myRT

myRT report for GCA_001262015.1_ASM126201v1

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Seq: CP012074.1 Prevotella fusca JCM 17724 strain W1435 chromosome 1, complete sequence (1828248 bp)
Overview 1 RT 1: 1564306-1569025 bp 2 RT 2: 1712546-1720907 bp Neighborhood of RT #1 [1564306, 1569025] PRK07093 PRK07101 RVT-Retrons RpoE Neighborhood of RT #2 [1712546, 1720951] HHH_3 DDE_Tnp_1_4 RVT-Retrons Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like Feature: gene Location: 1564306-1565295 bp Ori: AKU69421.1 Feature: domain Description: PRK07093 Location: 1564321-1565290 bp Feature: domain Description: PRK07093 Location: 1 564321 -1 565290 bp Feature: gene Location: 1565279-1565872 bp Ori: AKU69422.1 Feature: domain Description: PRK07101 Location: 1565282-1565834 bp Feature: domain Description: PRK071 01 Location: 1 565282-1 565834 bp Feature: gene Location: 1566035-1567360 bp Ori: AKU69423.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1566242-1566824 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 566242-1 566824 bp Feature: gene Location: 1567802-1568296 bp Ori: AKU69424.1 Feature: domain Description: RpoE Location: 1567817-1568282 bp Feature: domain Description: RpoE Location: 1 56781 7-1 568282 bp Feature: gene Location: 1568417-1569025 bp Feature: gene Location: 1712546-1714540 bp Ori: AKU69521.1 Feature: domain Description: HHH_3 Location: 1712711-1712858 bp Feature: domain Description: HHH_3 Location: 1 71 271 1 -1 71 2858 bp Feature: gene Location: 1714782-1716083 bp Ori: AKU69522.1 Feature: domain Description: DDE_Tnp_1_4 Location: 1714803-1716060 bp Feature: domain Description: DDE_Tnp_1 _4 Location: 1 71 4803-1 71 6060 bp Feature: gene Location: 1716490-1717584 bp Ori: AKU69523.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1716709-1717333 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 71 6709-1 71 7333 bp Feature: gene Location: 1717766-1718980 bp Feature: gene Location: 1719728-1720951 bp Ori: AKU69525.1 Feature: domain Description: Arm-DNA-bind_5 Location: 1719764-1720040 bp Feature: domain Description: Arm-DNA-bind_5 Location: 1 71 9764-1 720040 bp Feature: domain Description: Phage_int_SAM_5 Location: 1720094-1720376 bp Feature: domain Description: Phage_int_SAM_5 Location: 1 720094-1 720376 bp Feature: domain Description: INTN1_C_like Location: 1720433-1720907 bp Feature: domain Description: INTN1 _C_like Location: 1 720433-1 720907 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07093 (para-aminobenzoate synthase component I; Validated), PRK07101 (hypothetical protein; Provisional), RVT-Retrons, RpoE (COG3343), HHH_3 (pfam12836), DDE_Tnp_1_4 (pfam13701), Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185)