myRT

myRT report for GCA_001307155.1_ASM130715v1

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Seq: CP012830.1 Pseudomonas fluorescens strain FW300-N2E3, complete genome (6391871 bp)
Overview 1 RT 1: 216861-220642 bp 2 RT 2: 4543522-4549234 bp Neighborhood of RT #1 [216861, 220650] HTH_XRE Gly-zipper_YMGG Gly-zipper_YMGG RVT-GII GIIM YbjQ_1 Neighborhood of RT #2 [4543522, 4549234] DadA RVT-GII GIIM NADAR Feature: gene Location: 216861-217187 bp Ori: ALH99678.1 Feature: domain Description: HTH_XRE Location: 217020-217179 bp Feature: domain Description: HTH_XRE Location: 21 7020-21 71 79 bp Feature: gene Location: 217319-217663 bp Ori: ALH99679.1 Feature: domain Description: Gly-zipper_YMGG Location: 217391-217514 bp Feature: domain Description: Gly-zipper_YMGG Location: 21 7391 -21 751 4 bp Feature: domain Description: Gly-zipper_YMGG Location: 217532-217649 bp Feature: domain Description: Gly-zipper_YMGG Location: 21 7532-21 7649 bp Feature: gene Location: 218056-219477 bp Ori: ALI04970.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 218413-219028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 841 3-21 9028 bp Feature: domain Description: GIIM Note: maturase Location: 219082-219310 bp Feature: domain Description: GIIM Note: maturase Location: 21 9082-21 931 0 bp Feature: gene Location: 219950-220141 bp Feature: gene Location: 220330-220650 bp Ori: ALH99681.1 Feature: domain Description: YbjQ_1 Location: 220333-220642 bp Feature: domain Description: YbjQ_1 Location: 220333-220642 bp Feature: gene Location: 4543522-4544805 bp Ori: ALI03378.1 Feature: domain Description: DadA Location: 4543609-4544740 bp Feature: domain Description: DadA Location: 4543609-4544740 bp Feature: gene Location: 4545369-4545785 bp Feature: gene Location: 4546077-4547498 bp Ori: ALI05120.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4546434-4547049 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4546434-4547049 bp Feature: domain Description: GIIM Note: maturase Location: 4547103-4547331 bp Feature: domain Description: GIIM Note: maturase Location: 45471 03-4547331 bp Feature: gene Location: 4548073-4548618 bp Ori: ALI05121.1 Feature: domain Description: NADAR Location: 4548136-4548610 bp Feature: domain Description: NADAR Location: 45481 36-454861 0 bp Feature: gene Location: 4548890-4549234 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), Gly-zipper_YMGG (pfam13441), RVT-GII, GIIM (pfam08388), YbjQ_1 (pfam01906), DadA (COG0665), NADAR (cl21532)