myRT

myRT report for GCA_001272635.1_ASM127263v1

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Seq: CP011419.1 Streptococcus suis strain NSUI002, complete genome (2255345 bp)
Overview 1 RT 1: 1089522-1095282 bp 2 RT 2: 1144087-1154580 bp 3 RT 3: 1160519-1170064 bp Neighborhood of RT #1 [1089522, 1095647] PRK08581 RVT_N RVT-GII GIIM Neighborhood of RT #2 [1144087, 1154580] RVT-GII Intron_maturas2 HNHc N6_Mtase COG4646 Neighborhood of RT #3 [1160519, 1170111] AbiEii PRK06149 Phage_lysozyme2 PRK08581 RVT_N RVT-GII GIIM PrgI TrbL Feature: gene Location: 1089522-1089737 bp Feature: gene Location: 1089748-1092969 bp Ori: ALA28731.1 Feature: domain Description: PRK08581 Location: 1092628-1092958 bp Feature: domain Description: PRK08581 Location: 1 092628-1 092958 bp Feature: gene Location: 1093974-1095647 bp Ori: ALA28732.1 Feature: domain Description: RVT_N Location: 1094046-1094286 bp Feature: domain Description: RVT_N Location: 1 094046-1 094286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1094334-1094994 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 094334-1 094994 bp Feature: domain Description: GIIM Note: maturase Location: 1095063-1095282 bp Feature: domain Description: GIIM Note: maturase Location: 1 095063-1 095282 bp Feature: gene Location: 1144087-1144377 bp Feature: gene Location: 1144391-1144690 bp Feature: gene Location: 1146242-1148020 bp Ori: ALA28784.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1146503-1147295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 46503-1 1 47295 bp Feature: domain Description: Intron_maturas2 Location: 1147400-1147631 bp Feature: domain Description: Intron_maturas2 Location: 1 1 47400-1 1 47631 bp Feature: domain Description: HNHc Note: nucleases Location: 1147796-1147982 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 47796-1 1 47982 bp Feature: gene Location: 1148518-1153980 bp Ori: ALA28785.1 Feature: domain Description: N6_Mtase Location: 1150534-1151122 bp Feature: domain Description: N6_Mtase Location: 1 1 50534-1 1 51 1 22 bp Feature: domain Description: COG4646 Location: 1151713-1153837 bp Feature: domain Description: COG4646 Location: 1 1 51 71 3-1 1 53837 bp Feature: gene Location: 1154029-1154580 bp Feature: gene Location: 1160519-1161364 bp Ori: ALA28790.1 Feature: domain Description: AbiEii Location: 1160618-1161293 bp Feature: domain Description: AbiEii Location: 1 1 6061 8-1 1 61 293 bp Feature: gene Location: 1161426-1164227 bp Ori: ALA28791.1 Feature: domain Description: PRK06149 Location: 1162851-1163112 bp Feature: domain Description: PRK061 49 Location: 1 1 62851 -1 1 631 1 2 bp Feature: domain Description: Phage_lysozyme2 Location: 1163223-1163736 bp Feature: domain Description: Phage_lysozyme2 Location: 1 1 63223-1 1 63736 bp Feature: domain Description: PRK08581 Location: 1163853-1164189 bp Feature: domain Description: PRK08581 Location: 1 1 63853-1 1 641 89 bp Feature: gene Location: 1165196-1166869 bp Ori: ALA28792.1 Feature: domain Description: RVT_N Location: 1165268-1165508 bp Feature: domain Description: RVT_N Location: 1 1 65268-1 1 65508 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1165556-1166216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 65556-1 1 6621 6 bp Feature: domain Description: GIIM Note: maturase Location: 1166285-1166504 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 66285-1 1 66504 bp Feature: gene Location: 1168848-1169201 bp Ori: ALA28793.1 Feature: domain Description: PrgI Location: 1168860-1169133 bp Feature: domain Description: PrgI Location: 1 1 68860-1 1 691 33 bp Feature: gene Location: 1169263-1170111 bp Ori: ALA28794.1 Feature: domain Description: TrbL Location: 1169617-1170064 bp Feature: domain Description: TrbL Location: 1 1 6961 7-1 1 70064 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08581 (amidase domain-containing protein), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Intron_maturas2 (pfam01348), HNHc (smart00507), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), AbiEii (pfam08843), PRK06149 (aminotransferase)
Phage_lysozyme2 (pfam18013), PrgI (pfam12666), TrbL (pfam04610)