myRT

myRT report for GCA_001050135.1_ASM105013v1

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Seq: CP012040.1 Cyclobacterium amurskyense strain KCTC 12363, complete genome (6158829 bp)
Overview 1 RT 1: 3381725-3387202 bp 2 RT 2: 4235076-4240368 bp 3 RT 3: 4275292-4280310 bp Neighborhood of RT #1 [3381725, 3387202] RVT-GII GIIM PRX_like2 Neighborhood of RT #2 [4235076, 4240397] RVT-GII GIIM LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C Neighborhood of RT #3 [4275292, 4280372] BA_2398_like RVT-GII GIIM TPR TPR Feature: gene Location: 3381725-3381922 bp Feature: gene Location: 3382335-3383777 bp Feature: gene Location: 3384361-3385473 bp Ori: AKP52218.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3384556-3385171 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3384556-33851 71 bp Feature: domain Description: GIIM Note: maturase Location: 3385246-3385438 bp Feature: domain Description: GIIM Note: maturase Location: 3385246-3385438 bp Feature: gene Location: 3386180-3386764 bp Ori: AKP52219.1 Feature: domain Description: PRX_like2 Location: 3386258-3386702 bp Feature: domain Description: PRX_like2 Location: 3386258-3386702 bp Feature: gene Location: 3386924-3387202 bp Feature: gene Location: 4235076-4235621 bp Feature: gene Location: 4235611-4236039 bp Feature: gene Location: 4236665-4237957 bp Ori: AKP52868.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4236920-4237577 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4236920-4237577 bp Feature: domain Description: GIIM Note: maturase Location: 4237715-4237880 bp Feature: domain Description: GIIM Note: maturase Location: 423771 5-4237880 bp Feature: gene Location: 4238579-4238818 bp Feature: gene Location: 4238877-4240397 bp Ori: AKP52870.1 Feature: domain Description: LZ_Tnp_IS66 Location: 4238985-4239216 bp Feature: domain Description: LZ_Tnp_IS66 Location: 4238985-423921 6 bp Feature: domain Description: zf-IS66 Location: 4239252-4239342 bp Feature: domain Description: zf-IS66 Location: 4239252-4239342 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4239393-4240239 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4239393-4240239 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4240260-4240368 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4240260-4240368 bp Feature: gene Location: 4275292-4276029 bp Feature: gene Location: 4276171-4276851 bp Ori: AKP52899.1 Feature: domain Description: BA_2398_like Location: 4276399-4276615 bp Feature: domain Description: BA_2398_like Location: 4276399-427661 5 bp Feature: gene Location: 4277463-4278755 bp Ori: AKP52900.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4277718-4278375 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 427771 8-4278375 bp Feature: domain Description: GIIM Note: maturase Location: 4278513-4278678 bp Feature: domain Description: GIIM Note: maturase Location: 427851 3-4278678 bp Feature: gene Location: 4278876-4279400 bp Feature: gene Location: 4279476-4280372 bp Ori: AKP52902.1 Feature: domain Description: TPR Location: 4279563-4279677 bp Feature: domain Description: TPR Location: 4279563-4279677 bp Feature: domain Description: TPR Location: 4280091-4280310 bp Feature: domain Description: TPR Location: 4280091 -428031 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRX_like2 (cd02970), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), BA_2398_like (cd14815), TPR (smart00028)