myRT

myRT report for GCA_001017655.1_ASM101765v1

Download annotations/find similar RTs

Seq: CP010904.1 Kiritimatiella glycovorans strain L21-Fru-AB chromosome, complete genome (2949723 bp)
Overview 1 RT 1: 72905-79780 bp 2 RT 2: 277368-282479 bp 3 RT 3: 1081162-1087204 bp 4 RT 4: 1261310-1268273 bp 5 RT 5: 1696734-1703208 bp 6 RT 6: 1745399-1753233 bp 7 RT 7: 2517391-2524305 bp 8 RT 8: 2720121-2726507 bp 9 RT 9: 2904925-2911910 bp Neighborhood of RT #1 [72905, 79780] Cellulase Glyco_hydro_5_C COG3547 RVT-GII GIIM SGSH Neighborhood of RT #2 [277368, 282479] DUF1080 Unstab_antitox RVT-GII GIIM PemK_toxin Neighborhood of RT #3 [1081162, 1087212] Laminin_G_3 GH32_EcAec43-like Laminin_G_3 GH32_EcAec43-like RVT-GII GIIM rbfA Mtu_PIN_fam Neighborhood of RT #4 [1261310, 1268296] DUF378 PRK09912 RVT-GII GIIM YhcC COG2521 Methyltransf_30 Plancto_Ver_chp Neighborhood of RT #5 [1696734, 1703208] 2-oxoacid_dh lipoamide_DH RVT-GII GIIM COG3547 Neighborhood of RT #6 [1745399, 1753769] COG2442 PBP1_XylR GlxA RVT-GII GIIM ATH1 ARS_like Neighborhood of RT #7 [2517391, 2524316] IclR HTH_ARAC RVT-GII GIIM Laminin_G_3 Pectate_lyase_3 Beta_helix PEP_exosort Neighborhood of RT #8 [2720121, 2726533] GTB_UDP-GlcNAc_2-Epimerase COG1373 RVT-GII GIIM COG3547 PIN_VapC4-5_FitB-like Neighborhood of RT #9 [2904925, 2911996] PBP1_XylR AraC Bac_rhamnosid6H Bac_rhamnosid_C RVT-GII GIIM Tra5 InsE Feature: gene Location: 72905-74380 bp Ori: AKJ63359.1 Feature: domain Description: Cellulase Location: 73151-73901 bp Feature: domain Description: Cellulase Location: 731 51 -73901 bp Feature: domain Description: Glyco_hydro_5_C Location: 74039-74252 bp Feature: domain Description: Glyco_hydro_5_C Location: 74039-74252 bp Feature: gene Location: 75042-76070 bp Ori: AKJ63360.1 Feature: domain Description: COG3547 Location: 75192-76032 bp Feature: domain Description: COG3547 Location: 751 92-76032 bp Feature: gene Location: 76601-77932 bp Ori: AKJ63361.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76928-77588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76928-77588 bp Feature: domain Description: GIIM Note: maturase Location: 77663-77864 bp Feature: domain Description: GIIM Note: maturase Location: 77663-77864 bp Feature: gene Location: 78656-79594 bp Ori: AKJ63362.1 Feature: domain Description: SGSH Location: 78737-79556 bp Feature: domain Description: SGSH Location: 78737-79556 bp Feature: gene Location: 79607-79780 bp Feature: gene Location: 277368-278048 bp Ori: AKJ63537.1 Feature: domain Description: DUF1080 Location: 277431-278034 bp Feature: domain Description: DUF1 080 Location: 277431 -278034 bp Feature: gene Location: 278460-278687 bp Ori: AKJ63538.1 Feature: domain Description: Unstab_antitox Location: 278499-278655 bp Feature: domain Description: Unstab_antitox Location: 278499-278655 bp Feature: gene Location: 280319-281650 bp Ori: AKJ63539.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 280646-281306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 280646-281 306 bp Feature: domain Description: GIIM Note: maturase Location: 281381-281582 bp Feature: domain Description: GIIM Note: maturase Location: 281 381 -281 582 bp Feature: gene Location: 281942-282262 bp Ori: AKJ63540.1 Gene: mazF9 Feature: domain Description: PemK_toxin Location: 281948-282248 bp Feature: domain Description: PemK_toxin Location: 281 948-282248 bp Feature: gene Location: 282249-282479 bp Feature: gene Location: 1081162-1084167 bp Ori: AKJ64183.1 Feature: domain Description: Laminin_G_3 Location: 1081909-1082128 bp Feature: domain Description: Laminin_G_3 Location: 1 081 909-1 0821 28 bp Feature: domain Description: GH32_EcAec43-like Location: 1082245-1082587 bp Feature: domain Description: GH32_EcAec43-like Location: 1 082245-1 082587 bp Feature: domain Description: Laminin_G_3 Location: 1082692-1083118 bp Feature: domain Description: Laminin_G_3 Location: 1 082692-1 0831 1 8 bp Feature: domain Description: GH32_EcAec43-like Location: 1083319-1083637 bp Feature: domain Description: GH32_EcAec43-like Location: 1 08331 9-1 083637 bp Feature: gene Location: 1084369-1084728 bp Feature: gene Location: 1085231-1086556 bp Ori: AKJ64185.1 Gene: ltrA_3 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1085585-1086206 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 085585-1 086206 bp Feature: domain Description: GIIM Note: maturase Location: 1086251-1086467 bp Feature: domain Description: GIIM Note: maturase Location: 1 086251 -1 086467 bp Feature: gene Location: 1086602-1086781 bp Ori: AKJ64186.1 Feature: domain Description: rbfA Location: 1086608-1086764 bp Feature: domain Description: rbfA Location: 1 086608-1 086764 bp Feature: gene Location: 1086778-1087212 bp Ori: AKJ64187.1 Feature: domain Description: Mtu_PIN_fam Location: 1086784-1087204 bp Feature: domain Description: Mtu_PIN_fam Location: 1 086784-1 087204 bp Feature: gene Location: 1261310-1261501 bp Ori: AKJ64323.1 Feature: domain Description: DUF378 Location: 1261316-1261490 bp Feature: domain Description: DUF378 Location: 1 261 31 6-1 261 490 bp Feature: gene Location: 1262645-1263631 bp Ori: AKJ64324.1 Gene: gpr Feature: domain Description: PRK09912 Location: 1262654-1263614 bp Feature: domain Description: PRK0991 2 Location: 1 262654-1 26361 4 bp Feature: gene Location: 1264530-1265861 bp Ori: AKJ64325.1 Gene: ltrA_4 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1264857-1265517 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 264857-1 26551 7 bp Feature: domain Description: GIIM Note: maturase Location: 1265592-1265793 bp Feature: domain Description: GIIM Note: maturase Location: 1 265592-1 265793 bp Feature: gene Location: 1266016-1267809 bp Ori: AKJ64326.1 Feature: domain Description: YhcC Location: 1266052-1266964 bp Feature: domain Description: YhcC Location: 1 266052-1 266964 bp Feature: domain Description: COG2521 Location: 1267159-1267207 bp Feature: domain Description: COG2521 Location: 1 2671 59-1 267207 bp Feature: domain Description: Methyltransf_30 Location: 1267402-1267636 bp Feature: domain Description: Methyltransf_30 Location: 1 267402-1 267636 bp Feature: gene Location: 1267889-1268296 bp Ori: AKJ64327.1 Feature: domain Description: Plancto_Ver_chp Location: 1267919-1268273 bp Feature: domain Description: Plancto_Ver_chp Location: 1 26791 9-1 268273 bp Feature: gene Location: 1696734-1697402 bp Ori: AKJ64680.1 Gene: pdhC_2 Feature: domain Description: 2-oxoacid_dh Location: 1696737-1697385 bp Feature: domain Description: 2-oxoacid_dh Location: 1 696737-1 697385 bp Feature: gene Location: 1697464-1698855 bp Ori: AKJ64681.1 Gene: pdhD Feature: domain Description: lipoamide_DH Location: 1697473-1698835 bp Feature: domain Description: lipoamide_DH Location: 1 697473-1 698835 bp Feature: gene Location: 1699301-1700587 bp Ori: AKJ64682.1 Gene: ltrA_5 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1699628-1700288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 699628-1 700288 bp Feature: domain Description: GIIM Note: maturase Location: 1700363-1700570 bp Feature: domain Description: GIIM Note: maturase Location: 1 700363-1 700570 bp Feature: gene Location: 1701118-1702146 bp Ori: AKJ64683.1 Feature: domain Description: COG3547 Location: 1701268-1702108 bp Feature: domain Description: COG3547 Location: 1 701 268-1 7021 08 bp Feature: gene Location: 1702909-1703208 bp Feature: gene Location: 1745399-1745623 bp Ori: AKJ64722.1 Feature: domain Description: COG2442 Location: 1745405-1745609 bp Feature: domain Description: COG2442 Location: 1 745405-1 745609 bp Feature: gene Location: 1745944-1747101 bp Ori: AKJ64723.1 Feature: domain Description: PBP1_XylR Location: 1745986-1746760 bp Feature: domain Description: PBP1 _XylR Location: 1 745986-1 746760 bp Feature: domain Description: GlxA Location: 1746769-1747093 bp Feature: domain Description: GlxA Location: 1 746769-1 747093 bp Feature: gene Location: 1747266-1748597 bp Ori: AKJ64724.1 Gene: ltrA_6 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1747593-1748253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 747593-1 748253 bp Feature: domain Description: GIIM Note: maturase Location: 1748328-1748529 bp Feature: domain Description: GIIM Note: maturase Location: 1 748328-1 748529 bp Feature: gene Location: 1749407-1751743 bp Ori: AKJ64725.1 Gene: kojP_2 Feature: domain Description: ATH1 Location: 1749452-1751723 bp Feature: domain Description: ATH1 Location: 1 749452-1 751 723 bp Feature: gene Location: 1751823-1753769 bp Ori: AKJ64726.1 Gene: atsA_21 Feature: domain Description: ARS_like Location: 1751949-1753233 bp Feature: domain Description: ARS_like Location: 1 751 949-1 753233 bp Feature: gene Location: 2517391-2518170 bp Ori: AKJ65368.1 Feature: domain Description: IclR Location: 2517409-2518141 bp Feature: domain Description: IclR Location: 251 7409-251 81 41 bp Feature: gene Location: 2518179-2518958 bp Ori: AKJ65369.1 Feature: domain Description: HTH_ARAC Location: 2518704-2518944 bp Feature: domain Description: HTH_ARAC Location: 251 8704-251 8944 bp Feature: gene Location: 2519150-2520481 bp Ori: AKJ65370.1 Gene: ltrA_7 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2519477-2520137 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 251 9477-25201 37 bp Feature: domain Description: GIIM Note: maturase Location: 2520212-2520413 bp Feature: domain Description: GIIM Note: maturase Location: 252021 2-252041 3 bp Feature: gene Location: 2521222-2523141 bp Ori: AKJ65371.1 Feature: domain Description: Laminin_G_3 Location: 2521573-2522029 bp Feature: domain Description: Laminin_G_3 Location: 2521 573-2522029 bp Feature: domain Description: Pectate_lyase_3 Location: 2522080-2522302 bp Feature: domain Description: Pectate_lyase_3 Location: 2522080-2522302 bp Feature: domain Description: Beta_helix Location: 2522614-2523136 bp Feature: domain Description: Beta_helix Location: 252261 4-25231 36 bp Feature: gene Location: 2523138-2524316 bp Ori: AKJ65372.1 Feature: domain Description: PEP_exosort Location: 2524242-2524305 bp Feature: domain Description: PEP_exosort Location: 2524242-2524305 bp Feature: gene Location: 2720121-2721260 bp Ori: AKJ65533.1 Gene: wbpI Feature: domain Description: GTB_UDP-GlcNAc_2-Epimerase Location: 2720133-2721246 bp Feature: domain Description: GTB_UDP-GlcNAc_2-Epimerase Location: 27201 33-2721 246 bp Feature: gene Location: 2721446-2722570 bp Ori: AKJ65534.1 Feature: domain Description: COG1373 Location: 2721467-2722430 bp Feature: domain Description: COG1 373 Location: 2721 467-2722430 bp Feature: gene Location: 2722754-2724085 bp Ori: AKJ65535.1 Gene: ltrA_8 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2723081-2723741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2723081 -2723741 bp Feature: domain Description: GIIM Note: maturase Location: 2723816-2724017 bp Feature: domain Description: GIIM Note: maturase Location: 272381 6-272401 7 bp Feature: gene Location: 2724616-2725644 bp Ori: AKJ65536.1 Feature: domain Description: COG3547 Location: 2724766-2725606 bp Feature: domain Description: COG3547 Location: 2724766-2725606 bp Feature: gene Location: 2726156-2726533 bp Ori: AKJ65537.1 Feature: domain Description: PIN_VapC4-5_FitB-like Location: 2726180-2726507 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 27261 80-2726507 bp Feature: gene Location: 2904925-2906151 bp Ori: AKJ65681.1 Gene: xylR_8 Feature: domain Description: PBP1_XylR Location: 2904994-2905762 bp Feature: domain Description: PBP1 _XylR Location: 2904994-2905762 bp Feature: domain Description: AraC Location: 2905783-2906089 bp Feature: domain Description: AraC Location: 2905783-2906089 bp Feature: gene Location: 2906148-2908691 bp Ori: AKJ65682.1 Feature: domain Description: Bac_rhamnosid6H Location: 2907273-2908053 bp Feature: domain Description: Bac_rhamnosid6H Location: 2907273-2908053 bp Feature: domain Description: Bac_rhamnosid_C Location: 2908398-2908611 bp Feature: domain Description: Bac_rhamnosid_C Location: 2908398-290861 1 bp Feature: gene Location: 2909558-2910295 bp Ori: AKJ65683.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2909564-2909951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2909564-2909951 bp Feature: domain Description: GIIM Note: maturase Location: 2910026-2910227 bp Feature: domain Description: GIIM Note: maturase Location: 291 0026-291 0227 bp Feature: gene Location: 2910525-2911526 bp Ori: AKJ65684.1 Feature: domain Description: Tra5 Location: 2910600-2911386 bp Feature: domain Description: Tra5 Location: 291 0600-291 1 386 bp Feature: gene Location: 2911529-2911996 bp Ori: AKJ65685.1 Feature: domain Description: InsE Location: 2911655-2911910 bp Feature: domain Description: InsE Location: 291 1 655-291 1 91 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cellulase (pfam00150), Glyco_hydro_5_C (pfam18564), COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), SGSH (cd16027), DUF1080 (pfam06439), Unstab_antitox (pfam09720), PemK_toxin (pfam02452), Laminin_G_3 (pfam13385)
GH32_EcAec43-like (cd08995), rbfA (TIGR00082), Mtu_PIN_fam (TIGR00028), DUF378 (pfam04070), PRK09912 (L-glyceraldehyde 3-phosphate reductase; Provisional), YhcC (COG1242), COG2521 (Predicted archaeal methyltransferase ), Methyltransf_30 (pfam05430), Plancto_Ver_chp (TIGR04138), 2-oxoacid_dh (pfam00198)
lipoamide_DH (TIGR01350), COG2442 (Uncharacterized conserved protein, DUF433 family ), PBP1_XylR (cd01543), GlxA (COG4977), ATH1 (COG1554), ARS_like (cd16146), IclR (pfam01614), HTH_ARAC (smart00342), Pectate_lyase_3 (pfam12708), Beta_helix (pfam13229)
PEP_exosort (TIGR02595), GTB_UDP-GlcNAc_2-Epimerase (cd03786), COG1373 (Predicted ATPase, AAA+ superfamily ), PIN_VapC4-5_FitB-like (cd18754), AraC (COG2207), Bac_rhamnosid6H (pfam17389), Bac_rhamnosid_C (pfam17390), Tra5 (COG2801), InsE (COG2963)