myRT

myRT report for GCA_001267435.1_ASM126743v1

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Seq: CP012370.1 Moorella thermoacetica strain DSM 2955, complete genome (2623349 bp)
Overview 1 RT 1: 2317955-2322981 bp 2 RT 2: 2463688-2467199 bp Neighborhood of RT #1 [2317955, 2322981] PHA02517 InsE RVT-GII GIIM UPF0236 Neighborhood of RT #2 [2463688, 2467330] COG4709 RVT-GII CdaR Polbeta Feature: gene Location: 2317955-2318827 bp Ori: AKX97702.1 Feature: domain Description: PHA02517 Location: 2318105-2318783 bp Feature: domain Description: PHA0251 7 Location: 231 81 05-231 8783 bp Feature: gene Location: 2318817-2319107 bp Ori: AKX97703.1 Feature: domain Description: InsE Location: 2318826-2319009 bp Feature: domain Description: InsE Location: 231 8826-231 9009 bp Feature: gene Location: 2319655-2320890 bp Ori: AKX97704.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2319910-2320603 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 231 991 0-2320603 bp Feature: domain Description: GIIM Note: maturase Location: 2320684-2320870 bp Feature: domain Description: GIIM Note: maturase Location: 2320684-2320870 bp Feature: gene Location: 2320969-2322399 bp Ori: AKX97705.1 Feature: domain Description: UPF0236 Location: 2321038-2322298 bp Feature: domain Description: UPF0236 Location: 2321 038-2322298 bp Feature: gene Location: 2322370-2322981 bp Feature: gene Location: 2463688-2464170 bp Ori: AKX97828.1 Feature: domain Description: COG4709 Location: 2463721-2464096 bp Feature: domain Description: COG4709 Location: 2463721 -2464096 bp Feature: gene Location: 2464170-2464286 bp Feature: gene Location: 2464833-2464961 bp Ori: AKX97830.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2464836-2464932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2464836-2464932 bp Feature: gene Location: 2465108-2466280 bp Ori: AKX97831.1 Gene: cdaR2 Feature: domain Description: CdaR Location: 2465123-2466260 bp Feature: domain Description: CdaR Location: 24651 23-2466260 bp Feature: gene Location: 2466884-2467330 bp Ori: AKX97832.1 Feature: domain Description: Polbeta Location: 2466920-2467199 bp Feature: domain Description: Polbeta Location: 2466920-24671 99 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), RVT-GII, GIIM (pfam08388), UPF0236 (pfam06782), COG4709 (Uncharacterized membrane protein ), CdaR (COG3835), Polbeta (pfam18765)