myRT

myRT report for GCA_001182785.1_ASM118278v1

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Seq: CP012101.1 Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence (337579 bp)
Overview 1 RT 1: 206050-210215 bp Neighborhood of RT #1 [206050, 210215] RVT-GII HNHc VirD4 Feature: gene Location: 206050-207873 bp Ori: AKR13027.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 206344-207037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 206344-207037 bp Feature: domain Description: HNHc Note: nucleases Location: 207619-207760 bp Feature: domain Description: HNHc Note: nucleases Location: 20761 9-207760 bp Feature: gene Location: 208512-209135 bp Ori: AKR13028.1 Feature: domain Description: VirD4 Location: 208593-209094 bp Feature: domain Description: VirD4 Location: 208593-209094 bp Feature: gene Location: 209226-210215 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), VirD4 (COG3505)

Seq: CP012099.1 Bacillus thuringiensis strain HS18-1, complete genome (5292526 bp)
Overview 1 RT 1: 5001603-5009002 bp Neighborhood of RT #1 [5001603, 5009025] PRK09284 RVT-GII PRK10420 DUF4870 Feature: gene Location: 5001603-5003363 bp Ori: AKR12049.1 Feature: domain Description: PRK09284 Location: 5001621-5003361 bp Feature: domain Description: PRK092 84 Location: 500162 1-5003361 bp Feature: gene Location: 5004530-5004832 bp Feature: gene Location: 5006319-5006549 bp Ori: AKR12051.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5006367-5006487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5006367-5006487 bp Feature: gene Location: 5006750-5008411 bp Ori: AKR12052.1 Feature: domain Description: PRK10420 Location: 5006753-5008409 bp Feature: domain Description: PRK1042 0 Location: 5006753-5008409 bp Feature: gene Location: 5008708-5009025 bp Ori: AKR12053.1 Feature: domain Description: DUF4870 Location: 5008726-5009002 bp Feature: domain Description: DUF4870 Location: 500872 6-5009002 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09284 (thiamine biosynthesis protein ThiC; Provisional), RVT-GII, PRK10420 (L-lactate permease; Provisional), DUF4870 (pfam09685)

Seq: CP012100.1 Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence (509170 bp)
Overview 1 RT 1: 13654-19469 bp 2 RT 2: 348216-356050 bp 3 RT 3: 500314-504746 bp Neighborhood of RT #1 [13654, 19504] McrBC RVT-GII HNHc RadC HipB Neighborhood of RT #2 [348216, 356050] RVT-GII HNHc CwlT_like Spr Neighborhood of RT #3 [500314, 504746] WXG100_ESAT6 WXG100_ESAT6 TolA_bind_tri RVT-UG17 SLATT_5 Feature: gene Location: 13654-14871 bp Ori: AKR12478.1 Feature: domain Description: McrBC Location: 13798-14731 bp Feature: domain Description: McrBC Location: 13 798-1473 1 bp Feature: gene Location: 15957-16136 bp Feature: gene Location: 16325-18238 bp Ori: AKR12480.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16652-17393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16652-173 93 bp Feature: domain Description: HNHc Note: nucleases Location: 17957-18125 bp Feature: domain Description: HNHc Note: nucleases Location: 17957-18125 bp Feature: gene Location: 18349-18531 bp Ori: AKR12481.1 Feature: domain Description: RadC Location: 18388-18523 bp Feature: domain Description: RadC Location: 183 88-18523 bp Feature: gene Location: 19181-19504 bp Ori: AKR12482.1 Feature: domain Description: HipB Location: 19184-19469 bp Feature: domain Description: HipB Location: 19184-19469 bp Feature: gene Location: 348216-348698 bp Feature: gene Location: 348731-351457 bp Feature: gene Location: 352896-354692 bp Ori: AKR12724.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 353154-353859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 53 154-3 53 859 bp Feature: domain Description: HNHc Note: nucleases Location: 354420-354555 bp Feature: domain Description: HNHc Note: nucleases Location: 3 54420-3 54555 bp Feature: gene Location: 354758-355402 bp Ori: AKR12880.1 Feature: domain Description: CwlT_like Location: 354788-354977 bp Feature: domain Description: CwlT_like Location: 3 54788-3 54977 bp Feature: domain Description: Spr Location: 355013-355385 bp Feature: domain Description: Spr Location: 3 55013 -3 553 85 bp Feature: gene Location: 355454-356050 bp Feature: gene Location: 500314-500604 bp Ori: AKR12850.1 Feature: domain Description: WXG100_ESAT6 Location: 500347-500449 bp Feature: domain Description: WXG100_ESAT6 Location: 5003 47-500449 bp Feature: domain Description: WXG100_ESAT6 Location: 500506-500596 bp Feature: domain Description: WXG100_ESAT6 Location: 500506-500596 bp Feature: gene Location: 500577-500795 bp Ori: AKR12851.1 Feature: domain Description: TolA_bind_tri Location: 500586-500757 bp Feature: domain Description: TolA_bind_tri Location: 500586-500757 bp Feature: gene Location: 501733-503115 bp Ori: AKR12852.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 501967-502555 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 501967-502555 bp Feature: gene Location: 503123-503992 bp Ori: AKR12853.1 Feature: domain Description: SLATT_5 Location: 503429-503972 bp Feature: domain Description: SLATT_5 Location: 503 429-503 972 bp Feature: gene Location: 504498-504746 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT McrBC (pfam10117), RVT-GII, HNHc (smart00507), RadC (pfam04002), HipB (COG1396), CwlT_like, Spr (COG0791), WXG100_ESAT6 (TIGR03930), TolA_bind_tri (pfam16331), RVT-UG17
SLATT_5 (pfam18160)