myRT

myRT report for GCA_001267405.1_ASM126740v1

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Seq: CP012369.1 Moorella thermoacetica strain DSM 521, complete genome (2527564 bp)
Overview 1 RT 1: 2222170-2227196 bp 2 RT 2: 2367903-2371414 bp Neighborhood of RT #1 [2222170, 2227196] PHA02517 InsE RVT-GII GIIM UPF0236 Neighborhood of RT #2 [2367903, 2371545] COG4709 RVT-GII CdaR Polbeta Feature: gene Location: 2222170-2223042 bp Ori: AKX95076.1 Feature: domain Description: PHA02517 Location: 2222320-2222998 bp Feature: domain Description: PHA0251 7 Location: 2222320-2222998 bp Feature: gene Location: 2223032-2223322 bp Ori: AKX95077.1 Feature: domain Description: InsE Location: 2223041-2223224 bp Feature: domain Description: InsE Location: 2223041 -2223224 bp Feature: gene Location: 2223870-2225105 bp Ori: AKX95078.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2224125-2224818 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22241 25-222481 8 bp Feature: domain Description: GIIM Note: maturase Location: 2224899-2225085 bp Feature: domain Description: GIIM Note: maturase Location: 2224899-2225085 bp Feature: gene Location: 2225184-2226614 bp Ori: AKX95079.1 Feature: domain Description: UPF0236 Location: 2225253-2226513 bp Feature: domain Description: UPF0236 Location: 2225253-222651 3 bp Feature: gene Location: 2226585-2227196 bp Feature: gene Location: 2367903-2368385 bp Ori: AKX95203.1 Feature: domain Description: COG4709 Location: 2367936-2368311 bp Feature: domain Description: COG4709 Location: 2367936-236831 1 bp Feature: gene Location: 2368385-2368501 bp Feature: gene Location: 2369048-2369176 bp Ori: AKX95205.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2369051-2369147 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2369051 -23691 47 bp Feature: gene Location: 2369323-2370495 bp Ori: AKX95206.1 Gene: cdaR3 Feature: domain Description: CdaR Location: 2369338-2370475 bp Feature: domain Description: CdaR Location: 2369338-2370475 bp Feature: gene Location: 2371099-2371545 bp Ori: AKX95207.1 Feature: domain Description: Polbeta Location: 2371135-2371414 bp Feature: domain Description: Polbeta Location: 2371 1 35-2371 41 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), RVT-GII, GIIM (pfam08388), UPF0236 (pfam06782), COG4709 (Uncharacterized membrane protein ), CdaR (COG3835), Polbeta (pfam18765)