myRT

myRT report for GCA_001020725.2_ASM102072v2

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Seq: CP017687.1 Pseudomonas lundensis strain AU1044 chromosome, complete genome (4814265 bp)
Overview 1 RT 1: 659269-665205 bp 2 RT 2: 985309-992597 bp Neighborhood of RT #1 [659269, 665405] RVT-Retrons TIR_2 PRK09362 YycJ-like_MBL-fold Neighborhood of RT #2 [985309, 992602] LTA_synthase DUF2188 RVT_N RVT-GII GIIM HNH groEL groES Feature: gene Location: 659269-660939 bp Feature: gene Location: 661077-661661 bp Feature: gene Location: 661695-663161 bp Ori: AOZ11702.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 661842-662433 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 661 842-662433 bp Feature: domain Description: TIR_2 Location: 662769-663126 bp Feature: domain Description: TIR_2 Location: 662769-6631 26 bp Feature: gene Location: 663905-664618 bp Ori: AOZ11703.1 Feature: domain Description: PRK09362 Location: 663908-664607 bp Feature: domain Description: PRK09362 Location: 663908-664607 bp Feature: gene Location: 664647-665405 bp Ori: AOZ11704.1 Feature: domain Description: YycJ-like_MBL-fold Location: 664662-665205 bp Feature: domain Description: YycJ-like_MBL-fold Location: 664662-665205 bp Feature: gene Location: 985309-987258 bp Ori: AOZ11964.1 Feature: domain Description: LTA_synthase Location: 986137-986947 bp Feature: domain Description: LTA_synthase Location: 9861 37-986947 bp Feature: gene Location: 987579-987803 bp Ori: AOZ15029.1 Feature: domain Description: DUF2188 Location: 987597-987774 bp Feature: domain Description: DUF21 88 Location: 987597-987774 bp Feature: gene Location: 987918-989435 bp Ori: AOZ15030.1 Feature: domain Description: RVT_N Location: 987921-988068 bp Feature: domain Description: RVT_N Location: 987921 -988068 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 988116-988761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9881 1 6-988761 bp Feature: domain Description: GIIM Note: maturase Location: 988812-989046 bp Feature: domain Description: GIIM Note: maturase Location: 98881 2-989046 bp Feature: domain Description: HNH Note: nucleases Location: 989286-989424 bp Feature: domain Description: HNH Note: nucleases Location: 989286-989424 bp Feature: gene Location: 990616-992259 bp Ori: AOZ11965.1 Feature: domain Description: groEL Location: 990622-992242 bp Feature: domain Description: groEL Location: 990622-992242 bp Feature: gene Location: 992309-992602 bp Ori: AOZ11966.1 Feature: domain Description: groES Location: 992312-992597 bp Feature: domain Description: groES Location: 99231 2-992597 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, TIR_2 (pfam13676), PRK09362 (phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed), YycJ-like_MBL-fold (cd07733), LTA_synthase (cd16015), DUF2188 (pfam09954), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)
groEL (PRK12852), groES (PRK14533)