myRT

myRT report for GCA_001267885.1_ASM126788v1

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Seq: CP012382.1 Streptomyces ambofaciens ATCC 23877, complete genome (8303940 bp)
Overview 1 RT 1: 4991412-4997257 bp Neighborhood of RT #1 [4991412, 4997262] PRK05578 deoA RVT_N RVT-GII GIIM HNH DUF820 YfdV Feature: gene Location: 4991412-4991804 bp Ori: AKZ57756.1 Gene: cdd Feature: domain Description: PRK05578 Location: 4991427-4991796 bp Feature: domain Description: PRK05578 Location: 4991 427-4991 796 bp Feature: gene Location: 4991842-4993125 bp Ori: AKZ57757.1 Gene: deoA Feature: domain Description: deoA Location: 4991851-4993120 bp Feature: domain Description: deoA Location: 4991 851 -49931 20 bp Feature: gene Location: 4993874-4995658 bp Ori: AKZ57758.1 Feature: domain Description: RVT_N Location: 4993961-4994204 bp Feature: domain Description: RVT_N Location: 4993961 -4994204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4994258-4994906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4994258-4994906 bp Feature: domain Description: GIIM Note: maturase Location: 4994957-4995185 bp Feature: domain Description: GIIM Note: maturase Location: 4994957-49951 85 bp Feature: domain Description: HNH Note: nucleases Location: 4995518-4995617 bp Feature: domain Description: HNH Note: nucleases Location: 499551 8-499561 7 bp Feature: gene Location: 4995642-4996334 bp Ori: AKZ57759.1 Feature: domain Description: DUF820 Location: 4995843-4996278 bp Feature: domain Description: DUF820 Location: 4995843-4996278 bp Feature: gene Location: 4996336-4997262 bp Ori: AKZ57760.1 Feature: domain Description: YfdV Location: 4996354-4997257 bp Feature: domain Description: YfdV Location: 4996354-4997257 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05578 (cytidine deaminase; Validated), deoA (PRK05820), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), DUF820, YfdV (COG0679)