myRT

myRT report for GCA_001188855.1_ASM118885v1

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Seq: CP009470.1 Staphylococcus schleiferi strain 1360-13, complete genome (2435632 bp)
Overview 1 RT 1: 45822-52664 bp 2 RT 2: 1815407-1820669 bp Neighborhood of RT #1 [45822, 52690] DEXHc_Snf SF2_C_SNF COG3464 RVT-Retrons ABC2_membrane_3 CcmA Neighborhood of RT #2 [1815407, 1820722] Abi_2 RVT-GII RVT-GII GIIM ComK Feature: gene Location: 45822-47690 bp Ori: AKS65978.1 Feature: domain Description: DEXHc_Snf Location: 46209-46818 bp Feature: domain Description: DEXHc_Snf Location: 46209-4681 8 bp Feature: domain Description: SF2_C_SNF Location: 47076-47490 bp Feature: domain Description: SF2_C_SNF Location: 47076-47490 bp Feature: gene Location: 47992-48813 bp Ori: AKS65979.1 Feature: domain Description: COG3464 Location: 47995-48754 bp Feature: domain Description: COG3464 Location: 47995-48754 bp Feature: gene Location: 48989-50668 bp Ori: AKS65980.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 49121-49730 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 491 21 -49730 bp Feature: gene Location: 50880-51965 bp Ori: AKS65981.1 Feature: domain Description: ABC2_membrane_3 Location: 50934-51936 bp Feature: domain Description: ABC2_membrane_3 Location: 50934-51 936 bp Feature: gene Location: 51965-52690 bp Ori: AKS65982.1 Feature: domain Description: CcmA Location: 51983-52664 bp Feature: domain Description: CcmA Location: 51 983-52664 bp Feature: gene Location: 1815407-1816444 bp Ori: AKS67505.1 Feature: domain Description: Abi_2 Location: 1815548-1816151 bp Feature: domain Description: Abi_2 Location: 1 81 5548-1 81 61 51 bp Feature: gene Location: 1816652-1817110 bp Feature: gene Location: 1817854-1818900 bp Ori: AKS67507.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1818070-1818148 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 81 8070-1 81 81 48 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1818154-1818445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 81 81 54-1 81 8445 bp Feature: domain Description: GIIM Note: maturase Location: 1818508-1818736 bp Feature: domain Description: GIIM Note: maturase Location: 1 81 8508-1 81 8736 bp Feature: gene Location: 1818961-1819170 bp Feature: gene Location: 1820096-1820722 bp Ori: AKS67509.1 Feature: domain Description: ComK Location: 1820120-1820669 bp Feature: domain Description: ComK Location: 1 8201 20-1 820669 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXHc_Snf (cd17919), SF2_C_SNF (cd18793), COG3464 (Transposase ), RVT-Retrons, ABC2_membrane_3 (pfam12698), CcmA (COG4133), Abi_2 (pfam07751), RVT-GII, GIIM (pfam08388), ComK (pfam06338)