myRT

myRT report for GCA_001022135.1_ASM102213v1

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Seq: CP011602.1 Phytobacter ursingii strain CAV1151 chromosome, complete genome (5529134 bp)
Overview 1 RT 1: 1093427-1097715 bp 2 RT 2: 4129874-4135697 bp Neighborhood of RT #1 [1093427, 1098497] HTH_XRE RVT-Retrons PRK13889 CoiA Neighborhood of RT #2 [4129874, 4135702] DUF4156 DUF2188 RVT_N RVT-GII GIIM HNHc groEL groES Feature: gene Location: 1093427-1093642 bp Feature: gene Location: 1093733-1094014 bp Ori: AKL11355.1 Feature: domain Description: HTH_XRE Location: 1093748-1093913 bp Feature: domain Description: HTH_XRE Location: 1 093748-1 09391 3 bp Feature: gene Location: 1094007-1095107 bp Ori: AKL11356.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1094148-1094700 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 0941 48-1 094700 bp Feature: gene Location: 1095184-1096686 bp Ori: AKL11357.1 Feature: domain Description: PRK13889 Location: 1095187-1095769 bp Feature: domain Description: PRK1 3889 Location: 1 0951 87-1 095769 bp Feature: gene Location: 1097496-1098497 bp Ori: AKL11358.1 Feature: domain Description: CoiA Location: 1097577-1097715 bp Feature: domain Description: CoiA Location: 1 097577-1 09771 5 bp Feature: gene Location: 4129874-4130227 bp Ori: AKL13985.1 Feature: domain Description: DUF4156 Location: 4129943-4130219 bp Feature: domain Description: DUF41 56 Location: 41 29943-41 3021 9 bp Feature: gene Location: 4130615-4130839 bp Ori: AKL13986.1 Feature: domain Description: DUF2188 Location: 4130633-4130810 bp Feature: domain Description: DUF21 88 Location: 41 30633-41 3081 0 bp Feature: gene Location: 4130946-4132604 bp Ori: AKL13987.1 Feature: domain Description: RVT_N Location: 4130997-4131240 bp Feature: domain Description: RVT_N Location: 41 30997-41 31 240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4131285-4131930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 31 285-41 31 930 bp Feature: domain Description: GIIM Note: maturase Location: 4131984-4132215 bp Feature: domain Description: GIIM Note: maturase Location: 41 31 984-41 3221 5 bp Feature: domain Description: HNHc Note: nucleases Location: 4132428-4132587 bp Feature: domain Description: HNHc Note: nucleases Location: 41 32428-41 32587 bp Feature: gene Location: 4133718-4135364 bp Ori: AKL13988.1 Gene: groEL Feature: domain Description: groEL Location: 4133724-4135350 bp Feature: domain Description: groEL Location: 41 33724-41 35350 bp Feature: gene Location: 4135409-4135702 bp Ori: AKL13989.1 Gene: groES Feature: domain Description: groES Location: 4135412-4135697 bp Feature: domain Description: groES Location: 41 3541 2-41 35697 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, PRK13889 (conjugal transfer relaxase TraA; Provisional), CoiA (pfam06054), DUF4156 (pfam13698), DUF2188 (pfam09954), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)
groEL (PRK12852), groES (PRK14533)