115 bp Feature: gene Location: 5357474-5357734 bp Feature: gene Location: 5358696-5359541 bp Ori: AKJ61850.1 Feature: domain Description: PRK06914 Location: 5358699-5359536 bp Feature: domain Description: PRK06914 Location: 53 58699-53 5953 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MgtE (pfam01769), RimL (COG1670), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Lysozyme_like (pfam13702), YxeA (COG5294), GIIM (pfam08388), CC3_like_SDR_a (cd05250), DDE_Tnp_1 (pfam01609)
VOC_Bs_YwkD_like (cd08352), NupC (COG1972), DppC (COG1173), SrmB (COG0513), DUF1836 (pfam08876), UvdE (pfam03851), CBM_4_9 (pfam02018), rnc (PRK00102), SMC_prok_B (TIGR02168), PRK10416 (signal recognition particle-docking protein FtsY; Provisional)
CdnL (COG1329), FadH (COG1902), GltS_FMN (cd02808), DUF1453 (pfam07301), DUF1796 (pfam08795), WcaG (COG0451), OmpR (COG0745), Uup (COG0488), Acetyltransf_3 (pfam13302), HTH_ARAC (smart00342)
PRK06914 (SDR family oxidoreductase)