myRT

myRT report for GCA_001021855.1_ASM102185v1

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Seq: CP007037.1 Shigella flexneri G1663, complete genome (4594725 bp)
Overview 1 RT 1: 3069602-3074148 bp Neighborhood of RT #1 [3069602, 3074150] PRK09409 PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 3069602-3070507 bp Ori: AKK55472.1 Feature: domain Description: PRK09409 Location: 3069605-3070505 bp Feature: domain Description: PRK09409 Location: 3069605-3070505 bp Feature: gene Location: 3070667-3071053 bp Ori: AKK55473.1 Feature: domain Description: PHA02517 Location: 3070670-3071051 bp Feature: domain Description: PHA0251 7 Location: 3070670-3071 051 bp Feature: gene Location: 3071230-3072753 bp Ori: AKK55474.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3071503-3072235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3071 503-3072235 bp Feature: domain Description: GIIM Note: maturase Location: 3072310-3072508 bp Feature: domain Description: GIIM Note: maturase Location: 307231 0-3072508 bp Feature: gene Location: 3073345-3073824 bp Ori: AKK55475.1 Feature: domain Description: PHA02517 Location: 3073405-3073759 bp Feature: domain Description: PHA0251 7 Location: 3073405-3073759 bp Feature: gene Location: 3073824-3074150 bp Ori: AKK55476.1 Feature: domain Description: InsE Location: 3073827-3074148 bp Feature: domain Description: InsE Location: 3073827-30741 48 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09409 (IS2 transposase TnpB; Reviewed), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)

Seq: CP007038.1 Shigella flexneri G1663 plasmid pG1663, complete sequence (222586 bp)
Overview 1 RT 1: 30164-33373 bp 2 RT 2: 155900-158904 bp Neighborhood of RT #1 [30164, 33375] COG3547 DDE_Tnp_IS66_C RVT-GII GIIM DDE_Tnp_IS66 PHA02517 Neighborhood of RT #2 [155900, 158924] GIIM RVT-GII Tra5 PAP2_acid_phosphatase Feature: gene Location: 30164-30649 bp Ori: AKK56985.1 Feature: domain Description: COG3547 Location: 30182-30635 bp Feature: domain Description: COG3547 Location: 30182 -30635 bp Feature: gene Location: 30676-30822 bp Ori: AKK56986.1 Feature: domain Description: DDE_Tnp_IS66_C Location: 30688-30799 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 30688-30799 bp Feature: gene Location: 30938-32155 bp Ori: AKK56987.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31124-31778 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3112 4-31778 bp Feature: domain Description: GIIM Note: maturase Location: 31856-32078 bp Feature: domain Description: GIIM Note: maturase Location: 31856-32 078 bp Feature: gene Location: 32632-32769 bp Ori: AKK56988.1 Feature: domain Description: DDE_Tnp_IS66 Location: 32644-32743 bp Feature: domain Description: DDE_Tnp_IS66 Location: 32 644-32 743 bp Feature: gene Location: 32857-33375 bp Ori: AKK56989.1 Feature: domain Description: PHA02517 Location: 32860-33373 bp Feature: domain Description: PHA02 517 Location: 32 860-33373 bp Feature: gene Location: 155900-156031 bp Feature: gene Location: 156384-156710 bp Ori: AKK57106.1 Feature: domain Description: GIIM Note: maturase Location: 156417-156636 bp Feature: domain Description: GIIM Note: maturase Location: 156417-156636 bp Feature: gene Location: 156763-157566 bp Ori: AKK57107.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 157063-157558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 157063-157558 bp Feature: gene Location: 157579-157779 bp Ori: AKK57108.1 Feature: domain Description: Tra5 Location: 157588-157762 bp Feature: domain Description: Tra5 Location: 157588-157762 bp Feature: gene Location: 158175-158924 bp Ori: AKK57109.1 Feature: domain Description: PAP2_acid_phosphatase Location: 158250-158904 bp Feature: domain Description: PAP2 _acid_phosphatase Location: 1582 50-158904 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050), PHA02517 (putative transposase OrfB; Reviewed), Tra5 (COG2801), PAP2_acid_phosphatase (cd03397)